BLASTX nr result

ID: Cimicifuga21_contig00016140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016140
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310652.1| predicted protein [Populus trichocarpa] gi|2...   186   5e-45
ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|2...   180   2e-43
ref|XP_002267776.1| PREDICTED: uncharacterized protein LOC100266...   180   3e-43
gb|ABK95705.1| unknown [Populus trichocarpa]                          178   9e-43
ref|XP_002317729.1| predicted protein [Populus trichocarpa] gi|2...   178   1e-42

>ref|XP_002310652.1| predicted protein [Populus trichocarpa] gi|222853555|gb|EEE91102.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score =  186 bits (472), Expect = 5e-45
 Identities = 107/199 (53%), Positives = 134/199 (67%), Gaps = 5/199 (2%)
 Frame = -1

Query: 588 SSSTCPGGEGDNYIEHIVSKMDTLAGVAIKYGVEVADIKRMNALVTDLQMFALKSLRIPL 409
           SS++     G  +IEH VSK+DTLAGVAIKYGVEVADIK+MN LVTDLQMFALKSL+IPL
Sbjct: 79  SSASTSSNVGSGFIEHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDLQMFALKSLQIPL 138

Query: 408 PGRHPPSLRLANGFSTPGTRNLEWTSLR--ESCSVASFQSLGSKSSQKRVSPAMSSLQGF 235
           PGRHPPSL L+NGF TP  R+ E T  R  +S    SFQ L  KSSQ +VSPAMSSLQG+
Sbjct: 139 PGRHPPSLFLSNGFDTP--RSYEQTPPRGLQSDVFDSFQYLNPKSSQLKVSPAMSSLQGY 196

Query: 234 YGLKTSSRKSATEGTELAVYATDKSHYLDNEILPKPSPVFDXXXXXXXXXXSLMNDFLHE 55
           YGLK   +K+ ++G E+AV     SH+L+  +  KPSP             S +N+ L E
Sbjct: 197 YGLKPKDQKNTSKGFEMAVNRNGYSHHLEGGLYLKPSPASHPPLCLHRKTRSWVNELLDE 256

Query: 54  NGELIE---VEEVRDSEVE 7
           N EL+    +++ ++ E E
Sbjct: 257 NNELVNKLFLDDAKEIESE 275


>ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|222856619|gb|EEE94166.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  180 bits (457), Expect = 2e-43
 Identities = 106/200 (53%), Positives = 129/200 (64%), Gaps = 5/200 (2%)
 Frame = -1

Query: 591 MSSSTCPGGEGDNYIEHIVSKMDTLAGVAIKYGVEVADIKRMNALVTDLQMFALKSLRIP 412
           M S++     G  +IEH VSK+DTLAGVAIKYGVEVADIK+MN+LVTDLQMFALKSL+IP
Sbjct: 1   MLSASTSSNSGVGFIEHPVSKLDTLAGVAIKYGVEVADIKKMNSLVTDLQMFALKSLQIP 60

Query: 411 LPGRHPPSLRLANGFSTPGTRNLEWTSLR--ESCSVASFQSLGSKSSQKRVSPAMSSLQG 238
           LPGRH PS  L+NG   PG  + E T  R  +S    SFQSL  KSS+ +VSPAMSSLQG
Sbjct: 61  LPGRHQPSSFLSNGSDVPGYNSYERTPPRGLQSDLFDSFQSLKPKSSRCKVSPAMSSLQG 120

Query: 237 FYGLKTSSRKSATEGTELAVYATDKSHYLDNEILPKPSPVFDXXXXXXXXXXSLMNDFLH 58
           +YGLK   +K   EG E+AVY    SH+ +     KPSP             SL N FL 
Sbjct: 121 YYGLKPKDQKKIPEGFEMAVYRNGHSHHPEGGPYLKPSPASHPPLSLHRKTKSLANGFLD 180

Query: 57  ENGELIE---VEEVRDSEVE 7
           E   L++   ++EV++ E E
Sbjct: 181 EKNGLVDKLYLDEVKEGESE 200


>ref|XP_002267776.1| PREDICTED: uncharacterized protein LOC100266699 [Vitis vinifera]
          Length = 366

 Score =  180 bits (456), Expect = 3e-43
 Identities = 104/194 (53%), Positives = 125/194 (64%), Gaps = 7/194 (3%)
 Frame = -1

Query: 561 GDNYIEHIVSKMDTLAGVAIKYGVEVADIKRMNALVTDLQMFALKSLRIPLPGRHPPSLR 382
           G NYI H VSKMDTLAGVAIKYGVEVADIKRMN L TDLQMFALKSL+IPLPGRHPPS  
Sbjct: 33  GVNYILHTVSKMDTLAGVAIKYGVEVADIKRMNGLATDLQMFALKSLQIPLPGRHPPSPV 92

