BLASTX nr result

ID: Cimicifuga21_contig00016143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016143
         (1819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259...   227   7e-57
ref|XP_002510535.1| conserved hypothetical protein [Ricinus comm...   203   1e-49
ref|XP_004136491.1| PREDICTED: uncharacterized protein LOC101222...   199   3e-48
ref|XP_002306928.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-45
gb|ABK94224.1| unknown [Populus trichocarpa]                          185   4e-44

>ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259217 [Vitis vinifera]
            gi|302142661|emb|CBI19864.3| unnamed protein product
            [Vitis vinifera]
          Length = 379

 Score =  227 bits (579), Expect = 7e-57
 Identities = 146/375 (38%), Positives = 206/375 (54%), Gaps = 46/375 (12%)
 Frame = -2

Query: 1779 MGAEETSKGSSERSQWKKIFNTLVQMLHTQQQQLETLVKERELFQDQFNIQHDRWVSDVQ 1600
            M  ++ S  SS+R +W+KIFN LV ML TQQ Q+E+L KER+L +D+   Q+DRW+SDV 
Sbjct: 1    MAIDKDSHVSSDRQKWQKIFNALVHMLQTQQTQVESLAKERKLLEDRIKFQYDRWISDVH 60

Query: 1599 TLEDQIFQMKKKVSVAERVRFLETSKSELFLSLKQSESLLYQKKLEFAESDLGDFRLCFA 1420
            +L+DQI QM+ K +V E+ R +E +KS+L + LK+ E  L + KLE  + +L DF++   
Sbjct: 61   SLQDQIAQMEMKFTVQEKERLVEAAKSDLLMGLKKREVSLCKLKLESTDDELVDFKVLID 120

Query: 1419 DLAQKLSEQNLC--LGDKD------------------EKCDKGVE-------------EP 1339
             L+ +  + N    +GDK+                  E+C K +E               
Sbjct: 121  FLSHECLDPNGISKVGDKEKGSRGDNNLKSVKTTKEEEQCAKRLEGEVRKLKWEYENLAS 180

Query: 1338 DSRSEVSALLLERDFVWNQFSIMESDYTSFRKSKQIEVEQANEKIDKLLTNMEQLQSSNN 1159
             + +EVSALL E++FVWNQ+ IMES+Y++   SK +EVEQANEKID LL  MEQL+S NN
Sbjct: 181  RNSAEVSALLAEQNFVWNQYKIMESNYSNKLNSKHVEVEQANEKIDNLLVGMEQLESLNN 240

Query: 1158 EKDETIXXXXXXXXXLEADS---NTKILRLSKEVEVLRNLRGPHLTPKAR--TTRARTVS 994
            EKD+ I         +E ++   N +I RLSKEVE+LR  R   +TP     T + +T  
Sbjct: 241  EKDDKIVKLKTDLAKMETETKKKNEEISRLSKEVELLRKSRSASVTPILNRCTEKQKTSG 300

Query: 993  VDRQKISRDRRIVVRKEXXXXXXXXXXXXXXXXXXXXXXXE--------IQTILNSDTPR 838
              + K    R I ++KE                       +        I     S+TPR
Sbjct: 301  QGKNKSWIGRNISIKKETPASEKNTEKKKESSVSEKNTEKKSRGSKRKEINVTPTSETPR 360

Query: 837  LFSSRFKVPKLKNSS 793
            LF+S FK+PKLKNSS
Sbjct: 361  LFTSTFKIPKLKNSS 375


>ref|XP_002510535.1| conserved hypothetical protein [Ricinus communis]
            gi|223551236|gb|EEF52722.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 354

 Score =  203 bits (516), Expect = 1e-49
 Identities = 133/353 (37%), Positives = 189/353 (53%), Gaps = 32/353 (9%)
 Frame = -2

Query: 1755 GSSERSQWKKIFNTLVQMLHTQQQQLETLVKERELFQDQFNIQHDRWVSDVQTLEDQIFQ 1576
            G+ + SQ   +FN LVQ+L  QQ+QL+TL++ER+  +D+   QH+RW SDV+  ED I Q
Sbjct: 2    GAGKSSQVDNLFNNLVQILKNQQEQLKTLLEERKFLEDRIKSQHERWASDVRLCEDHISQ 61

Query: 1575 MKKKVSVAERVRFLETSKSELFLSLKQSESLLYQKKLEFAESDLGDFRLCFADLAQKLSE 1396
            M   +   +    L+ +KS L L LK  E+ LY+ KLE  E +L DFR CF  L+Q L E
Sbjct: 62   MNDALMEKDLNCLLQAAKSNLMLGLKHREASLYKLKLEQTEDELADFRSCFNYLSQILEE 121

Query: 1395 QNLCLGDKDEKCDKGVEEPDSR--------------------------SEVSALLLERDF 1294
                   + +KC +GVE+ + R                          SE+SALL E+ F
Sbjct: 122  N----PKESDKCKEGVEDSNLRSSGSKRLDNEVKRLKSEYEKLSSEKNSEISALLKEKSF 177

