BLASTX nr result

ID: Cimicifuga21_contig00016181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016181
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36061.1| unknown [Lotus japonicus]                               57   2e-06
ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>gb|AFK36061.1| unknown [Lotus japonicus]
          Length = 237

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = +3

Query: 303 IDKVRQICNSVVSAALGNLISAILTFSFAVVGTLLG 410
           +DKV+QICN  +SA +GN++SAILTF FA+VGTLLG
Sbjct: 22  VDKVKQICNLAISAIIGNILSAILTFCFALVGTLLG 57


>ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|222836721|gb|EEE75114.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 300 WIDKVRQICNSVVSAALGNLISAILTFSFAVVGTLLGA 413
           ++DKV+++CN VVSA +GN+ SAI TF FA+VGTLLGA
Sbjct: 10  FVDKVKEVCNFVVSAIIGNIFSAIFTFFFALVGTLLGA 47


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