BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016168
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   213   9e-53
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   181   6e-43
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   171   4e-40
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   170   8e-40
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   168   4e-39

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  213 bits (543), Expect = 9e-53
 Identities = 140/399 (35%), Positives = 200/399 (50%), Gaps = 10/399 (2%)
 Frame = -1

Query: 1342 TLMGNWSELPEEIVDLFVKRLTCVEDFVQFGAVCKPWRSAALGKN---PQPFAPWLMLPT 1172
            T+M +WS++P++ + L  ++L  VED+V+FG VCK W S    K    P   +PWLML  
Sbjct: 917  TVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAE 976

Query: 1171 DDNDNNDEGIRSFYSISPAEEENKEKLIQFPLPQTHRRRCWGSPYGWLITLGFDFNIHLL 992
             +N      IR FYS          K+ +  LP+   + CWGSPYGWL+T+G D ++ LL
Sbjct: 977  KENSE----IRGFYSPLSG------KVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLL 1026

Query: 991  NPLTRIQISLPPQRTLQQLFNHLSEPFDAADPERILGAFLTKFAFXXXXXXXXXXXXXXS 812
            NPLTR+QI LP  R    L N L +   +    R    F+ K                  
Sbjct: 1027 NPLTRVQILLPSLRACPNL-NTLID--SSTQGSRSKDIFIYKAVL-------SSAPSSPD 1076

Query: 811  IVIMAIFGSHRELAFTTLGDDTWTSIPNGTGGGVYGNDDVLFFNGEFYTIHQHGSLRICD 632
              +M I+  +  LAFT  G  TWT + + +G      DD+++FNG F  ++    + ICD
Sbjct: 1077 CAVMIIYSDYGRLAFTKPGHQTWTLLESESG----PVDDIIYFNGSFLAVNLSWEVWICD 1132

Query: 631  INHIPPKVTDIASPSDRVQPTDRF-----YLMEMSGELYMVARTFSADDDAPDEEFYYYT 467
            I+    K    A+ +  +Q  D       YL+E  GE+YMV R     D A  +  Y  T
Sbjct: 1133 ISGSQLKTIRFAA-APALQDVDEIEYEAKYLVESGGEIYMVTRNLY--DTARRDIPYMRT 1189

Query: 466  HHLEVFKFDFHTKSWFLVDDLGDNALFVGNNASFAISTTIYTRFKGNCIYFTDDHC--IL 293
                V K D   K W  V++L   + F+GNN SF+   + Y  F+ N IYFTDD+C  + 
Sbjct: 1190 WTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLN 1249

Query: 292  YQRLFCDMGVFDYETEDAEPFEFGHDVHSSFSRPLFFMP 176
              R F DMG+++++    E +  GHD  S FS PL+  P
Sbjct: 1250 IPRNF-DMGIYNFQNTQIEHYPVGHDALSMFSAPLWIRP 1287


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  181 bits (458), Expect = 6e-43
 Identities = 132/409 (32%), Positives = 203/409 (49%), Gaps = 22/409 (5%)
 Frame = -1

Query: 1330 NWSELPEEIVDLFVKRLTCVEDFVQFGAVCKPWRSAALGKNPQ---PFAPWLMLPTDDND 1160
            +WS+LP E++++  K LT   D++   AVC  WR + + K P    P  PWLMLP   + 
Sbjct: 4    DWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFS-IPKTPNHLPPQLPWLMLPQSQSQ 62

Query: 1159 NNDEGIRSFYSISPAEEENKEKLIQFPLPQTHRRRCWGSPYGWLITLGFDFNIHLLNPLT 980
            +N +  R+F+S+S     NK   +  P     +R C GS +GWL+ L     I L+NPLT
Sbjct: 63   SN-QSRRAFFSLST----NKFHFLNLPEVSYRKRHC-GSSHGWLMILDDTPTILLINPLT 116

Query: 979  RIQISLPPQRTLQQLFNHLSEPFDAADPER------ILGAFLT------KFAFXXXXXXX 836
            R ++SLPP  +   + +     F+ +D  R      +LG  +T      + +F       
Sbjct: 117  RAKLSLPPLSSFPNVIS-----FNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLS 171

Query: 835  XXXXXXXSIVIMAIFGSHRELAFTTLGDDTWTSIPNGTGGGVYGNDDVLFFNGEFYTIHQ 656
                   + V++AI     +LA+   GD +W+ + N         +DV+F NG FY +++
Sbjct: 172  SSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFC----EDVIFVNGMFYAVNK 227

