BLASTX nr result

ID: Cimicifuga21_contig00016108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016108
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|2...   209   4e-52
ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|2...   207   1e-51
gb|ABK94888.1| unknown [Populus trichocarpa]                          207   1e-51
ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis...   207   2e-51
ref|XP_002519976.1| GTP binding protein, putative [Ricinus commu...   204   1e-50

>ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  209 bits (531), Expect = 4e-52
 Identities = 105/184 (57%), Positives = 133/184 (72%), Gaps = 12/184 (6%)
 Frame = -2

Query: 517 MPKVYPNAVASPPQ----------APNPVSDRQVQVLTVWKKSLLFNCKGFTVFDAKGNL 368
           M KVYPN   +             A N +      VLTVWKKSLLFNC GFTV+D +GNL
Sbjct: 1   MTKVYPNVAPTTTNKKQQLFNLKPANNALDVDHAVVLTVWKKSLLFNCHGFTVYDGRGNL 60

Query: 367 LFRVDNYLAS--NKAEILLMDATGNPCLTIRRKKLTLADNWEVFDGESNVNPLYTVKKNI 194
           +FRVDNY+A+  N  EI+LMDA G P LTIRRK+L+L DNW V++GE+  NP + VKK++
Sbjct: 61  VFRVDNYMATSGNNGEIVLMDAAGKPLLTIRRKRLSLGDNWLVYEGETTTNPRFLVKKHV 120

Query: 193 NLLNSRLLAHVTAGCNDRSNKSVLYQIEGSYVQRCCTVYDDQRRLVSEIKQKEPVGGVSF 14
           N+LN++ LAHV+      SNK+V+Y+IEGSY QRCC VYD+++R V+EIKQKE VGGV+F
Sbjct: 121 NILNTKCLAHVSPASG--SNKNVVYEIEGSYAQRCCAVYDEKKRRVAEIKQKESVGGVAF 178

Query: 13  GVDV 2
           GVDV
Sbjct: 179 GVDV 182


>ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|222833453|gb|EEE71930.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  207 bits (527), Expect = 1e-51
 Identities = 107/189 (56%), Positives = 137/189 (72%), Gaps = 17/189 (8%)
 Frame = -2

Query: 517 MPKVYPNAVASPPQAPNPVSDRQVQ---------------VLTVWKKSLLFNCKGFTVFD 383
           M KVYPN   +P  A      RQ+                VLTVWKKSLLFNC GFTVFD
Sbjct: 1   MTKVYPNV--APTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFD 58

Query: 382 AKGNLLFRVDNYLASN--KAEILLMDATGNPCLTIRRKKLTLADNWEVFDGESNVNPLYT 209
           +KGNLLFRVDNY+A++    EI+LMDA G P LT+RRK+L+L D+W V+DGE+ +NP ++
Sbjct: 59  SKGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFS 118

Query: 208 VKKNINLLNSRLLAHVTAGCNDRSNKSVLYQIEGSYVQRCCTVYDDQRRLVSEIKQKEPV 29
           VKK++++LN + LAHV+      SNK+V+Y+IEGSY QRCC VYD+++R V+EIKQKE V
Sbjct: 119 VKKHVSILNKKCLAHVSQAAG--SNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERV 176

Query: 28  GGVSFGVDV 2
           GGV+FGVDV
Sbjct: 177 GGVAFGVDV 185


>gb|ABK94888.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  207 bits (527), Expect = 1e-51
 Identities = 107/189 (56%), Positives = 137/189 (72%), Gaps = 17/189 (8%)
 Frame = -2

Query: 517 MPKVYPNAVASPPQAPNPVSDRQVQ---------------VLTVWKKSLLFNCKGFTVFD 383
           M KVYPN   +P  A      RQ+                VLTVWKKSLLFNC GFTVFD
Sbjct: 1   MTKVYPNV--APTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFD 58

