BLASTX nr result

ID: Cimicifuga21_contig00016178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016178
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308266.1| predicted protein [Populus trichocarpa] gi|2...   159   5e-37
ref|XP_002514067.1| monooxygenase, putative [Ricinus communis] g...   144   1e-32
ref|XP_004170730.1| PREDICTED: RING-H2 finger protein ATL1-like ...   142   6e-32
ref|XP_004144121.1| PREDICTED: RING-H2 finger protein ATL1-like ...   140   2e-31
ref|XP_002521344.1| conserved hypothetical protein [Ricinus comm...   114   1e-23

>ref|XP_002308266.1| predicted protein [Populus trichocarpa] gi|222854242|gb|EEE91789.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  159 bits (401), Expect = 5e-37
 Identities = 79/148 (53%), Positives = 102/148 (68%), Gaps = 3/148 (2%)
 Frame = +3

Query: 12  DAPANPFMPPPLHKANLSLFYYGLVVVGSTAVVLALYNLIVVRVCAHHRRRQLLQMSTQS 191
           ++P  P  PPP HK+NL + YYGLVVVG+ A+VLA+YNLI+++ CA    R     +  +
Sbjct: 11  ESPPPPPPPPPPHKSNLPMLYYGLVVVGTAAIVLAVYNLIIIKWCAQRGGRSGQGPNVFT 70

Query: 192 VGFPRQSFENSSAQLFSTFKYSTKETYAHI---SDNECSVCLSNFEDGEDVRQLTRCKHC 362
                QSFE+S++ L S+FKY   +        S  EC+VCLS FE+GE+VRQL RCKH 
Sbjct: 71  EVTASQSFEHSNSNLPSSFKYKKGKIDGDQDQGSGYECAVCLSAFEEGEEVRQLPRCKHS 130

Query: 363 FHASCIDMWLYSHSDCPLCRAFVGPPVS 446
           FHA CIDMWLYSHSDCPLCR+ V PP++
Sbjct: 131 FHAPCIDMWLYSHSDCPLCRSSVDPPLA 158


>ref|XP_002514067.1| monooxygenase, putative [Ricinus communis]
           gi|223546523|gb|EEF48021.1| monooxygenase, putative
           [Ricinus communis]
          Length = 468

 Score =  144 bits (364), Expect = 1e-32
 Identities = 79/177 (44%), Positives = 106/177 (59%), Gaps = 10/177 (5%)
 Frame = +3

Query: 3   TMADAPANPFMPPPL--HKANLSLFYYGLVVVGSTAVVLALYNLIVVRVCAHHRRRQLLQ 176
           +M D  +    PPPL   + N+ + YYGLV++G+ A+VLA+YNLI++R C H  R+    
Sbjct: 286 SMGDVSSPYIQPPPLPAQRNNMPMVYYGLVIIGTAAIVLAIYNLIIIRWCTHQHRQDHSS 345

Query: 177 MSTQSVGFPRQSFENSSAQLFSTFKYSTKETYAH---ISDNECSVCLSNFEDGEDVRQLT 347
               +      +   SS+ L ++FKY      A     S  EC+VCLS FEDGE+V++L 
Sbjct: 346 GQGPNRFVEVTTASQSSSNLLTSFKYKKDNLIAKDHGSSHYECAVCLSVFEDGEEVKKLP 405

Query: 348 RCKHCFHASCIDMWLYSHSDCPLCRAFVGP-PVS----HNLVFSEDNSREVLREPSN 503
            C H FHASCIDMWLYSH DCPLCRA V P P S    H++  + DNS+E L   +N
Sbjct: 406 GCNHSFHASCIDMWLYSHYDCPLCRARVDPLPPSFYRRHSVPTASDNSQENLLGGNN 462


>ref|XP_004170730.1| PREDICTED: RING-H2 finger protein ATL1-like [Cucumis sativus]
          Length = 162

 Score =  142 bits (357), Expect = 6e-32
 Identities = 80/167 (47%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
 Frame = +3

