BLASTX nr result

ID: Cimicifuga21_contig00016013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016013
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602621.1| hypothetical protein MTR_3g096320 [Medicago ...   174   2e-41
ref|XP_003528049.1| PREDICTED: GDP-mannose transporter GONST1-li...   170   2e-40
ref|XP_002306247.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002522842.1| GDP-mannose transporter, putative [Ricinus c...   161   1e-37
ref|XP_004171371.1| PREDICTED: probable gamma-secretase subunit ...   161   1e-37

>ref|XP_003602621.1| hypothetical protein MTR_3g096320 [Medicago truncatula]
           gi|355491669|gb|AES72872.1| hypothetical protein
           MTR_3g096320 [Medicago truncatula]
           gi|388491508|gb|AFK33820.1| unknown [Medicago
           truncatula]
          Length = 133

 Score =  174 bits (440), Expect = 2e-41
 Identities = 84/123 (68%), Positives = 92/123 (74%), Gaps = 7/123 (5%)
 Frame = -3

Query: 586 NPN-NPEPL------WPTIXXXXXXXXXXXXSYARSFFKFGFFLLPWLWAVNCFFFWPVL 428
           NPN NP PL      WPTI             YAR F+KFGF LLP LWAVNCF+FWPV+
Sbjct: 10  NPNPNPNPLALSVPVWPTIDGPLGLSEEESVKYARRFYKFGFALLPLLWAVNCFYFWPVI 69

Query: 427 RHSSSFPRIRRYVVGSAIGFLVFAVLLSSWALTFSICGERLFGPVWETLVMYNVADKYGL 248
           RHS SFPRIR YVVGSA+GF VFA LL SWALTFSI GERLFGPVW+ LVMYN+AD++GL
Sbjct: 70  RHSHSFPRIRPYVVGSAVGFTVFATLLCSWALTFSIGGERLFGPVWDQLVMYNLADRFGL 129

Query: 247 TGW 239
           TGW
Sbjct: 130 TGW 132


>ref|XP_003528049.1| PREDICTED: GDP-mannose transporter GONST1-like [Glycine max]
          Length = 449

 Score =  170 bits (431), Expect = 2e-40
 Identities = 79/110 (71%), Positives = 86/110 (78%)
 Frame = -3

Query: 568 PLWPTIXXXXXXXXXXXXSYARSFFKFGFFLLPWLWAVNCFFFWPVLRHSSSFPRIRRYV 389
           P+WPTI             YAR F+KFGF LLP LWAVNCF+FWP LRHS SFPRIR YV
Sbjct: 339 PVWPTIDGPLGLSEEESVGYARRFYKFGFALLPLLWAVNCFYFWPALRHSHSFPRIRPYV 398

Query: 388 VGSAIGFLVFAVLLSSWALTFSICGERLFGPVWETLVMYNVADKYGLTGW 239
           VGSAIGF VFA LLSSWALTF+I GERLFGPVW+ LVMYN+AD+ GLTGW
Sbjct: 399 VGSAIGFAVFATLLSSWALTFAIGGERLFGPVWDQLVMYNLADRLGLTGW 448


>ref|XP_002306247.1| predicted protein [Populus trichocarpa] gi|222855696|gb|EEE93243.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score =  164 bits (414), Expect = 2e-38
 Identities = 78/124 (62%), Positives = 91/124 (73%)
 Frame = -3

Query: 610 NSTGLILGNPNNPEPLWPTIXXXXXXXXXXXXSYARSFFKFGFFLLPWLWAVNCFFFWPV 431
           N+T  IL +     P+WPTI            +YAR F+KFGF LLPWLWAVNCF+FWPV
Sbjct: 20  NNTNSILSST----PVWPTIDGPLGLTEDESLTYARRFYKFGFALLPWLWAVNCFYFWPV 75

Query: 430 LRHSSSFPRIRRYVVGSAIGFLVFAVLLSSWALTFSICGERLFGPVWETLVMYNVADKYG 251
           L +S SFPRIR YVV SA+GF VF  +L SWALTF+I GE+LFGPVW+ LVMYNVAD+ G
Sbjct: 76  LFNSRSFPRIRPYVVRSAVGFTVFTTVLCSWALTFAIGGEQLFGPVWDKLVMYNVADRLG 135

Query: 250 LTGW 239
           LTGW
Sbjct: 136 LTGW 139


>ref|XP_002522842.1| GDP-mannose transporter, putative [Ricinus communis]
           gi|223537926|gb|EEF39540.1| GDP-mannose transporter,
           putative [Ricinus communis]
          Length = 485

 Score =  161 bits (408), Expect = 1e-37
 Identities = 71/109 (65%), Positives = 83/109 (76%)
 Frame = -3

Query: 565 LWPTIXXXXXXXXXXXXSYARSFFKFGFFLLPWLWAVNCFFFWPVLRHSSSFPRIRRYVV 386
           +WPT+             YAR F+KFG+ LLPWLWAVNCF+FWP LR+S SFPRIR YV+
Sbjct: 376 VWPTVDGALGLSEEESIKYARRFYKFGYALLPWLWAVNCFYFWPALRNSRSFPRIRPYVI 435

Query: 385 GSAIGFLVFAVLLSSWALTFSICGERLFGPVWETLVMYNVADKYGLTGW 239
            SA+GF  F++LL SWALTF+I GERLFGPVW  LVMYNVAD+ GLTGW
Sbjct: 436 RSAVGFTAFSILLCSWALTFAIGGERLFGPVWNELVMYNVADRLGLTGW 484


>ref|XP_004171371.1| PREDICTED: probable gamma-secretase subunit PEN-2-like [Cucumis
           sativus]
          Length = 133

 Score =  161 bits (407), Expect = 1e-37
 Identities = 78/109 (71%), Positives = 86/109 (78%)
 Frame = -3

Query: 565 LWPTIXXXXXXXXXXXXSYARSFFKFGFFLLPWLWAVNCFFFWPVLRHSSSFPRIRRYVV 386
           LWPTI            SYAR F+KFGF LLP+LWAVNCF+FWPVLR S SFPRIR Y+V
Sbjct: 25  LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIV 83

Query: 385 GSAIGFLVFAVLLSSWALTFSICGERLFGPVWETLVMYNVADKYGLTGW 239
           GSAIGF VF  ++SSWALTFSI GERLFGPVW+ LVMYN+ADK GLTGW
Sbjct: 84  GSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKVGLTGW 132


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