Query: 382 AKGNLLFRVDNYLASN--KAEILLMDATGNPCLTIRRKKLTLADNWEVFDGESNVNPLYT 209
           +KGNLLFRVDNY+A++    EI+LMDA G P LT+RRK+L+L D+W V+DGE+ +NP ++
Sbjct: 59  SKGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFS 118

Query: 208 VKKNINLLNSRLLAHVTAGCNDRSNKSVLYQIEGSYVQRCCTVYDDQRRLVSEIKQKEPV 29
           VKK++++LN + LAHV+      SNK+V+Y+IEGSY QRCC VYD+++R V+EIKQKE V
Sbjct: 119 VKKHVSILNKKCLAHVSQAAG--SNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERV 176

Query: 28  GGVSFGVDV 2
           GGV+FGVDV
Sbjct: 177 GGVAFGVDV 185


>ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|296089330|emb|CBI39102.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  207 bits (526), Expect = 2e-51
 Identities = 102/175 (58%), Positives = 131/175 (74%), Gaps = 3/175 (1%)
 Frame = -2

Query: 517 MPKVYPNAVASPPQAPNP---VSDRQVQVLTVWKKSLLFNCKGFTVFDAKGNLLFRVDNY 347
           M KVYPNA A+   +      +      VLTVWKKSLLFNC GFTVFD KGNL+FRVDNY
Sbjct: 1   MTKVYPNATAASSGSEGVKLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVFRVDNY 60

Query: 346 LASNKAEILLMDATGNPCLTIRRKKLTLADNWEVFDGESNVNPLYTVKKNINLLNSRLLA 167
           +A NK EI+LMDA+G P LTIRRK+L+L DNW V+DGE+  NP + ++K++NLL+S+ LA
Sbjct: 61  VAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGETAANPRFQMRKHLNLLSSKSLA 120

Query: 166 HVTAGCNDRSNKSVLYQIEGSYVQRCCTVYDDQRRLVSEIKQKEPVGGVSFGVDV 2
            V+ G +  S +  +Y+IEGSY QRCC VYD++RR V+EIK+KE + GV+ GVDV
Sbjct: 121 RVSGG-SSSSMRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMAGVALGVDV 174


>ref|XP_002519976.1| GTP binding protein, putative [Ricinus communis]
           gi|223540740|gb|EEF42300.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 215

 Score =  204 bits (518), Expect = 1e-50
 Identities = 106/182 (58%), Positives = 135/182 (74%), Gaps = 10/182 (5%)
 Frame = -2

Query: 517 MPKVYPN-AVASPPQAP----NPVSDRQVQVLTVWKKSLLFNCKGFTVFDAKGNLLFRVD 353
           M KVYPN A AS P       + +      VLTVWKKSLLFNC GFTV+D  GNL+FRVD
Sbjct: 1   MTKVYPNIAAASTPVVEKLKSSSLDTADAIVLTVWKKSLLFNCNGFTVYDGSGNLVFRVD 60

Query: 352 NYLASNKA--EILLMDATGNPCLTIRRKKLTLADNWEVFDGESNVNPLYTVKKNINLLNS 179
           NY+A + A  EI+LMDA G P LTIRRK+L+L DNW V+DGE+ VNPL++V+K++ +LN+
Sbjct: 61  NYMAGSGANGEIVLMDADGKPLLTIRRKRLSLGDNWLVYDGETAVNPLFSVRKHVKILNT 120

Query: 178 RLLAHVTAGCNDRS---NKSVLYQIEGSYVQRCCTVYDDQRRLVSEIKQKEPVGGVSFGV 8
           + LAHV+   +  S   +K+++Y+IEGSY QR C VYDD+ R V+EIKQKE VGGV+FGV
Sbjct: 121 KSLAHVSGNSSSGSTSNSKNIVYEIEGSYSQRSCAVYDDKHRRVAEIKQKEAVGGVAFGV 180

Query: 7   DV 2
           DV
Sbjct: 181 DV 182


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