BLASTX nr result

ID: Cimicifuga21_contig00016240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016240
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...   374   e-101
emb|CBI38350.3| unnamed protein product [Vitis vinifera]              374   e-101
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]   374   e-101
emb|CBI36646.3| unnamed protein product [Vitis vinifera]              365   8e-99
ref|XP_002514795.1| Protein ariadne-1, putative [Ricinus communi...   365   8e-99

>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
            vinifera]
          Length = 652

 Score =  374 bits (959), Expect = e-101
 Identities = 169/260 (65%), Positives = 196/260 (75%), Gaps = 12/260 (4%)
 Frame = +3

Query: 42   GCMQLRVGIPF-------DMVDKLVSDADKEKYSRYLVICYVENKLNIKWCPAPGCDYAV 200
            GC+ LR   P        DM++ L SD DKEKYSRY +  Y+E+    KWCPAPGCDYAV
Sbjct: 239  GCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAV 298

Query: 201  DFVGDTGSYDVSCNCAHSFCWNCVEDTHRPVDCDTVAKWIFKNTDEAENVNWILANSKAC 380
            DF+  +GSYDVSC C++SFCWNC E+ HRPVDC TVAKWI KN+ E+EN+NWILANSK C
Sbjct: 299  DFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPC 358

Query: 381  PKCKRPIQKNDGCMHMTCRSPCDHQFCWLCLGSWKKHDGS-----ACNGYRRTIKEGGIN 545
            PKCKRPI+KN GCMH+TC  PC  +FCWLCLG+W  H        ACN Y    +EG  +
Sbjct: 359  PKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYD 418

Query: 546  ETEKRRDMAKKMLDRYTHYYERWAANHSSRKKAMMDLQQMQTVNIDQLYARQCQPVSQLK 725
            E EKRRDMAK  L+RYTHYYERWA N SSR+KA+ DLQQMQTVNI++L  +QCQP SQLK
Sbjct: 419  EAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLK 478

Query: 726  FITEAWQQIIECRCVLKWTY 785
            FITEAW QI+ECR VLKWTY
Sbjct: 479  FITEAWLQIVECRRVLKWTY 498


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  374 bits (959), Expect = e-101
 Identities = 169/260 (65%), Positives = 196/260 (75%), Gaps = 12/260 (4%)
 Frame = +3

Query: 42  GCMQLRVGIPF-------DMVDKLVSDADKEKYSRYLVICYVENKLNIKWCPAPGCDYAV 200
           GC+ LR   P        DM++ L SD DKEKYSRY +  Y+E+    KWCPAPGCDYAV
Sbjct: 168 GCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAV 227

Query: 201 DFVGDTGSYDVSCNCAHSFCWNCVEDTHRPVDCDTVAKWIFKNTDEAENVNWILANSKAC 380
           DF+  +GSYDVSC C++SFCWNC E+ HRPVDC TVAKWI KN+ E+EN+NWILANSK C
Sbjct: 228 DFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPC 287

Query: 381 PKCKRPIQKNDGCMHMTCRSPCDHQFCWLCLGSWKKHDGS-----ACNGYRRTIKEGGIN 545
           PKCKRPI+KN GCMH+TC  PC  +FCWLCLG+W  H        ACN Y    +EG  +
Sbjct: 288 PKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYD 347

Query: 546 ETEKRRDMAKKMLDRYTHYYERWAANHSSRKKAMMDLQQMQTVNIDQLYARQCQPVSQLK 725
           E EKRRDMAK  L+RYTHYYERWA N SSR+KA+ DLQQMQTVNI++L  +QCQP SQLK
Sbjct: 348 EAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLK 407

Query: 726 FITEAWQQIIECRCVLKWTY 785
           FITEAW QI+ECR VLKWTY
Sbjct: 408 FITEAWLQIVECRRVLKWTY 427


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score =  374 bits (959), Expect = e-101
 Identities = 169/260 (65%), Positives = 196/260 (75%), Gaps = 12/260 (4%)
 Frame = +3

Query: 42  GCMQLRVGIPF-------DMVDKLVSDADKEKYSRYLVICYVENKLNIKWCPAPGCDYAV 200
           GC+ LR   P        DM++ L SD DKEKYSRY +  Y+E+    KWCPAPGCDYAV
Sbjct: 175 GCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAV 234

Query: 201 DFVGDTGSYDVSCNCAHSFCWNCVEDTHRPVDCDTVAKWIFKNTDEAENVNWILANSKAC 380
           DF+  +GSYDVSC C++SFCWNC E+ HRPVDC TVAKWI KN+ E+EN+NWILANSK C
Sbjct: 235 DFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPC 294

Query: 381 PKCKRPIQKNDGCMHMTCRSPCDHQFCWLCLGSWKKHDGS-----ACNGYRRTIKEGGIN 545
           PKCKRPI+KN GCMH+TC  PC  +FCWLCLG+W  H        ACN Y    +EG  +
Sbjct: 295 PKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYD 354

