BLASTX nr result

ID: Cimicifuga21_contig00016022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016022
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94787.1| unknown [Populus trichocarpa]                          208   1e-51
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              204   2e-50
emb|CBI39533.3| unnamed protein product [Vitis vinifera]              199   6e-49
emb|CBI38323.3| unnamed protein product [Vitis vinifera]              199   6e-49
ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis...   199   6e-49

>gb|ABK94787.1| unknown [Populus trichocarpa]
          Length = 267

 Score =  208 bits (529), Expect = 1e-51
 Identities = 112/259 (43%), Positives = 149/259 (57%), Gaps = 6/259 (2%)
 Frame = +3

Query: 30  LSEGSVTHILSLTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYKDIXXXXXXXXXXX 209
           L E  + HI+S TSPRD               D D VW+ FLPSD+ +I           
Sbjct: 7   LPEECLAHIISFTSPRDACGSALVSRNFRSAADSDAVWKGFLPSDHVEIISSSPASSSSQ 66

Query: 210 XXXXXXXQL----CGDPILLDGGNKSFNLDKHSGKKCFMIGAKELTFIWGNSPQYWKWIS 377
                  +L    C +PIL++ G  SF L+KH GKKC+MIGA+ L+  WG++P YW W  
Sbjct: 67  LTALSKKELYFHLCNNPILVNNGIMSFALEKHGGKKCYMIGARGLSITWGDTPDYWTWKP 126

Query: 378 QPD-SRFAEVAELYYVWWLELGGKIETQMLSPKTTYVAYLVIKFAANGSHGFDGP-TQVS 551
            PD SRF+EVAEL YVWWL++ G+I+ ++ SPKTTY AYLV K   + + GFD    ++S
Sbjct: 127 LPDQSRFSEVAELRYVWWLDVRGRIDAKIFSPKTTYAAYLVFKL-TDSTRGFDERLVELS 185

Query: 552 VEFVXXXXXXXXXXTVYLDHECNRTPRPSNRGDGWMEIKMGEFYNDQGEDGEVEMTLKDV 731
           V F            + +  + +  P P  R DGWMEI+MGEF+ D  +DG V   L++V
Sbjct: 186 VNFEESVGEEKLHVFLDVPPDYDMPPLPRERSDGWMEIEMGEFFYDNEDDGSVVAYLREV 245

Query: 732 DCSRTKCGLIVQGIEFRPK 788
           D   TK GLI++GIEFRPK
Sbjct: 246 DNYTTKNGLIIEGIEFRPK 264


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  204 bits (518), Expect = 2e-50
 Identities = 115/266 (43%), Positives = 150/266 (56%), Gaps = 11/266 (4%)
 Frame = +3

Query: 24  SALSEGSVTHILSLTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYKDIXXXXXXXXX 203
           S+L EG +  +L+LTSPRD               + D +WE+FLP+DY++I         
Sbjct: 21  SSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESSS 80

Query: 204 XXXXXXXXX---QLCGDPILLDGGNKSFNLDKHSGKKCFMIGAKELTFIWGNSPQYWKWI 374
                        LC  P+L+D G KSF L+K SGKKC+M+ ++ELT IWG++P YW+W 
Sbjct: 81  WRHFSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWT 140

Query: 375 SQPDSRFAEVAELYYVWWLELGGKIETQMLSPKTTYVAYLVIKFAANGSHGF-DGPTQVS 551
           S P+SRF EVA L  V W E+ GKI T MLSP+T Y AYLV  F A  SHGF D P + S
Sbjct: 141 SLPESRFPEVAYLQAVCWFEIRGKINTCMLSPRTNYAAYLV--FHAGRSHGFEDVPVESS 198

Query: 552 VEFVXXXXXXXXXXTV-YLDHE------CNRTPRPSNRGDGWMEIKMGEFYNDQGEDGEV 710
           +E V             Y  +E       +  P P  R D W EI++GEF+ + GED E+
Sbjct: 199 IEIVGNETTTRVIYLARYRKNEEPTSSIRSDLPYPKKREDSWFEIELGEFFIEGGEDTEL 258

Query: 711 EMTLKDVDCSRTKCGLIVQGIEFRPK 788
           E+TL +V     K GLIV+GIE RPK
Sbjct: 259 EITLMEVKAGHWKDGLIVEGIEIRPK 284


>emb|CBI39533.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  199 bits (506), Expect = 6e-49
 Identities = 113/262 (43%), Positives = 154/262 (58%), Gaps = 1/262 (0%)
 Frame = +3

