BLASTX nr result
ID: Cimicifuga21_contig00016097
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00016097
(1096 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g... 140 4e-31
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g... 139 2e-30
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi... 133 9e-29
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub... 126 8e-27
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578... 126 1e-26
>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
gi|222861279|gb|EEE98821.1| f-box family protein [Populus
trichocarpa]
Length = 422
Score = 140 bits (354), Expect = 4e-31
Identities = 108/327 (33%), Positives = 168/327 (51%), Gaps = 19/327 (5%)
Frame = +3
Query: 138 TTMDRFPGEITTDILSRLPVQPSARCRCVCKLWCQILSDPKIQLNQLS-----TISPDVL 302
T M+ P EI DILSRLP+ + +CVC+ W ++ DP++ LS T P ++
Sbjct: 23 TGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLI 82
Query: 303 LYDSFSYQ--IHYLD--DKEEDKEALSTIKSLKIFTKPFISDTYYENPTILGSSRGLICI 470
L+ F + ++++D EE+KE + I + PF S ++GS GL+C+
Sbjct: 83 LHCDFPIRNNLYFVDFAAHEEEKEKVKRIPA------PFSS--MMPEFEVVGSCNGLLCL 134
Query: 471 SKTSYSVLPINPVYVINPITDQYLQLPHYTEPRGFPLCFHQKPGTKCLSGFGFEDSKQEY 650
S + Y+ + +Y+ NP T Y +LP Q P + +SGFGF +EY
Sbjct: 135 SDSLYN----DSLYIYNPFTGCYKELPKSL----------QYPDQEVVSGFGFNPKTKEY 180
Query: 651 KLVLAMLFAH------KKDTSQVMKNEVHILTLGSTTWTRKVGIVPDVLCQATKYGSSAF 812
K++ + + + + +EV ILTLG W R +G V + + S A
Sbjct: 181 KVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEW-RSLG---KVSYRLVRRASGAL 236
Query: 813 VNGCLHWMT-TVSSKDGKPIVSFNLGTEEFSFVPTPES---HKLSYSLGVIEENLSAVDY 980
VNG LHW++ +K + +VSF+L E+F V P+ ++ +Y L V+ LSA Y
Sbjct: 237 VNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAAVY 296
Query: 981 NHTQGDHHIWVMKKYNVKESWVKQFSI 1061
+ G IWVMK+YNVKESWVK+++I
Sbjct: 297 CN-YGRLEIWVMKEYNVKESWVKEYNI 322
>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
gi|222843314|gb|EEE80861.1| f-box family protein [Populus
trichocarpa]
Length = 408
Score = 139 bits (349), Expect = 2e-30
Identities = 104/326 (31%), Positives = 164/326 (50%), Gaps = 18/326 (5%)
Frame = +3
Query: 138 TTMDRFPGEITTDILSRLPVQPSARCRCVCKLWCQILSDPKIQLNQLS----TISPDVLL 305
T M+ P EI DILSRLP+ + +CVC+ W + DP++ LS P V+L
Sbjct: 23 TGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVIL 82
Query: 306 YDSFSYQ--IHYLD--DKEEDKEALSTIKSLKIFTKPFISDTYYENPTILGSSRGLICIS 473
+ F + ++++D EE+KE + I++ PF S ++GS GL+C+S
Sbjct: 83 HCDFPIRNNLYFVDFAAHEEEKEKVKRIRA------PFSS--MMPEFEVVGSCNGLLCLS 134
Query: 474 KTSYSVLPINPVYVINPITDQYLQLPHYTEPRGFPLCFHQKPGTKCLSGFGFEDSKQEYK 653
+ ++ + +Y+ NP T +Y +LP Q P + + GFGF EYK
Sbjct: 135 DSLFN----DSLYIYNPFTGRYKELPKSL----------QYPDQEVVFGFGFNPKTNEYK 180
Query: 654 LVLAMLFAHKKDTSQVMK------NEVHILTLGSTTWTRKVGIVPDVLCQATKYGSSAFV 815
++ + + + + ++V ILTLG W R +G V + + S V
Sbjct: 181 VIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGW-RSLG---KVSYRLVRRASETLV 236
Query: 816 NGCLHWMT-TVSSKDGKPIVSFNLGTEEFSFVPTPES---HKLSYSLGVIEENLSAVDYN 983
NG LHW++ +K + +VSF+L E+F VP P+ ++ Y L V+ LS Y
Sbjct: 237 NGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAVYC 296
Query: 984 HTQGDHHIWVMKKYNVKESWVKQFSI 1061
+ G IWVMK+YNVKESWVK+++I
Sbjct: 297 N-YGRLEIWVMKEYNVKESWVKEYNI 321
>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
gi|147785390|emb|CAN68678.1| hypothetical protein
VITISV_041941 [Vitis vinifera]
Length = 409
Score = 133 bits (334), Expect = 9e-29
Identities = 104/321 (32%), Positives = 162/321 (50%), Gaps = 15/321 (4%)
Frame = +3
Query: 144 MDRFPGEITTDILSRLPVQPSARCRCVCKLWCQILSDPKIQLNQL---STISPDVLLYDS 314
M+R P +I DILSRLPV + R VC+ W + D + L + +P ++L+
Sbjct: 27 MERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNPCLILHCD 86
Query: 315 FSY--QIHYLDDKEEDKEALSTIKSLKIFTKPF-ISDTYYENPTILGSSRGLICISKTSY 485
