BLASTX nr result

ID: Cimicifuga21_contig00016184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016184
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis...   128   5e-28
emb|CAN64836.1| hypothetical protein VITISV_030374 [Vitis vinifera]   128   5e-28
ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [...   121   5e-26
ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycin...   121   5e-26
ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26

>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
           gi|297739985|emb|CBI30167.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/72 (90%), Positives = 69/72 (95%)
 Frame = -2

Query: 217 MGSNSGASNSYDFSFKILLIGDSAVGKSSLLVSFISSTVEDLSPTIGVDFKIKQLIVGGK 38
           MGS+SG S+SYD SFKILLIGDSAVGKSSLLVSFISS+VEDL+PTIGVDFKIKQL VGGK
Sbjct: 1   MGSSSGQSSSYDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 60

Query: 37  RLKLTIWDTAGQ 2
           RLKLTIWDTAGQ
Sbjct: 61  RLKLTIWDTAGQ 72


>emb|CAN64836.1| hypothetical protein VITISV_030374 [Vitis vinifera]
          Length = 240

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/75 (86%), Positives = 70/75 (93%)
 Frame = -2

Query: 226 DLLMGSNSGASNSYDFSFKILLIGDSAVGKSSLLVSFISSTVEDLSPTIGVDFKIKQLIV 47
           DLLMGS+SG S+SYD SFKILLIGDSAVGKSSLLVSFISS+VEDL+PTIGVDFKIKQL V
Sbjct: 40  DLLMGSSSGQSSSYDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTV 99

Query: 46  GGKRLKLTIWDTAGQ 2
           GGKRLKLTIWDT  +
Sbjct: 100 GGKRLKLTIWDTGAK 114


>ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 211

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/72 (86%), Positives = 65/72 (90%)
 Frame = -2

Query: 217 MGSNSGASNSYDFSFKILLIGDSAVGKSSLLVSFISSTVEDLSPTIGVDFKIKQLIVGGK 38
           M S+SG S+ YD SFKILLIGDS VGKSSLLVSFISS+VEDLSPTIGVDFKIK L VGGK
Sbjct: 1   MSSSSGQSSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGK 60

Query: 37  RLKLTIWDTAGQ 2
           RLKLTIWDTAGQ
Sbjct: 61  RLKLTIWDTAGQ 72


>ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycine max]
           gi|255633056|gb|ACU16883.1| unknown [Glycine max]
          Length = 194

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/72 (86%), Positives = 65/72 (90%)
 Frame = -2

Query: 217 MGSNSGASNSYDFSFKILLIGDSAVGKSSLLVSFISSTVEDLSPTIGVDFKIKQLIVGGK 38
           M S+SG S+ YD SFKILLIGDS VGKSSLLVSFISS+VEDLSPTIGVDFKIK L VGGK
Sbjct: 1   MSSSSGQSSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGK 60

Query: 37  RLKLTIWDTAGQ 2
           RLKLTIWDTAGQ
Sbjct: 61  RLKLTIWDTAGQ 72


>ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|222833576|gb|EEE72053.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/73 (86%), Positives = 68/73 (93%), Gaps = 1/73 (1%)
 Frame = -2

Query: 217 MGSNSG-ASNSYDFSFKILLIGDSAVGKSSLLVSFISSTVEDLSPTIGVDFKIKQLIVGG 41
           MGS+SG +S SYD SFKILLIGDS VGKSSLLVSFISS+VED++PTIGVDFKIKQL VGG
Sbjct: 1   MGSSSGQSSGSYDLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGG 60

Query: 40  KRLKLTIWDTAGQ 2
           KRLKLTIWDTAGQ
Sbjct: 61  KRLKLTIWDTAGQ 73


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