Query: 6   MQEVDISALSEGSVTHILSLTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYKDIXXX 185
           M+ +  + L EG V+ ILSLTSP D               + D+VWE+FLP+DY DI   
Sbjct: 1   MECLGFNKLPEGCVSIILSLTSPPDACKSSLVSPMFRAAAESDVVWERFLPADYHDILCR 60

Query: 186 XXXXXXXXXXXXXXXQLCGDPILLDGGNKSFNLDKHSGKKCFMIGAKELTFIWGNSPQYW 365
                          +LC DPIL+DGG+KSF LDK SGKK +++ A+EL+  W N P YW
Sbjct: 61  LVEPLVCSSRKELFLRLC-DPILIDGGSKSFRLDKWSGKKSYLLSARELSITWSNDPMYW 119

Query: 366 KWISQPDSRFAEVAELYYVWWLELGGKIETQMLSPKTTYVAYLVIKFAANGSHGFD-GPT 542
            W S P+SRF+ VAEL  + WLE+ GKI TQMLSP T Y AYL++K  +N ++G D  P+
Sbjct: 120 SWRSTPESRFSHVAELRTMCWLEIHGKIRTQMLSPNTKYGAYLIMKI-SNRAYGLDLMPS 178

Query: 543 QVSVEFVXXXXXXXXXXTVYLDHECNRTPRPSNRGDGWMEIKMGEFYNDQGEDGEVEMTL 722
           ++SVE V           +  D        P  R DGWME+++G+F+N +G D EV M+L
Sbjct: 179 EISVE-VSNSTQMLRSRVIEGDGRV-----PCEREDGWMELELGDFFNGEG-DEEVRMSL 231

Query: 723 KDVDCSRTKCGLIVQGIEFRPK 788
           ++V     K GLI++GIE R +
Sbjct: 232 REVKGYHLKGGLIIEGIEVRQR 253



 Score =  174 bits (441), Expect = 2e-41
 Identities = 103/242 (42%), Positives = 134/242 (55%), Gaps = 1/242 (0%)
 Frame = +3

Query: 15  VDISALSEGSVTHILSLTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYKDIXXXXXX 194
           V ++ L EG V+ ILSLTSP D               + D+VWE+FLP+DY DI      
Sbjct: 265 VGLNTLPEGCVSTILSLTSPPDACKSSLVSSIFRAAAESDVVWERFLPADYHDILSRLAE 324

Query: 195 XXXXXXXXXXXXQLCGDPILLDGGNKSFNLDKHSGKKCFMIGAKELTFIWGNSPQYWKWI 374
                       +LC DP L+DGG K F LDK SGK  +M+ A+EL+  W + P +W W 
Sbjct: 325 PLVVSSKKELFLRLC-DPSLIDGGKKRFRLDKWSGKNSYMMSARELSISWSHDPTHWSWT 383

Query: 375 SQPDSRFAEVAELYYVWWLELGGKIETQMLSPKTTYVAYLVIKFAANGSHGFD-GPTQVS 551
           S P+SRF+EVAEL  V  LE+ GKI TQMLSP T Y AYL+IK  +N + G D  P+++S
Sbjct: 384 SIPESRFSEVAELKTVCRLEIHGKIRTQMLSPNTKYGAYLIIKI-SNRAFGLDLMPSEIS 442

Query: 552 VEFVXXXXXXXXXXTVYLDHECNRTPRPSNRGDGWMEIKMGEFYNDQGEDGEVEMTLKDV 731
           VE            T   D    R P     GDGWME+++G+F+N +G D E+   L   
Sbjct: 443 VE--------VSNSTQVCD---GRVPCERRDGDGWMELELGDFFNGEG-DEEMNFELLPQ 490

Query: 732 DC 737
           DC
Sbjct: 491 DC 492



 Score =  142 bits (357), Expect = 1e-31
 Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
 Frame = +3

Query: 9    QEVDISALSEGSVTHILSLTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYKDIXXXX 188
            +E++   L +  ++HILS TSPRD               D D VWEKFLPSDY++I    
Sbjct: 481  EEMNFELLPQDCISHILSCTSPRDACRSGLVSTTVRHAGDSDSVWEKFLPSDYQEILSRL 540

Query: 189  XXXXXXXXXXXXXXQLCGDPILLDGGNKSFNLDKHSGKKCFMIGAKELTFIWGNSPQYWK 368
                          +LC  P+L+D G KSF++ K +G+K + + A+ L+  W ++  YW 
Sbjct: 541  VSPLVFASKKELYSKLCR-PLLIDEGRKSFSISKTTGEKGYTLSARNLSITWSSNALYWS 599

