BLASTX nr result

ID: Cimicifuga21_contig00016185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016185
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94339.1| unknown [Populus trichocarpa]                          173   5e-41
ref|XP_003542997.1| PREDICTED: uncharacterized protein At4g08330...   173   6e-41
ref|XP_004161170.1| PREDICTED: uncharacterized protein At4g08330...   172   8e-41
gb|ACU20615.1| unknown [Glycine max]                                  171   2e-40
ref|XP_003544689.1| PREDICTED: uncharacterized protein At4g08330...   171   3e-40

>gb|ABK94339.1| unknown [Populus trichocarpa]
          Length = 164

 Score =  173 bits (439), Expect = 5e-41
 Identities = 94/158 (59%), Positives = 108/158 (68%), Gaps = 2/158 (1%)
 Frame = +3

Query: 291 QDSYHNGSHDQPLSSSQ-SHRDVNYSCGSCGYALNLSSLNRNTSTISSKYGKSMKRGIIP 467
           +++Y NG+H    SSS  SHR V+YSCG CGY LNLSS NRNTSTI SKYGKS+KRG I 
Sbjct: 8   REAYLNGNHHHSFSSSSASHRHVSYSCGICGYELNLSSSNRNTSTIGSKYGKSIKRGKIS 67

Query: 468 FLSIDESRFTQMDEFQCLPYFVSKGMWGLFRRRTKLLCRKCGNHVGTAYEENTSFXXXXX 647
           F  IDESRFTQ+DEFQC P+F SK   GLFR+RT LLCRKCGNH+G AY +  S      
Sbjct: 68  FFFIDESRFTQVDEFQCFPFF-SKNSLGLFRQRTALLCRKCGNHIGIAYADEAS--AYPL 124

Query: 648 XXXXXXXXXXXXXXTRRKYDVRIRALQPSS-EESGVPL 758
                          RRKYDV+IRALQPSS E+  +PL
Sbjct: 125 VADGSDSSSVSEVFKRRKYDVKIRALQPSSAEQFSIPL 162


>ref|XP_003542997.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
           [Glycine max]
          Length = 158

 Score =  173 bits (438), Expect = 6e-41
 Identities = 93/161 (57%), Positives = 109/161 (67%), Gaps = 1/161 (0%)
 Frame = +3

Query: 279 SMYNQDSYHNGSHDQPLSSSQSHRDVNYSCGSCGYALNLSSLNRNTSTISSKYGKSMKRG 458
           S + +D + N ++     S  S RDV YSCG+CGY LNLSS NRNT++I SKYGKS+KRG
Sbjct: 4   SAFKRDGHFNRTY-----SCSSQRDVRYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRG 58

Query: 459 IIPFLSIDESRFTQMDEFQCLPYFVSKGMWGLFRRRTKLLCRKCGNHVGTAYEENTSFXX 638
           II F SID SRFTQ+DE QC+P+F  K  WGLFRRRTKLLCRKCGNH+G AY   TS   
Sbjct: 59  IISFFSIDLSRFTQVDEIQCVPHF-DKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFP 117

Query: 639 XXXXXXXXXXXXXXXXXTRRKYDVRIRALQP-SSEESGVPL 758
                            T  KYD+RIRALQP SSEESG+P+
Sbjct: 118 LVTDGAESSPSSKVVSHT--KYDIRIRALQPSSSEESGIPV 156


>ref|XP_004161170.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
           [Cucumis sativus]
          Length = 168

 Score =  172 bits (437), Expect = 8e-41
 Identities = 92/162 (56%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
 Frame = +3

Query: 294 DSYHNGSHDQPLSS-----SQSHRDVNYSCGSCGYALNLSSLNRNTSTISSKYGKSMKRG 458
           D Y +G+H Q  SS     S S RDV YSCG+CGY LNLSS+NRNTSTI SKYGKS+KRG
Sbjct: 9   DDYAHGTHVQSFSSASLFPSSSRRDVYYSCGACGYELNLSSINRNTSTIGSKYGKSIKRG 68

Query: 459 IIPFLSIDESRFTQMDEFQCLPYFVSKGMWGLFRRRTKLLCRKCGNHVGTAYEENTSFXX 638
           II FL+IDESRFTQ+DE QC+P+F SK  WGLFRRR KLLCRKCGN++G A+  +T+   
Sbjct: 69  IISFLNIDESRFTQVDELQCVPHF-SKNSWGLFRRRIKLLCRKCGNYIGNAHSNHTASSP 127

Query: 639 XXXXXXXXXXXXXXXXXTRRKYDVRIRALQPSSEESGVPLIM 764
                               KY+V+IRALQPSS     P I+
Sbjct: 128 LVSDGSDSSSLPNEVSRC-MKYEVKIRALQPSSSNEFEPSII 168


>gb|ACU20615.1| unknown [Glycine max]
          Length = 158

 Score =  171 bits (433), Expect = 2e-40
 Identities = 92/161 (57%), Positives = 109/161 (67%), Gaps = 1/161 (0%)
 Frame = +3

Query: 279 SMYNQDSYHNGSHDQPLSSSQSHRDVNYSCGSCGYALNLSSLNRNTSTISSKYGKSMKRG 458
           S + +D + N ++     S  S RDV YSCG+CGY LNLSS NRNT++I SKYGKS+KRG
Sbjct: 4   SAFKRDGHFNRTY-----SCSSQRDVRYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRG 58

Query: 459 IIPFLSIDESRFTQMDEFQCLPYFVSKGMWGLFRRRTKLLCRKCGNHVGTAYEENTSFXX 638
           II F SID SRFTQ+DE QC+P+F  K  WGLFRRRTKLLCRKCG+H+G AY   TS   
Sbjct: 59  IISFFSIDLSRFTQVDEIQCVPHF-DKHSWGLFRRRTKLLCRKCGSHIGNAYNGYTSSFP 117

Query: 639 XXXXXXXXXXXXXXXXXTRRKYDVRIRALQP-SSEESGVPL 758
                            T  KYD+RIRALQP SSEESG+P+
Sbjct: 118 LVTDGAESSPSSKVVSHT--KYDIRIRALQPSSSEESGIPV 156


>ref|XP_003544689.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
           [Glycine max]
          Length = 158

 Score =  171 bits (432), Expect = 3e-40
 Identities = 91/158 (57%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
 Frame = +3

Query: 288 NQDSYHNGSHDQPLSSSQSHRDVNYSCGSCGYALNLSSLNRNTSTISSKYGKSMKRGIIP 467
           +  ++  G H     S  S RDV YSCG+CGY LNLSS NRNT++I SKYGKS+KRGII 
Sbjct: 2   DDSAFKRGGHFNRTYSCSSQRDVCYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIIS 61

Query: 468 FLSIDESRFTQMDEFQCLPYFVSKGMWGLFRRRTKLLCRKCGNHVGTAYEENTSFXXXXX 647
           F SID SRFTQ+DE QC+P+F  K  WGLFRRRTKLLCRKCGNH+G AY   TS      
Sbjct: 62  FFSIDLSRFTQVDEIQCVPHF-DKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVS 120

Query: 648 XXXXXXXXXXXXXXTRRKYDVRIRALQP-SSEESGVPL 758
                         T  KYD+RI ALQP SSEESG+P+
Sbjct: 121 DGAESSPSSKVVSHT--KYDIRICALQPSSSEESGIPV 156


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