BLASTX nr result

ID: Cimicifuga21_contig00016124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016124
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   151   3e-34
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              151   3e-34
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   149   2e-33
ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-33
ref|XP_002531983.1| RNA binding protein, putative [Ricinus commu...   144   3e-32

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  151 bits (382), Expect = 3e-34
 Identities = 71/189 (37%), Positives = 117/189 (61%), Gaps = 10/189 (5%)
 Frame = -2

Query: 772  ESFPFTKSSPMWGIIESMEAFQLMPQHPHFRPLKKANEELREGIAMGHMLTFANLVERTS 593
            +S PF KSSP+W  +E++E FQ MPQ PHFRPL+   EE REG+A+G+M+TF+ L+E+ +
Sbjct: 1025 QSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVA 1084

Query: 592  KAHLDDQRSVFENRLKVLADMEEHGFIVQPIRSRLEEMLKMKDSYSQLDGKLNTAEKELI 413
            K   DD RS+F + L+ L ++E HGF  +P++SR+ E++ +KD   QL G+    E +++
Sbjct: 1085 KLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIM 1144

Query: 412  DENRQLEEIQESIAQLNMQLQTLLKAEGL----------KLVELQRTADEIEKSIQRARL 263
            +   +  +I E I +++ ++  L +   L          ++  L  + D + +SIQ AR 
Sbjct: 1145 EHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQ 1204

Query: 262  DFDSVVAAP 236
            DF+ V  +P
Sbjct: 1205 DFERVATSP 1213


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  151 bits (382), Expect = 3e-34
 Identities = 71/189 (37%), Positives = 117/189 (61%), Gaps = 10/189 (5%)
 Frame = -2

Query: 772  ESFPFTKSSPMWGIIESMEAFQLMPQHPHFRPLKKANEELREGIAMGHMLTFANLVERTS 593
            +S PF KSSP+W  +E++E FQ MPQ PHFRPL+   EE REG+A+G+M+TF+ L+E+ +
Sbjct: 885  QSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVA 944

Query: 592  KAHLDDQRSVFENRLKVLADMEEHGFIVQPIRSRLEEMLKMKDSYSQLDGKLNTAEKELI 413
            K   DD RS+F + L+ L ++E HGF  +P++SR+ E++ +KD   QL G+    E +++
Sbjct: 945  KLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIM 1004

Query: 412  DENRQLEEIQESIAQLNMQLQTLLKAEGL----------KLVELQRTADEIEKSIQRARL 263
            +   +  +I E I +++ ++  L +   L          ++  L  + D + +SIQ AR 
Sbjct: 1005 EHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNESIQSARQ 1064

Query: 262  DFDSVVAAP 236
            DF+ V  +P
Sbjct: 1065 DFERVATSP 1073


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  149 bits (375), Expect = 2e-33
 Identities = 70/183 (38%), Positives = 115/183 (62%), Gaps = 10/183 (5%)
 Frame = -2

Query: 772  ESFPFTKSSPMWGIIESMEAFQLMPQHPHFRPLKKANEELREGIAMGHMLTFANLVERTS 593
            +S PF KSSP+W  +E++E FQ MPQ PHFRPL+   EE REG+A+G+M+TF+ L+E+ +
Sbjct: 1007 QSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVA 1066

Query: 592  KAHLDDQRSVFENRLKVLADMEEHGFIVQPIRSRLEEMLKMKDSYSQLDGKLNTAEKELI 413
            K   DD RS+F + L+ L ++E HGF  +P++SR+ E++ +KD   QL G+    E +++
Sbjct: 1067 KLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIM 1126

Query: 412  DENRQLEEIQESIAQLNMQLQTLLKAEGL----------KLVELQRTADEIEKSIQRARL 263
            +   +  +I E I +++ ++  L +   L          ++  L  +AD + +SIQ AR 
Sbjct: 1127 EHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSADAMNESIQSARQ 1186

Query: 262  DFD 254
            DF+
Sbjct: 1187 DFE 1189


>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  147 bits (370), Expect = 7e-33
 Identities = 83/207 (40%), Positives = 124/207 (59%), Gaps = 10/207 (4%)
 Frame = -2

Query: 826  ALQSSIVVATTTCSSLEKESFPFTKSSPMWGIIESMEAFQLMPQHPHFRPLKKANEELRE 647
            A+QS  V   +  + +E +  PF K SP+W  IESME FQ++PQ PHF PL +  EE RE
Sbjct: 709  AVQSCTVDPKSNDTMVENQLVPFVKKSPVWNTIESMEVFQIIPQKPHFHPLTECKEEYRE 768

Query: 646  GIAMGHMLTFANLVERTSKAHLDDQRSVFENRLKVLADMEEHGFIVQPIRSRLEEMLKMK 467
            G A+G M+TFA+L E+ S    DD RS+ E+ L+ L D+E+HGF +   R RL E+L +K
Sbjct: 769  GSAIGIMVTFASLFEKISSLQFDDCRSILESTLESLVDLEKHGFDITVPRCRLNELLSIK 828

Query: 466  DSYSQLDGKLNTAEKEL---IDENRQLEE----IQESIAQLNMQL---QTLLKAEGLKLV 317
            D   ++  +   AE+++    DE R+LEE    I++ I +L  +L   +  +  +GL + 
Sbjct: 829  DGQGEVINESKDAEEKIRVHTDEKRKLEEKMSDIEKKITELQEELALTKAKMDVKGLDIS 888

Query: 316  ELQRTADEIEKSIQRARLDFDSVVAAP 236
            ++Q  AD I + I+ AR  F  V +AP
Sbjct: 889  KMQSHADAINERIKNARDHFVKVASAP 915


>ref|XP_002531983.1| RNA binding protein, putative [Ricinus communis]
            gi|223528380|gb|EEF30419.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 591

 Score =  144 bits (364), Expect = 3e-32
 Identities = 86/236 (36%), Positives = 132/236 (55%), Gaps = 10/236 (4%)
 Frame = -2

Query: 913  VEDNEDNNHRLMSNEAESSFSLEAMCDERALQSSIVVATTTCSSLE---KESFPFTKSSP 743
            V D+ D ++R    E+ S+   E M ++ +L  S           E    +  PF KSS 
Sbjct: 356  VSDSHDKDYRQQICESASNSGTE-MREKLSLYLSGHPGNRVPRDTELVKSQEMPFHKSSF 414

Query: 742  MWGIIESMEAFQLMPQHPHFRPLKKANEELREGIAMGHMLTFANLVERTSKAHLDDQRSV 563
            +WG IESME F+L+PQ PHF PL +  E  REG+AM HM+TFA LVE+TSK  +DD R++
Sbjct: 415  VWGDIESMEVFRLLPQKPHFSPLIEFEEASREGVAMRHMMTFAMLVEKTSKLRVDDPRNL 474

Query: 562  FENRLKVLADMEEHGFIVQPIRSRLEEMLKMKDSYSQLDGKLNTAEKELIDENRQLEEIQ 383
            F++ L++LA++  HGF V+ +  RL  +L MKD Y QL G       +LI+ N ++ +++
Sbjct: 475  FQSYLEILANLRLHGFDVKAVMDRLNMLLSMKDRYEQLKGPSKNGHVQLIEHNYEMMKLE 534

Query: 382  ESIAQLNMQLQTLLKAEGLKLVELQR-------TADEIEKSIQRARLDFDSVVAAP 236
            E I + +  +    + + +K+V            A+ I   I   +L F+S+ AAP
Sbjct: 535  EGIDKTDKTISESGEKQAMKVVTKDSGNNASKVDAEVISADILSTKLQFESLAAAP 590


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