BLASTX nr result

ID: Cimicifuga21_contig00016142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016142
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group] g...   145   3e-33
gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indi...   145   3e-33
gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hy...   140   1e-31
ref|NP_001143743.1| uncharacterized protein LOC100276497 [Zea ma...   140   1e-31
ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloro...   140   1e-31

>ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group]
           gi|53793078|dbj|BAD54288.1| putative arogenate
           dehydrogenase isoform 2 [Oryza sativa Japonica Group]
           gi|113595847|dbj|BAF19721.1| Os06g0542200 [Oryza sativa
           Japonica Group] gi|215765048|dbj|BAG86745.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222635711|gb|EEE65843.1| hypothetical protein
           OsJ_21611 [Oryza sativa Japonica Group]
          Length = 342

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/95 (69%), Positives = 78/95 (82%)
 Frame = +1

Query: 4   VVRGIPFHKLKPNTIIADVLSVKQFPKNLLLDVVPSNFGILCTHPMFGKFSGKNSWEGLR 183
           VVR IPF KL+P T++ADVLSVKQFP+NLLL+++P  FGI+CTHPMFG  SGK+ W GL 
Sbjct: 145 VVRAIPFRKLRPGTLVADVLSVKQFPRNLLLEILPPGFGIVCTHPMFGPESGKHGWSGLP 204

Query: 184 FVYDKVRIAENSIQEQKCEQFLDIFQDEGCRMVEM 288
           FVYDKVR+A+   Q  KCEQFL IF+ EGCRMVEM
Sbjct: 205 FVYDKVRVAKEGDQAAKCEQFLSIFEREGCRMVEM 239


>gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indica Group]
          Length = 342

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/95 (69%), Positives = 78/95 (82%)
 Frame = +1

Query: 4   VVRGIPFHKLKPNTIIADVLSVKQFPKNLLLDVVPSNFGILCTHPMFGKFSGKNSWEGLR 183
           VVR IPF KL+P T++ADVLSVKQFP+NLLL+++P  FGI+CTHPMFG  SGK+ W GL 
Sbjct: 145 VVRAIPFRKLRPGTLVADVLSVKQFPRNLLLEILPPGFGIVCTHPMFGPESGKHGWSGLP 204

Query: 184 FVYDKVRIAENSIQEQKCEQFLDIFQDEGCRMVEM 288
           FVYDKVR+A+   Q  KCEQFL IF+ EGCRMVEM
Sbjct: 205 FVYDKVRVAKEGDQAAKCEQFLSIFEREGCRMVEM 239


>gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hypothetical protein
           ZEAMMB73_026457 [Zea mays]
          Length = 392

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/95 (66%), Positives = 79/95 (83%)
 Frame = +1

Query: 4   VVRGIPFHKLKPNTIIADVLSVKQFPKNLLLDVVPSNFGILCTHPMFGKFSGKNSWEGLR 183
           VVR IPFHKL+P+TI+ADVLSVK+FP+NLLL+V+P  FGI+CTHPMFG  SGK+ W  L 
Sbjct: 157 VVRAIPFHKLRPDTIVADVLSVKEFPRNLLLEVLPPGFGIICTHPMFGPESGKHGWGKLP 216

Query: 184 FVYDKVRIAENSIQEQKCEQFLDIFQDEGCRMVEM 288
           FV+DKVR+A++  Q   C++FL IF+ EGCRMVEM
Sbjct: 217 FVFDKVRVADDGDQAATCDRFLSIFEQEGCRMVEM 251


>ref|NP_001143743.1| uncharacterized protein LOC100276497 [Zea mays]
           gi|195626078|gb|ACG34869.1| hypothetical protein [Zea
           mays]
          Length = 302

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/95 (66%), Positives = 79/95 (83%)
 Frame = +1

Query: 4   VVRGIPFHKLKPNTIIADVLSVKQFPKNLLLDVVPSNFGILCTHPMFGKFSGKNSWEGLR 183
           VVR IPFHKL+P+TI+ADVLSVK+FP+NLLL+V+P  FGI+CTHPMFG  SGK+ W  L 
Sbjct: 157 VVRAIPFHKLRPDTIVADVLSVKEFPRNLLLEVLPPGFGIICTHPMFGPESGKHGWGKLP 216

Query: 184 FVYDKVRIAENSIQEQKCEQFLDIFQDEGCRMVEM 288
           FV+DKVR+A++  Q   C++FL IF+ EGCRMVEM
Sbjct: 217 FVFDKVRVADDGDQAATCDRFLSIFEQEGCRMVEM 251


>ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 361

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/95 (67%), Positives = 77/95 (81%)
 Frame = +1

Query: 4   VVRGIPFHKLKPNTIIADVLSVKQFPKNLLLDVVPSNFGILCTHPMFGKFSGKNSWEGLR 183
           VVR IPFHKL+ +TI+ADVLSVKQFP+NLLL+++P  FGI+CTHPMFG  SGK+ W  L 
Sbjct: 165 VVRAIPFHKLRSDTIVADVLSVKQFPRNLLLEILPPEFGIVCTHPMFGPESGKHGWSTLP 224

Query: 184 FVYDKVRIAENSIQEQKCEQFLDIFQDEGCRMVEM 288
           FVYDKVR+A+   Q+  C QFL IF+ EGCRMVEM
Sbjct: 225 FVYDKVRLADKGDQKANCGQFLSIFEGEGCRMVEM 259


Top