BLASTX nr result

ID: Cimicifuga21_contig00016039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016039
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83547.2| hypothetical protein, partial (mitochondrion) [N...   210   6e-52
ref|YP_717158.1| hypothetical protein BrnapMp061 [Brassica napus...   207   3e-51
gb|ACH78249.1| ORFX [Arabidopsis thaliana]                            207   5e-51
ref|YP_003587370.1| transport membrane protein [Cucurbita pepo] ...   204   2e-50
ref|YP_003875494.1| transport membrane protein [Silene latifolia...   204   3e-50

>dbj|BAD83547.2| hypothetical protein, partial (mitochondrion) [Nicotiana tabacum]
          Length = 276

 Score =  210 bits (534), Expect = 6e-52
 Identities = 100/119 (84%), Positives = 102/119 (85%)
 Frame = -1

Query: 357 NYISYEFHLALETILGEVRIRFVWILIGLGLTWFTCYWFSEEXXXXXXXXXXXXXLDSYF 178
           +YISYEF+ ALETILGEVRIRFVWILIGLGLTWFTCYWFSEE             LDSYF
Sbjct: 13  SYISYEFYFALETILGEVRIRFVWILIGLGLTWFTCYWFSEELIFLLAKPFLTLPLDSYF 72

Query: 177 VCTQLTEAFSTYVATSSIACLYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGSCF 1
           VCTQLTEAFSTYVATS IAC YFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSG CF
Sbjct: 73  VCTQLTEAFSTYVATSLIACSYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGFCF 131


>ref|YP_717158.1| hypothetical protein BrnapMp061 [Brassica napus]
           gi|37591105|dbj|BAC98907.1| hypothetical protein
           [Brassica napus]
          Length = 269

 Score =  207 bits (528), Expect = 3e-51
 Identities = 97/120 (80%), Positives = 101/120 (84%)
 Frame = -1

Query: 360 LNYISYEFHLALETILGEVRIRFVWILIGLGLTWFTCYWFSEEXXXXXXXXXXXXXLDSY 181
           + YISYEF+ ALETILGEVRIR VWILIGLGLTWFTCYWFSEE              DSY
Sbjct: 1   ITYISYEFYFALETILGEVRIRSVWILIGLGLTWFTCYWFSEELIFLLALPFLTLPFDSY 60

Query: 180 FVCTQLTEAFSTYVATSSIACLYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGSCF 1
           FVCTQLTEAFST++ATSSIAC YFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSG CF
Sbjct: 61  FVCTQLTEAFSTFIATSSIACSYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGFCF 120


>gb|ACH78249.1| ORFX [Arabidopsis thaliana]
          Length = 286

 Score =  207 bits (526), Expect = 5e-51
 Identities = 98/118 (83%), Positives = 100/118 (84%)
 Frame = -1

Query: 354 YISYEFHLALETILGEVRIRFVWILIGLGLTWFTCYWFSEEXXXXXXXXXXXXXLDSYFV 175
           YISYEF+ ALETILGEVRIR VWILIGLGLTWFTCYWFSEE              DSYFV
Sbjct: 11  YISYEFNFALETILGEVRIRSVWILIGLGLTWFTCYWFSEELIFLLALPFLTLPFDSYFV 70

Query: 174 CTQLTEAFSTYVATSSIACLYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGSCF 1
           CTQLTEAFST+VATSSIAC YFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSG CF
Sbjct: 71  CTQLTEAFSTFVATSSIACSYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGFCF 128


>ref|YP_003587370.1| transport membrane protein [Cucurbita pepo]
           gi|259156815|gb|ACV96676.1| transport membrane protein
           [Cucurbita pepo]
          Length = 271

 Score =  204 bits (520), Expect = 2e-50
 Identities = 100/122 (81%), Positives = 101/122 (82%), Gaps = 2/122 (1%)
 Frame = -1

Query: 360 LNY--ISYEFHLALETILGEVRIRFVWILIGLGLTWFTCYWFSEEXXXXXXXXXXXXXLD 187
           LNY  ISYEFH A ETILGEVRIRFVWILIGLGLTWFTCYWFSEE             LD
Sbjct: 8   LNYSTISYEFHFAPETILGEVRIRFVWILIGLGLTWFTCYWFSEELIFLLAKPFLTLPLD 67

Query: 186 SYFVCTQLTEAFSTYVATSSIACLYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGS 7
           SY VCTQLTEAFSTY+A SSIAC YFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSG 
Sbjct: 68  SYLVCTQLTEAFSTYLAMSSIACSYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGF 127

Query: 6   CF 1
           CF
Sbjct: 128 CF 129


>ref|YP_003875494.1| transport membrane protein [Silene latifolia]
           gi|301338038|gb|ADK73330.1| transport membrane protein
           [Silene latifolia]
          Length = 264

 Score =  204 bits (519), Expect = 3e-50
 Identities = 97/117 (82%), Positives = 99/117 (84%)
 Frame = -1

Query: 351 ISYEFHLALETILGEVRIRFVWILIGLGLTWFTCYWFSEEXXXXXXXXXXXXXLDSYFVC 172
           ISYEF  ALETILGEVRIRFVWILIGLGLTWFTCYWFSEE             LDSYFVC
Sbjct: 1   ISYEFDFALETILGEVRIRFVWILIGLGLTWFTCYWFSEELIFLLAKPFLTLPLDSYFVC 60

Query: 171 TQLTEAFSTYVATSSIACLYFVFPLISYQIWCFLIPSCYGEQRTKYNRFFYLSGSCF 1
           TQLTEAFSTYVATSSIAC YFVFP +S+QIWCFLIPSCYGEQRTKYNRFFYLSG CF
Sbjct: 61  TQLTEAFSTYVATSSIACSYFVFPFVSHQIWCFLIPSCYGEQRTKYNRFFYLSGFCF 117


Top