Query: 655  HGSLRICDINHIPPKVTDIASPSDRVQPTDRFYLMEMSGELYMVARTFSADD--DAPDEE 482
             G + ICDI+   P+V+ + +P  R    D  YL+    EL +V R    +   D PD E
Sbjct: 228  AGQIVICDISSDSPRVSFMETP--RQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDME 285

Query: 481  --FYYYTHHLEVFKFDFHTKSWFLVDDLGDNALFVGNNASFAISTTIYTRFKGNCIYFTD 308
                Y T   EVF+ D++   W  +  LGD ALF+G N+S ++S T ++   GNCIY+TD
Sbjct: 286  PHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTD 345

Query: 307  DHC-ILYQRLF--CDMGVFDYETEDAEPFEFGHDVHSSFSRPLFFMPCL 170
            D+    Y   F   D+G+F    E  EP         +F+ PL + P L
Sbjct: 346  DYLDANYDGHFGDHDLGIFKLCDETIEPLPC---YPRNFTSPLQWSPPL 391


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  171 bits (434), Expect = 4e-40
 Identities = 126/393 (32%), Positives = 183/393 (46%), Gaps = 20/393 (5%)
 Frame = -1

Query: 1336 MGNWSELPEEIVDLFVKRLTCVEDFVQFGAVCKPWRSAALGKNPQPFA---PWLMLPTDD 1166
            M +WS+L  E++D   K+     D+V+F AVC  WR A++ K P       PWLMLP   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWR-ASVPKTPHHLPTQLPWLMLPQSQ 59

Query: 1165 NDNNDEGIRSFYSISPAEEENKEKLIQFPLPQTHRRRCWGSPYGWLITLGFDFNIHLLNP 986
              +     R F+S+S     NK   +Q P   +HRRR  GS +GWL+ L     I LLNP
Sbjct: 60   PHHTH---RPFFSLSL----NKFHFLQLP-EASHRRRRRGSSHGWLLILDEAPEIFLLNP 111

Query: 985  LTRIQISLPPQRTLQQLFNHLSEPFDAADPER----------ILGAFLTKF--AFXXXXX 842
            LTR ++ LPP  T   +       F+ AD  R          +    L K   +F     
Sbjct: 112  LTRSKVHLPPLSTFPNVVR-----FNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTI 166

Query: 841  XXXXXXXXXSIVIMAIFGSHRELAFTTLGDDTWTSIPNGTGGGVYGNDDVLFFNGEFYTI 662
                       + + I     +LA     DD+WT + +         +DV+F  G FY +
Sbjct: 167  LSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYA----EDVIFHRGLFYAV 222

Query: 661  HQHGSLRICDINHIPPKVTDIASPSDRVQPTDRFYLMEMSGELYMVARTFSADDDA-PDE 485
            +++GS+ +CD++   P+V+ I  P       D  YL+E   EL +V R      D  PD+
Sbjct: 223  NKYGSIAVCDVSGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEPDQ 280

Query: 484  -EFYYYTHHLEVFKFDFHTKSWFLVDDLGDNALFVGNNASFAISTTIYTRFKGNCIYFTD 308
                Y T   +V + D     W +V  LGD ALF+G N S ++S+  +   KGNCIY+TD
Sbjct: 281  TSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTD 340

Query: 307  DHC-ILYQRL--FCDMGVFDYETEDAEPFEFGH 218
            D+    Y  +    D+G+F+ E    EP    H
Sbjct: 341  DYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSH 373


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  170 bits (431), Expect = 8e-40
 Identities = 124/393 (31%), Positives = 183/393 (46%), Gaps = 20/393 (5%)
 Frame = -1

Query: 1336 MGNWSELPEEIVDLFVKRLTCVEDFVQFGAVCKPWRSAALGKNPQPFA---PWLMLPTDD 1166
            M +WS+L  E++D   K+     D+V+F AVC  WR A++ K P       PWLMLP   
Sbjct: 1    MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWR-ASVPKTPHHLPTQLPWLMLPQSQ 59

Query: 1165 NDNNDEGIRSFYSISPAEEENKEKLIQFPLPQTHRRRCWGSPYGWLITLGFDFNIHLLNP 986
              +     R F+S+S     NK   +Q P   +HRRR  GS +GWL+ L     I LLNP
Sbjct: 60   PHHTH---RPFFSLSL----NKFHFLQLP-EASHRRRRRGSSHGWLLILDEAPEIFLLNP 111