+ QI ++D E ++ ++ T PF S +E ++GS GL+C++ + +
Sbjct: 87 YPIRNQISFVDISAESRDK----DMVRKLTIPFWASMPEFE---VVGSCNGLLCLADSLF 139
Query: 486 SVLPINPVYVINPITDQYLQLPHYTEPRGFPLCFHQKPGTKCLSGFGFEDSKQEYKLVLA 665
+ VYV NP T + QLP Q P + + GFG+ + YK+V
Sbjct: 140 K----DAVYVHNPFTRDFKQLPKSL----------QYPDQEVVFGFGYHPMTEVYKVVKV 185
Query: 666 MLFAH------KKDTSQVMKNEVHILTLGSTTWTRKVGIVPDVLCQATKYGSSAFVNGCL 827
+ + + + ++EV +LTLGS TW R +G V Q ++ S A VNG L
Sbjct: 186 VYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTW-RSLG---KVSYQLDRWPSEALVNGRL 241
Query: 828 HWMTTVSSKDGKPIVSFNLGTEEFSFVPTPESHKLS---YSLGVIEENLSAVDYNHTQGD 998
HW+T + IVSF+L E+F +P P+ LS Y L V+ LSA + + G
Sbjct: 242 HWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSAA-VHRSNGK 300
Query: 999 HHIWVMKKYNVKESWVKQFSI 1061
+WVMK+Y+VKESW+K+F+I
Sbjct: 301 LEVWVMKEYDVKESWIKEFNI 321
>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328394|gb|EFH58813.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 415
Score = 126 bits (317), Expect = 8e-27
Identities = 104/328 (31%), Positives = 161/328 (49%), Gaps = 22/328 (6%)
Frame = +3
Query: 144 MDRFPGEITTDILSRLPVQPSARCRCVCKLWCQILSDPKIQLNQLSTISPDVLLY--DSF 317
++ PG+I DI SRLP+ AR VC+ W IL+ + S P +LL+
Sbjct: 24 LESLPGDIIADIFSRLPISSIARLMFVCRSWRSILTQHGRVSSSSSPTKPCLLLHCDSPI 83
Query: 318 SYQIHYLDDKEEDKEALSTIKSLKIFTKPFISDTYYENPTILGSSRGLICISKTSYSVLP 497
+H+LD EE+K IK+ K FT F ++ ++GS GL+C+S + Y+
Sbjct: 84 RNGLHFLDLSEEEKR----IKTKK-FTLRF--ESSMPEFDVVGSCNGLLCLSDSLYN--- 133
Query: 498 INPVYVINPITDQYLQLPHYTEPRGFPLCFHQKPGTKCLSGFGFEDSKQEYKLVLAMLFA 677
+ +Y+ NP T L+LP C ++ + + GFGF + ++YK++ + F
Sbjct: 134 -DSLYLYNPFTTNSLELPE---------CSNKYHDQELVFGFGFHEMTKDYKVLKIVYFR 183
Query: 678 HKKDTS----------QVMKNEVHILTLGSTT------WTRKVGIVPDVLCQATKYGSSA 809
++ Q ++EV ILTL S T W R +G P + K S A
Sbjct: 184 GSSSSNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSW-RSLGKAP---YKFMKRSSEA 239
Query: 810 FVNGCLHWMTTVSSK-DGKPIVSFNLGTEEFSFVPTPES---HKLSYSLGVIEENLSAVD 977
VNG LH++T + VSF+L EEF +P P+ ++ ++ L ++ L AV
Sbjct: 240 LVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVV 299
Query: 978 YNHTQGDHHIWVMKKYNVKESWVKQFSI 1061
Y + G IWVM+ Y VKESW K++SI
Sbjct: 300 YGN-YGKLDIWVMETYGVKESWGKEYSI 326
>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
unknown protein [Arabidopsis thaliana]
gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
[Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
At3g07870 [Arabidopsis thaliana]
gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
thaliana]
Length = 417
Score = 126 bits (316), Expect = 1e-26
Identities = 105/329 (31%), Positives = 161/329 (48%), Gaps = 23/329 (6%)
Frame = +3
Query: 144 MDRFPGEITTDILSRLPVQPSARCRCVCKLWCQILSDP-KIQLNQLSTISPDVLLYDSFS 320
++ P +I DI SRLP+ AR VC+ W +L+ ++ + S P +LL+
Sbjct: 25 LESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSP 84
Query: 321 YQ--IHYLDDKEEDKEALSTIKSLKIFTKPFISDTYYENPTILGSSRGLICISKTSYSVL 494
+ +H+LD EE+K IK+ K FT F S ++GS GL+C+S + Y+
Sbjct: 85 IRNGLHFLDLSEEEKR----IKTKK-FTLRFASSM--PEFDVVGSCNGLLCLSDSLYN-- 135
Query: 495 PINPVYVINPITDQYLQLPHYTEPRGFPLCFHQKPGTKCLSGFGFEDSKQEYKLVLAMLF 674
+ +Y+ NP T L+LP C ++ + + GFGF + +EYK++ + F
Sbjct: 136 --DSLYLYNPFTTNSLELPE---------CSNKYHDQELVFGFGFHEMTKEYKVLKIVYF 184
Query: 675 AHKKDTS----------QVMKNEVHILTLGSTT------WTRKVGIVPDVLCQATKYGSS 806
+ Q ++EV ILTL S T W R +G P + K S
Sbjct: 185 RGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSW-RSLGKAP---YKFVKRSSE 240
Query: 807 AFVNGCLHWMTTVSSK-DGKPIVSFNLGTEEFSFVPTPES---HKLSYSLGVIEENLSAV 974
A VNG LH++T + VSF+L EEF +P P+ ++ ++ L ++ L AV
Sbjct: 241 ALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAV 300
Query: 975 DYNHTQGDHHIWVMKKYNVKESWVKQFSI 1061
Y + G IWVMK Y VKESW K++SI
Sbjct: 301 VYGN-YGKLDIWVMKTYGVKESWGKEYSI 328