Query: 546 ETEKRRDMAKKMLDRYTHYYERWAANHSSRKKAMMDLQQMQTVNIDQLYARQCQPVSQLK 725
           E EKRRDMAK  L+RYTHYYERWA N SSR+KA+ DLQQMQTVNI++L  +QCQP SQLK
Sbjct: 355 EAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLK 414

Query: 726 FITEAWQQIIECRCVLKWTY 785
           FITEAW QI+ECR VLKWTY
Sbjct: 415 FITEAWLQIVECRRVLKWTY 434


>emb|CBI36646.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  365 bits (936), Expect = 8e-99
 Identities = 163/260 (62%), Positives = 194/260 (74%), Gaps = 12/260 (4%)
 Frame = +3

Query: 42  GCMQLRVGIPF-------DMVDKLVSDADKEKYSRYLVICYVENKLNIKWCPAPGCDYAV 200
           GC+ LR   P        DM++ L SD D EKYSRYL+  Y+E+    KWCPAPGC+YAV
Sbjct: 125 GCLMLRCPDPSCRAAVGQDMINLLASDEDNEKYSRYLLRSYIEDNRKTKWCPAPGCEYAV 184

Query: 201 DFVGDTGSYDVSCNCAHSFCWNCVEDTHRPVDCDTVAKWIFKNTDEAENVNWILANSKAC 380
           +FV  +GSYDV+C C++ FCWNC E+ HRPVDC TVAKWI KN+ E+EN+NWILANSK C
Sbjct: 185 EFVAGSGSYDVACQCSYGFCWNCTEEAHRPVDCSTVAKWILKNSAESENMNWILANSKPC 244

Query: 381 PKCKRPIQKNDGCMHMTCRSPCDHQFCWLCLGSWKKHDGS-----ACNGYRRTIKEGGIN 545
           PKCKRPI+KN GCMH+TC  PC  +FCWLCLG+W  H        ACN Y    +EG  +
Sbjct: 245 PKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYD 304

Query: 546 ETEKRRDMAKKMLDRYTHYYERWAANHSSRKKAMMDLQQMQTVNIDQLYARQCQPVSQLK 725
           ETE+RR+MAK  L+RYTHYYERWA N SSR+KA+ DL QMQ VNI++L  +QCQP SQLK
Sbjct: 305 ETERRREMAKNSLERYTHYYERWATNQSSRQKALADLHQMQNVNIEKLSDKQCQPESQLK 364

Query: 726 FITEAWQQIIECRCVLKWTY 785
           FITEAW QI+ECR VLKWTY
Sbjct: 365 FITEAWLQIVECRRVLKWTY 384


>ref|XP_002514795.1| Protein ariadne-1, putative [Ricinus communis]
           gi|223545846|gb|EEF47349.1| Protein ariadne-1, putative
           [Ricinus communis]
          Length = 513

 Score =  365 bits (936), Expect = 8e-99
 Identities = 163/260 (62%), Positives = 195/260 (75%), Gaps = 12/260 (4%)
 Frame = +3

Query: 42  GCMQLRVGIPF-------DMVDKLVSDADKEKYSRYLVICYVENKLNIKWCPAPGCDYAV 200
           GC+ LR   P        DM+++L SD DKEKY RY +  Y+E+    KWCPAPGCDYAV
Sbjct: 100 GCLMLRCPDPSCSAAVGQDMINELASDEDKEKYFRYFIRSYIEDNRKTKWCPAPGCDYAV 159

Query: 201 DFVGDTGSYDVSCNCAHSFCWNCVEDTHRPVDCDTVAKWIFKNTDEAENVNWILANSKAC 380
           DF+  +GSYDV+C C++SFCWNC E+ HRPVDC TV+KWI KN+ E+EN+NWILANSK C
Sbjct: 160 DFIVGSGSYDVTCRCSYSFCWNCTEEAHRPVDCGTVSKWILKNSAESENMNWILANSKPC 219

Query: 381 PKCKRPIQKNDGCMHMTCRSPCDHQFCWLCLGSWKKHDGS-----ACNGYRRTIKEGGIN 545
           PKCKRPI+KN GCMH+TC  PC  +FCWLCLG+W  H        ACN Y    +EG  +
Sbjct: 220 PKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYD 279

Query: 546 ETEKRRDMAKKMLDRYTHYYERWAANHSSRKKAMMDLQQMQTVNIDQLYARQCQPVSQLK 725
           E EKRR+MAK  L+RYTHYYERWA N SSR+KA+ DLQQMQTV++++L   QCQP SQLK
Sbjct: 280 EAEKRREMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVHLEKLSDIQCQPESQLK 339

Query: 726 FITEAWQQIIECRCVLKWTY 785
           FITEAW QI+ECR VLKWTY
Sbjct: 340 FITEAWLQIVECRRVLKWTY 359


Top