Query: 1293 VWNQFSIMESDYTSFRKSKQIEVEQANEKIDKLLTNMEQLQSSNNEKDETIXXXXXXXXX 1114
            VWNQ++++ES  +   K+KQ EV+QAN KI K+L ++E LQSSNNEKDE           
Sbjct: 178  VWNQYNVLESSLSDKLKTKQSEVDQANAKIAKVLASVELLQSSNNEKDEIFSKLKAKLTE 237

Query: 1113 LEADSN---TKILRLSKEVEVLRNLRGPHLTPKAR--TTRARTVSVDRQKISRDR-RIVV 952
            +E D +    +  RL +E+E+L+  R   +TP  +   T A+  S   +   R R  +VV
Sbjct: 238  MEVDRDKWKEENSRLLQELELLKKSRSAQVTPSLKHCNTGAKASSRVVKSNGRSRSNVVV 297

Query: 951  RKEXXXXXXXXXXXXXXXXXXXXXXXEIQTILNSDTPRLFSSRFKVPKLKNSS 793
            +KE                       E++TI   +TP+LFS+ FKVPKLK SS
Sbjct: 298  KKELCPAKAAPPLKDADKGSRGSKRKEVETITILETPKLFSASFKVPKLKISS 350


>ref|XP_004136491.1| PREDICTED: uncharacterized protein LOC101222062 [Cucumis sativus]
            gi|449505782|ref|XP_004162567.1| PREDICTED:
            uncharacterized LOC101222062 [Cucumis sativus]
          Length = 365

 Score =  199 bits (505), Expect = 3e-48
 Identities = 132/369 (35%), Positives = 191/369 (51%), Gaps = 42/369 (11%)
 Frame = -2

Query: 1779 MGAEETSKGSSERSQWKKIFNTLVQMLHTQQQQLETLVKERELFQDQFNIQHDRWVSDVQ 1600
            MG  + SK S ER  W KIFN L QML TQQ QLETLV ER+L +D+  +QH+RWV+D++
Sbjct: 1    MGKSDRSKPSIERRNWGKIFNGLTQMLRTQQNQLETLVTERKLLEDRVKMQHERWVADIR 60

Query: 1599 TLEDQIFQMKKKVSVAERVRFLETSKSELFLSLKQSESLLYQKKLEFAESDLGDFRLCFA 1420
              ED + QM+ ++ + +  R  + SKS+L   +KQ+E  + + K+E +E++L DF+  F 
Sbjct: 61   LYEDHVSQMRDELFLQDMERSFQASKSDLLAGMKQTELYVCRLKIEHSEAELEDFKSFFD 120

Query: 1419 DLA----QKLSEQNLCLGDKDEKCDKGVE------------------------------- 1345
            D       KL E  L    +  + + G E                               
Sbjct: 121  DFIAHKNSKLQESFLRSASEPAEANGGGEGGMSKFGNTDEVRRSEALESEVRRFRSEYEK 180

Query: 1344 -EPDSRSEVSALLLERDFVWNQFSIMESDYTSFRKSKQIEVEQANEKIDKLLTNMEQLQS 1168
               +  SEVSAL+ E  FVWNQ++++E+DY+S  K+K  E+E+A+ K+++LL  +EQLQS
Sbjct: 181  LASEKSSEVSALVTENKFVWNQYNVIEADYSSKLKNKHSELERAHLKVEELLATLEQLQS 240

Query: 1167 SNNEKDETIXXXXXXXXXLEADS---NTKILRLSKEVEVLRNLRGPHLTPKARTTRA--R 1003
            SNNEKD+ I         +E DS     +I RLS ++EV R       TP  +  +A  R
Sbjct: 241  SNNEKDDVIAMLRNQVGKMETDSFKLKDEISRLSHDLEVQRKSVNATATPVLKPCKAGLR 300

Query: 1002 TVSVDRQKISRDR-RIVVRKEXXXXXXXXXXXXXXXXXXXXXXXEIQTILNSDTPRLFSS 826
            T  +  +  SR R  ++V K+                           I +  TPRLF+S
Sbjct: 301  TSGLGGKNGSRSRSNVIVNKDAYSAQPSHSGNQMKRGAG--------DISDPGTPRLFTS 352

Query: 825  RFKVPKLKN 799
             FKVPKLKN
Sbjct: 353  SFKVPKLKN 361


>ref|XP_002306928.1| predicted protein [Populus trichocarpa] gi|222856377|gb|EEE93924.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  187 bits (475), Expect = 8e-45
 Identities = 129/346 (37%), Positives = 190/346 (54%), Gaps = 29/346 (8%)
 Frame = -2

Query: 1752 SSERSQWKKIFNTLVQMLHTQQQQLETLVKERELFQDQFNIQHDRWVSDVQTLEDQIFQM 1573
            +S+R +W K+F  LV++L +QQ+QLETL+KER   +D+   QH+RWVSD++  ED I Q+
Sbjct: 11   TSDREKWDKVFGGLVKLLKSQQEQLETLLKERHFLEDRIKTQHERWVSDIRLYEDHISQI 70