Query: 381 LANGFSTPGTRNLEWTSLRESCS--VASFQSLGSKSSQKRVSPAMSSLQGFYGLKT--SS 214
           L+N  ++ G R+ E T L  S S  + S QSLG K+ QK+VSPAMS+LQ +YGLK+   +
Sbjct: 93  LSNASTSSGERSTEETPLHLSHSNVLESLQSLGLKTPQKKVSPAMSTLQNYYGLKSQDKN 152

Query: 213 RKSATEGTELAVYATDKSHYLDNEILPKPSPVFDXXXXXXXXXXSLMNDFLHENGEL--- 43
           +    EG E+ VY   K H  D  +LPK  P+ +          +L N F  ENG +   
Sbjct: 153 QNGGAEGMEMTVYGAGKPHGFDFGLLPKALPISEPSSNQDHKSRNLANGFFAENGTVAAD 212

Query: 42  IEVEEVRDSEVENS 1
           + + E  D E E S
Sbjct: 213 VPISEAGDGEGERS 226


>gb|ABK95705.1| unknown [Populus trichocarpa]
          Length = 359

 Score =  178 bits (452), Expect = 9e-43
 Identities = 105/202 (51%), Positives = 131/202 (64%), Gaps = 12/202 (5%)
 Frame = -1

Query: 570 GGEGD-------NYIEHIVSKMDTLAGVAIKYGVEVADIKRMNALVTDLQMFALKSLRIP 412
           GG GD       NYIEH VSK DTLAGVAIKYGVEVAD+KR+N L TDLQMFALK+L IP
Sbjct: 14  GGSGDSNSSTGKNYIEHQVSKRDTLAGVAIKYGVEVADVKRLNGLSTDLQMFALKTLLIP 73

Query: 411 LPGRHPPSLRLANGFSTPGTRNLEWTS--LRESCSVASFQSLGSKSSQKRVSPAMSSLQG 238
           LPGRHPPS  L+NG ++PG  +++ T    R S  + + +SL  KS Q++VSPAMS+LQ 
Sbjct: 74  LPGRHPPSPILSNGSASPGGNDVDMTPPWPRHSNVLETLESLSLKSPQQKVSPAMSTLQN 133

Query: 237 FYGLKTSSRKSATEGTELAVYATDKSHYLDNEILPKPSPVFDXXXXXXXXXXSLMNDFLH 58
           FYGLK+S RK + EG E+AVY      YL+  +L + +PV            +L +DFL 
Sbjct: 134 FYGLKSSKRKDSAEGMEMAVYRRGSLDYLNEGLLHRATPV-SGPSYSNHRSINLADDFLS 192

Query: 57  ENG---ELIEVEEVRDSEVENS 1
           ENG   E   + E R+ E E S
Sbjct: 193 ENGLAAEYNPLSEAREGEGEKS 214


>ref|XP_002317729.1| predicted protein [Populus trichocarpa] gi|222858402|gb|EEE95949.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  178 bits (451), Expect = 1e-42
 Identities = 102/192 (53%), Positives = 128/192 (66%), Gaps = 5/192 (2%)
 Frame = -1

Query: 561 GDNYIEHIVSKMDTLAGVAIKYGVEVADIKRMNALVTDLQMFALKSLRIPLPGRHPPSLR 382
           G NYIEH VSK DTLAGVAIKYGVEVAD+KR+N L TDLQMFALK+L IPLPGRHPPS  
Sbjct: 5   GKNYIEHQVSKRDTLAGVAIKYGVEVADVKRLNGLSTDLQMFALKTLLIPLPGRHPPSPI 64

Query: 381 LANGFSTPGTRNLEWTS--LRESCSVASFQSLGSKSSQKRVSPAMSSLQGFYGLKTSSRK 208
           L+NG ++PG  +++ T    R S  + + +SL  KS Q++VSPAMS+LQ FYGLK+S RK
Sbjct: 65  LSNGSASPGGNDVDMTPPWPRHSNVLETLESLSLKSPQQKVSPAMSTLQNFYGLKSSKRK 124

Query: 207 SATEGTELAVYATDKSHYLDNEILPKPSPVFDXXXXXXXXXXSLMNDFLHENG---ELIE 37
            + EG E+AVY      YL+  +L + +PV            +L +DFL ENG   E   
Sbjct: 125 DSAEGMEMAVYRRGSLDYLNEGLLHRATPV-SGPSYSNHRSINLADDFLSENGLAAEYNP 183

Query: 36  VEEVRDSEVENS 1
           + E R+ E E S
Sbjct: 184 LSEAREGEGEKS 195


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