Query: 6   MADAPANPFMPPPLHKANLSLFYYGLVVVGSTAVVLALYNLIVVRVCAHHRRRQLLQMST 185
           M+D+  +   P P  K++L + YYGLVVVG+ A+VL LYN IV++ C+ +R R+ +  S 
Sbjct: 1   MSDSSTSTSTPHPA-KSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRRMAGSY 59

Query: 186 QSVGFPRQSFENSSAQLFSTFKYSTKETYAHISD---NECSVCLSNFEDGEDVRQLTRCK 356
           + +    +SF++S     S+FK+  K   A   +   NEC+VCLS FEDGE+V++L RC 
Sbjct: 60  EEMMNSSRSFQSS----LSSFKFK-KVAGAGAEEGNGNECAVCLSAFEDGEEVKKLPRCT 114

Query: 357 HCFHASCIDMWLYSHSDCPLCRAFVGPPVSHNLVF-SEDNSREVLRE 494
           H FHASCIDMWLYSHSDCPLCRA V     H      E+NS  VL E
Sbjct: 115 HTFHASCIDMWLYSHSDCPLCRAPVAGLSRHEATAEQEENSGHVLLE 161


>ref|XP_004144121.1| PREDICTED: RING-H2 finger protein ATL1-like [Cucumis sativus]
          Length = 166

 Score =  140 bits (352), Expect = 2e-31
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 8/171 (4%)
 Frame = +3

Query: 6   MADAPANPFMPPPLHKANLSLFYYGLVVVGSTAVVLALYNLIVVRVCAHHRRRQLLQMST 185
           M+D+  +   P P  K++L + YYGLVVVG+ A+VL LYN IV++ C+ +R R+ +  S 
Sbjct: 1   MSDSSTSTSTPHPA-KSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRRMAGSY 59

Query: 186 QSVGFPRQSFENSSAQLFSTFKYSTKETYAHISD---NECSVCLSNFEDGEDVRQLTRCK 356
           + +    +SF++S     S+FK+  K   A   +   NEC+VCLS FEDGE+V++L RC 
Sbjct: 60  EEMMNSSRSFQSS----LSSFKFK-KVAGAGAEEGNGNECAVCLSAFEDGEEVKKLPRCT 114

Query: 357 HCFHASCIDMWLYSHSDCPLCRAFVGPPVS-----HNLVFSEDNSREVLRE 494
           H FHASCIDMWLYSHSDCPLCRA V   V+           E+NS  VL E
Sbjct: 115 HTFHASCIDMWLYSHSDCPLCRAPVAVAVAGRSRHEATAEQEENSGHVLLE 165


>ref|XP_002521344.1| conserved hypothetical protein [Ricinus communis]
           gi|223539422|gb|EEF41012.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score =  114 bits (286), Expect = 1e-23
 Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
 Frame = +3

Query: 60  LSLFYYGLVVVGSTAVVLALYNLIVVRVCAHHRRRQLLQMSTQSVGFPRQSFENSSAQL- 236
           + +  YGLV+ G+ A+  A+Y ++++     H      Q+S Q +  P     + S  L 
Sbjct: 1   MPVILYGLVLFGTIAIAFAVYTMVMLGWRTSHH-----QLSRQELSNPADHKSSVSLNLN 55

Query: 237 ---FSTFKYSTKETYAHI-SDNECSVCLSNFEDGEDVRQLTRCKHCFHASCIDMWLYSHS 404
               STFKY  +   + + S+ EC VCLS+FED E VRQL RCKH FHASCIDMW+YSHS
Sbjct: 56  PYSASTFKYKKRIENSEVPSETECIVCLSDFEDDEYVRQLPRCKHSFHASCIDMWVYSHS 115

Query: 405 DCPLCRAFVGPPVSHNLVFSEDNSREVLREPSNL 506
           DCPLCR  +    S + V + +NS + L +  +L
Sbjct: 116 DCPLCRTPIHRLDSESSVLTIENSFDGLLDTRSL 149


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