BLASTX nr result

ID: Cimicifuga21_contig00016061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016061
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002311150.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [V...    62   6e-08
dbj|BAA21923.1| ZPT2-14 [Petunia x hybrida]                            60   2e-07
ref|XP_002879670.1| zinc finger family protein [Arabidopsis lyra...    59   3e-07

>ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|222865345|gb|EEF02476.1|
           predicted protein [Populus trichocarpa]
           gi|355477194|gb|AES12473.1| C2H2-type zinc finger
           protein 1 [Populus trichocarpa]
          Length = 179

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/61 (57%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = +2

Query: 2   ALGGHMRRHRAXXXXXXXXXXXXXXPPP---QVIVPMFRRSNSKRVLCLDLNLTPLENDL 172
           ALGGHMRRHRA              PP    Q  VP+ +RSNS+RVLCLDLNLTP END+
Sbjct: 106 ALGGHMRRHRAALNDRNQVDPLN--PPSTDDQKAVPVVKRSNSRRVLCLDLNLTPYENDM 163

Query: 173 E 175
           E
Sbjct: 164 E 164


>ref|XP_002311150.1| predicted protein [Populus trichocarpa] gi|222850970|gb|EEE88517.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
 Frame = +2

Query: 2   ALGGHMRRHRAXXXXXXXXXXXXXXPPP--QVIVPMFRRSNSKRVLCLDLNLTPLENDLE 175
           ALGGHMRRHRA              P    + +VP+ ++SNS+RVLCLDLNLTP END+E
Sbjct: 106 ALGGHMRRHRAALNDQNQLADPLSPPSSDHKQVVPVVKKSNSRRVLCLDLNLTPNENDME 165


>ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [Vitis vinifera]
          Length = 176

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/66 (53%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
 Frame = +2

Query: 2   ALGGHMRRHRAXXXXXXXXXXXXXX----PPPQVIVPMFRRSNSKRVLCLDLNLTPLEN- 166
           ALGGHMRRHRA                  PPPQ   P+ ++ NS+RVLCLDLNLTPLEN 
Sbjct: 102 ALGGHMRRHRAAASGATQALSETTSSSSPPPPQA--PLLKKPNSRRVLCLDLNLTPLENI 159

Query: 167 DLEFPI 184
           DL+F +
Sbjct: 160 DLQFQL 165


>dbj|BAA21923.1| ZPT2-14 [Petunia x hybrida]
          Length = 166

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +2

Query: 2   ALGGHMRRHRAXXXXXXXXXXXXXXPPPQVIVPMFRRSNSKRVLCLDLNLTPLEND-LEF 178
           ALGGHMRRHRA                   + P+ ++SNS+RVLCLDLNLTPLEND LEF
Sbjct: 105 ALGGHMRRHRAVMNENNLQ-----------VTPVVKKSNSRRVLCLDLNLTPLENDNLEF 153

Query: 179 PI 184
            +
Sbjct: 154 KL 155


>ref|XP_002879670.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325509|gb|EFH55929.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/70 (50%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   ALGGHMRRHRAXXXXXXXXXXXXXXPPPQVIVPMFRR-SNSKRVLCLDLNLTPLENDLEF 178
           ALGGHMRRHR+               P    +P+ +R S+SKRVLCLDLNLTPLENDLE+
Sbjct: 108 ALGGHMRRHRSSMTVEPSFIS-----PVIPTMPVLKRCSSSKRVLCLDLNLTPLENDLEY 162

Query: 179 PIQNGFLENI 208
                F+  I
Sbjct: 163 IFGKTFVPKI 172


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