Query: 1572 KKKVSVAERVRFLETSKSELFLSLKQSESLLYQKKLEFAESDLGDFRLCFADLAQKL--- 1402
               +   +    LE +KS+L L LKQ E+ L++ +LE  E +L DF+  F+ L+Q L   
Sbjct: 71   NGDLVEKDMACVLEAAKSDLMLGLKQREASLHKSRLEETEDELADFQAWFSYLSQNLKAN 130

Query: 1401 SEQNL---CLGDKD------EKCDKGVEE---------PDSRSEVSALLLERDFVWNQFS 1276
            SE+       G  D      +K +  VE           +  SEVSALL E+ FVWNQ++
Sbjct: 131  SEETANGKGGGSSDMKSGGAKKLEAKVERLKLENEKLVSEKNSEVSALLKEKTFVWNQYN 190

Query: 1275 IMESDYTSFRKSKQIEVEQANEKIDKLLTNMEQLQSSNNEKDETIXXXXXXXXXLEADSN 1096
            I+ES+ TS  +SK+ EVE+ANEKI ++L   E LQSSN+EKDE I         +EAD+ 
Sbjct: 191  ILESNLTSKLRSKEAEVEKANEKIAEVLATAELLQSSNDEKDEIIRRLNMKVAKMEADAE 250

Query: 1095 T---KILRLSKEVEVLRNLRGPHLT----PKARTTRARTVSVDRQKISRD-RRIVVRKEX 940
                +I +LS+E+E +R  R   +T    P +  TR+  + V  +   R+   +V RK  
Sbjct: 251  KWKGEISKLSQELEFIRKSRSAQVTSIMKPCSAPTRSSNLGV--KSCGRNFSNLVDRKVS 308

Query: 939  XXXXXXXXXXXXXXXXXXXXXXEIQTILNSDTPRLFSSRFKVPKLK 802
                                   I  +   +TP+LFSS F+VPK+K
Sbjct: 309  APILATVPSKGSDKGSRSLKKKRIDIL---ETPKLFSSTFEVPKVK 351


>gb|ABK94224.1| unknown [Populus trichocarpa]
          Length = 357

 Score =  185 bits (469), Expect = 4e-44
 Identities = 129/346 (37%), Positives = 188/346 (54%), Gaps = 29/346 (8%)
 Frame = -2

Query: 1752 SSERSQWKKIFNTLVQMLHTQQQQLETLVKERELFQDQFNIQHDRWVSDVQTLEDQIFQM 1573
            +S+R +W K+F  LV+ L +QQ+QLETL+KER   +D+   QH+RWVSD++  ED I Q+
Sbjct: 11   TSDREKWDKVFGGLVKSLKSQQEQLETLLKERHFLEDRIKTQHERWVSDIRLYEDHISQI 70

Query: 1572 KKKVSVAERVRFLETSKSELFLSLKQSESLLYQKKLEFAESDLGDFRLCFADLAQKL--- 1402
                   +    LE +KS+L L LKQ E+ L++ +LE  E +L DF+  F+ L+Q L   
Sbjct: 71   NGDSVEKDMACVLEAAKSDLMLGLKQREASLHKSRLEETEDELADFQAWFSYLSQNLKAN 130

Query: 1401 SEQNL---CLGDKD------EKCDKGVEE---------PDSRSEVSALLLERDFVWNQFS 1276
            SE+       G  D      +K +  VE           +  SEVSALL E+ FVWNQ++
Sbjct: 131  SEETANGKGGGSSDMKSGGAKKLEAKVERLKLENEKLVSEKNSEVSALLKEKTFVWNQYN 190

Query: 1275 IMESDYTSFRKSKQIEVEQANEKIDKLLTNMEQLQSSNNEKDETIXXXXXXXXXLEADSN 1096
            I+ES+ TS  +SK+ EVE+ANEKI ++L   E LQSSN+EKDE I         +EAD+ 
Sbjct: 191  ILESNLTSKLRSKEAEVEKANEKIAEVLATAELLQSSNDEKDEIIRRLNMKVAKMEADAE 250

Query: 1095 T---KILRLSKEVEVLRNLRGPHLT----PKARTTRARTVSVDRQKISRD-RRIVVRKEX 940
                +I +LS+E+E +R  R   +T    P +  TR+  + V  +   R+   +V RK  
Sbjct: 251  KWKGEISKLSQELEFIRKSRSAQVTSIMKPCSAPTRSSNLGV--KSCGRNFSNLVDRKVS 308

Query: 939  XXXXXXXXXXXXXXXXXXXXXXEIQTILNSDTPRLFSSRFKVPKLK 802
                                   I  +   +TP+LFSS F+VPK+K
Sbjct: 309  APILATVPSKGSDKGSRSLKKKRIDIL---ETPKLFSSTFEVPKVK 351


Top