BLASTX nr result

ID: Cimicifuga21_contig00016177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016177
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509922.1| conserved hypothetical protein [Ricinus comm...   107   8e-22
ref|XP_002304545.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]              107   1e-21
ref|XP_002451900.1| hypothetical protein SORBIDRAFT_04g009640 [S...   106   2e-21
gb|ABK96351.1| unknown [Populus trichocarpa x Populus deltoides]      105   3e-21

>ref|XP_002509922.1| conserved hypothetical protein [Ricinus communis]
           gi|223549821|gb|EEF51309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 94

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
 Frame = +2

Query: 23  MSEAGFQNSSYKQDELQANGHH--DGSKQRCGGYFQMPLHYPRYKKEDYETMPEWQLDCL 196
           MS     N+++    L+ NGH   +  + +C   FQMPLHYPR+KK DYETMPEW+LDCL
Sbjct: 1   MSGITCSNTAHAVSGLRPNGHQKQENKRDKCS-CFQMPLHYPRFKKGDYETMPEWRLDCL 59

Query: 197 LNQYGLPVTGDVAYKRNFAMGAFLWP 274
           L +YGLP+ GDV  KR FAMGAFLWP
Sbjct: 60  LKEYGLPIVGDVNQKRKFAMGAFLWP 85


>ref|XP_002304545.1| predicted protein [Populus trichocarpa] gi|222841977|gb|EEE79524.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/78 (64%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
 Frame = +2

Query: 47  SSYKQDELQANGH--HDGSKQRCGGYFQMPLHYPRYKKEDYETMPEWQLDCLLNQYGLPV 220
           SS    +L+ NG+  H  SK+     FQMPLHYPRYKK DYETMPEW+LDCLL +YGLP 
Sbjct: 11  SSAMPKDLRPNGYNQHQASKRGTCSCFQMPLHYPRYKKSDYETMPEWRLDCLLKEYGLPA 70

Query: 221 TGDVAYKRNFAMGAFLWP 274
            GD   KR FAMGAFLWP
Sbjct: 71  IGDANQKRKFAMGAFLWP 88


>gb|AEW43293.1| hypothetical protein [Hevea brasiliensis]
          Length = 79

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/66 (71%), Positives = 54/66 (81%)
 Frame = +2

Query: 77  NGHHDGSKQRCGGYFQMPLHYPRYKKEDYETMPEWQLDCLLNQYGLPVTGDVAYKRNFAM 256
           N  H  +K RCG YFQMPLHYPRY   +Y+TMPEW+LDCLL +YGLP+TG+V YKR FAM
Sbjct: 16  NSEH--AKDRCG-YFQMPLHYPRYTHAEYDTMPEWKLDCLLKEYGLPITGNVEYKRKFAM 72

Query: 257 GAFLWP 274
           GAFLWP
Sbjct: 73  GAFLWP 78


>ref|XP_002451900.1| hypothetical protein SORBIDRAFT_04g009640 [Sorghum bicolor]
           gi|241931731|gb|EES04876.1| hypothetical protein
           SORBIDRAFT_04g009640 [Sorghum bicolor]
          Length = 99

 Score =  106 bits (265), Expect = 2e-21
 Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 5/70 (7%)
 Frame = +2

Query: 80  GHHDGSKQRCGG-----YFQMPLHYPRYKKEDYETMPEWQLDCLLNQYGLPVTGDVAYKR 244
           GHH+     CGG      F+MPLHYPRYKK DYE MPEW++DCLL +YGLPV GD+  KR
Sbjct: 27  GHHEQQSSNCGGGSSSSSFRMPLHYPRYKKADYEAMPEWRVDCLLREYGLPVAGDLREKR 86

Query: 245 NFAMGAFLWP 274
            FAMGAFLWP
Sbjct: 87  EFAMGAFLWP 96


>gb|ABK96351.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 92

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/78 (64%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
 Frame = +2

Query: 47  SSYKQDELQANGH--HDGSKQRCGGYFQMPLHYPRYKKEDYETMPEWQLDCLLNQYGLPV 220
           SS    +L+ NG+  H  SK+     FQMPLHYPRYKK DYETMPEW+LDCLL +YGLP 
Sbjct: 11  SSAMPKDLRPNGYNQHQASKRGTCSCFQMPLHYPRYKKCDYETMPEWRLDCLLKEYGLPA 70

Query: 221 TGDVAYKRNFAMGAFLWP 274
            GD   KR FAMGAFLWP
Sbjct: 71  IGDANQKRKFAMGAFLWP 88


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