Query: 985  LTRIQISLPPQRTLQQLFNHLSEPFDAADPER----------ILGAFLTKF--AFXXXXX 842
            LTR ++ LPP  T   +       F+ AD  R          +    L K   +F     
Sbjct: 112  LTRSKVHLPPLSTFPNVVR-----FNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTI 166

Query: 841  XXXXXXXXXSIVIMAIFGSHRELAFTTLGDDTWTSIPNGTGGGVYGNDDVLFFNGEFYTI 662
                       + + I     +LA     DD+WT + +        ++DV+F  G FY +
Sbjct: 167  LSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSY----SEDVIFHRGLFYAV 222

Query: 661  HQHGSLRICDINHIPPKVTDIASPSDRVQPTDRFYLMEMSGELYMVARTFSADDDAPDEE 482
            +++GS+ +CD++   P+V+ I  P       D  YL+E   EL +V R      D   ++
Sbjct: 223  NKYGSIAVCDVSGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEXDQ 280

Query: 481  --FYYYTHHLEVFKFDFHTKSWFLVDDLGDNALFVGNNASFAISTTIYTRFKGNCIYFTD 308
                Y T   +V + D     W +V  LGD ALF+G N S ++S+  +   KGNCIY+TD
Sbjct: 281  TSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTD 340

Query: 307  DHC-ILYQRL--FCDMGVFDYETEDAEPFEFGH 218
            D+    Y  +    D+G+F+ E    EP    H
Sbjct: 341  DYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSH 373


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  168 bits (425), Expect = 4e-39
 Identities = 124/421 (29%), Positives = 192/421 (45%), Gaps = 34/421 (8%)
 Frame = -1

Query: 1336 MGNWSELPEEIVDLFVKRLTCVEDFVQFGAVCKPWRSAALGKNPQPFA---PWLMLPTDD 1166
            M NWSELP+E++    ++ +   D++   AVCK W SA + K P       PWL+LP   
Sbjct: 1    MSNWSELPQELLQTITQKQSNYVDYISTRAVCKSWWSA-IPKKPHDLLCQLPWLLLPYHK 59

Query: 1165 NDNNDEGIRSFYSISPAEEENKEKLIQFPLPQTHRRRCWGSPYGWLITLGFDFNIHLLNP 986
            N+ N  G   FY+++  +  + E      LP+T  +RC GS +GWL+ +    +I LLNP
Sbjct: 60   NNPNHRG---FYNLADGKTYHLE------LPETIEKRCCGSSHGWLVMVEDTPSIFLLNP 110

Query: 985  LTRIQISLP--------PQRTLQQLFNHLSEPFDAADPERILGAFLTKFAFXXXXXXXXX 830
            LT+ +I LP        P   + +   +++E F+     RI   ++ K            
Sbjct: 111  LTKARIELPSLSTFPYFPTEVVYENSRNINEYFNTKAKLRIRETYIRK-------AIVSE 163

Query: 829  XXXXXSIVIMAIF---GSHRELAFTTLGDDTWTSIPNGTGGGVYGNDDVLFFNGEFYTIH 659
                 +  +MAI+    S   +AF   GD TW +I   +    Y   DV+F  G+FY + 
Sbjct: 164  DPSTGNFAVMAIYKTINSTENIAFCKSGDATWFTIQETSQKIHY--QDVMFHRGKFYAVD 221

Query: 658  QHGSLRICDINHIPPKVTDIASPSDRVQPT---DRFYLMEMSGELYMVARTFSADDDAPD 488
              G + IC  +  PP V  +A P   V P     ++YL  +  +L +  R          
Sbjct: 222  DKGRVSICITDINPPSVIQVADPPP-VPPLMGYKQWYLASLDEDLILAGRFRKYRGSG-- 278

Query: 487  EEFYYYTHHLEVFKFDFHTKSWFLVDDLGDNALFVGNNASFAISTTIYTRFKGNCIYFTD 308
              + Y TH   V+K D  + +W  +D LGD   F+G N   +IST  Y  + GNCIYFTD
Sbjct: 279  --YEYQTHKFMVYKLDASSSNWLELDGLGDMLSFLGWNCFHSISTQNYRNYSGNCIYFTD 336

Query: 307  DHCIL---YQRLFCDMGVFDYETEDAE--------------PFEFGHDVHSSFSRPLFFM 179
            D  I+   +     D G+F+ + +  +              PF +G++      R  F +
Sbjct: 337  DKFIVGSDFPWEGHDYGIFNLDDKSVQRLGLPSYPIKLPILPFIYGYERSLKRDRSSFIL 396

Query: 178  P 176
            P
Sbjct: 397  P 397