Query: 369  WISQPDSRFAEVAELYYVWWLELGGKIETQMLSPKTTYVAYLVIKFAANGSHGFDG-PTQ 545
            W     SRFAE  EL  + WLE+ GKI T MLSPKTTY AYL++KF A+ ++G D  P++
Sbjct: 600  WKPLLQSRFAETVELRTICWLEIQGKISTCMLSPKTTYRAYLIVKF-ADRAYGLDALPSE 658

Query: 546  VSV 554
            VSV
Sbjct: 659  VSV 661


>emb|CBI38323.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  199 bits (506), Expect = 6e-49
 Identities = 111/262 (42%), Positives = 147/262 (56%), Gaps = 4/262 (1%)
 Frame = +3

Query: 15  VDISALSEGSVTHILSLTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYKDIXXXXXX 194
           VD SAL E  +  IL+ TS RD               + D +WE FLP+DY++I      
Sbjct: 52  VDFSALPEDCIAGILARTSIRDACRMSTVSPEFLSAAESDALWETFLPADYREIIGRSSE 111

Query: 195 XXXXXXXXXXXX---QLCGDPILLDGGNKSFNLDKHSGKKCFMIGAKELTFIWGNSPQYW 365
                          +LC  P+L+DGG KSF LDK SGKKC+MI A+ELT IW  +P+YW
Sbjct: 112 SSARQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETPRYW 171

Query: 366 KWISQPDSRFAEVAELYYVWWLELGGKIETQMLSPKTTYVAYLVIKFAANGSHGFDGPTQ 545
            WIS P SRF EVA L  VWW  + GK+ T MLSP T Y AYL+  F  N    FDG   
Sbjct: 172 TWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAYLI--FQRNDI--FDGFED 227

Query: 546 VSVE-FVXXXXXXXXXXTVYLDHECNRTPRPSNRGDGWMEIKMGEFYNDQGEDGEVEMTL 722
             +E  +           +YLD E + +P P+ R DGW E+++GEF+N+  E  E+EM++
Sbjct: 228 NPIESSIGVTGGETAKKVIYLDPEHDISPNPT-RIDGWYEVELGEFFNEGRESVELEMSI 286

Query: 723 KDVDCSRTKCGLIVQGIEFRPK 788
            +V+    K GL+++GIE RPK
Sbjct: 287 MEVNTFIGKSGLLIEGIEIRPK 308


>ref|XP_002270580.1| PREDICTED: F-box protein PP2-B10-like [Vitis vinifera]
          Length = 277

 Score =  199 bits (506), Expect = 6e-49
 Identities = 111/262 (42%), Positives = 147/262 (56%), Gaps = 4/262 (1%)
 Frame = +3

Query: 15  VDISALSEGSVTHILSLTSPRDXXXXXXXXXXXXXXXDCDLVWEKFLPSDYKDIXXXXXX 194
           VD SAL E  +  IL+ TS RD               + D +WE FLP+DY++I      
Sbjct: 18  VDFSALPEDCIAGILARTSIRDACRMSTVSPEFLSAAESDALWETFLPADYREIIGRSSE 77

Query: 195 XXXXXXXXXXXX---QLCGDPILLDGGNKSFNLDKHSGKKCFMIGAKELTFIWGNSPQYW 365
                          +LC  P+L+DGG KSF LDK SGKKC+MI A+ELT IW  +P+YW
Sbjct: 78  SSARQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCYMIAARELTIIWSETPRYW 137

Query: 366 KWISQPDSRFAEVAELYYVWWLELGGKIETQMLSPKTTYVAYLVIKFAANGSHGFDGPTQ 545
            WIS P SRF EVA L  VWW  + GK+ T MLSP T Y AYL+  F  N    FDG   
Sbjct: 138 TWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAYLI--FQRNDI--FDGFED 193

Query: 546 VSVE-FVXXXXXXXXXXTVYLDHECNRTPRPSNRGDGWMEIKMGEFYNDQGEDGEVEMTL 722
             +E  +           +YLD E + +P P+ R DGW E+++GEF+N+  E  E+EM++
Sbjct: 194 NPIESSIGVTGGETAKKVIYLDPEHDISPNPT-RIDGWYEVELGEFFNEGRESVELEMSI 252

Query: 723 KDVDCSRTKCGLIVQGIEFRPK 788
            +V+    K GL+++GIE RPK
Sbjct: 253 MEVNTFIGKSGLLIEGIEIRPK 274


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