BLASTX nr result

ID: Cimicifuga21_contig00016010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016010
         (2166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-l...   141   8e-31
ref|XP_003572803.1| PREDICTED: protein FAR1-RELATED SEQUENCE 4-l...   127   1e-26
gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   124   1e-25
ref|NP_001068457.2| Os11g0681400 [Oryza sativa Japonica Group] g...   118   7e-24
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...   114   1e-22

>ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-like [Brachypodium
            distachyon]
          Length = 561

 Score =  141 bits (355), Expect = 8e-31
 Identities = 75/196 (38%), Positives = 117/196 (59%), Gaps = 10/196 (5%)
 Frame = -2

Query: 1694 NKNECVD-NCNEDIVDVREDMGNEVVQEEKRGEPEV---------GMLFDSVDELLDYYI 1545
            N +E  D + + D   + +   N V  EE +GEP+V         GM FD+ +++  YY 
Sbjct: 7    NVHESSDMSISSDDDGIEQQKKNNVRVEENQGEPQVDVILEDPELGMTFDTENDVRQYYK 66

Query: 1544 EYGNEKGFSVKKRSSRKGDDGEVRWVVFACSRSGKTERTSRNASKMHTTSKTECNAKLNA 1365
             Y   KGF V +RSS + D+G+++++   CS  GKTE  S+N  K + T+   C AK+N 
Sbjct: 67   NYAKAKGFGVTRRSSNRDDNGQLKYLTLCCSCHGKTESNSKNMLKPNPTAGLGCKAKVNI 126

Query: 1364 ALGSDGKWRVTSVVVNHNHELSPGKSRHYKKNRIMRPIVKRRLEMNDKASIKLNNDYDSS 1185
              G DG + +++V+ +HNH LSP  SR ++ N+ +   VKRRLE+ND+A I++N +++S 
Sbjct: 127  VRGPDGTFHLSTVISDHNHTLSPHTSRLFRCNKRLNFNVKRRLELNDRAGIRVNKNFNSL 186

Query: 1184 VVEMGGQRNVSFLEKE 1137
            VV   G  N++F EKE
Sbjct: 187  VVAADGHENLTFGEKE 202


>ref|XP_003572803.1| PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Brachypodium
            distachyon]
          Length = 573

 Score =  127 bits (319), Expect = 1e-26
 Identities = 62/164 (37%), Positives = 103/164 (62%)
 Frame = -2

Query: 1628 EVVQEEKRGEPEVGMLFDSVDELLDYYIEYGNEKGFSVKKRSSRKGDDGEVRWVVFACSR 1449
            E + +   G+P+ G++FDS D+ + +Y  Y   KGF V +R++R GDD ++ +   ACSR
Sbjct: 29   EEIGDSLDGQPKKGIMFDSEDDAVRFYKGYAKTKGFGVVRRTARHGDDRKLNYFTLACSR 88

Query: 1448 SGKTERTSRNASKMHTTSKTECNAKLNAALGSDGKWRVTSVVVNHNHELSPGKSRHYKKN 1269
             GK + +S+N+   +  ++ +C AK+N A   + K+ +TSV ++HNH  SP KSR  + +
Sbjct: 89   QGKAQYSSKNSYNPNPLTRMQCPAKVNFACRGE-KFCITSVTLDHNHPTSPSKSRFLRSH 147

Query: 1268 RIMRPIVKRRLEMNDKASIKLNNDYDSSVVEMGGQRNVSFLEKE 1137
            + +    KR LE+ND+A I++N ++ S V+E GG   + F EKE
Sbjct: 148  KKLDLHAKRMLELNDQAGIRMNKNFGSLVMEAGGYEQLEFGEKE 191


>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 1116

 Score =  124 bits (311), Expect = 1e-25
 Identities = 68/193 (35%), Positives = 113/193 (58%)
 Frame = -2

Query: 1715 METEVLVNKNECVDNCNEDIVDVREDMGNEVVQEEKRGEPEVGMLFDSVDELLDYYIEYG 1536
            +ET    +  E VD+ NE+     E++   +VQ ++  EP +GM F S +E++ YY  Y 
Sbjct: 318  VETGSTSSVQEEVDHINENS---DENLEANIVQADE--EPRIGMTFSSEEEVIKYYKSYA 372

Query: 1535 NEKGFSVKKRSSRKGDDGEVRWVVFACSRSGKTERTSRNASKMHTTSKTECNAKLNAALG 1356
               GF   K +S+   DG+ ++    C+R+      S+N  K + T + +C A++N ++ 
Sbjct: 373  RCMGFGTVKINSKNAKDGK-KYFTLGCTRARSYVSNSKNLLKPNPTIRAQCMARVNMSMS 431

Query: 1355 SDGKWRVTSVVVNHNHELSPGKSRHYKKNRIMRPIVKRRLEMNDKASIKLNNDYDSSVVE 1176
             DGK  +T V + HNH LSP KSR+++ N+ + P  KRRL++ND+A I ++ ++ S VVE
Sbjct: 432  LDGKITITKVALEHNHGLSPTKSRYFRCNKNLDPHTKRRLDINDQAGINVSRNFRSMVVE 491

Query: 1175 MGGQRNVSFLEKE 1137
              G  N++F EK+
Sbjct: 492  ANGYDNLTFGEKD 504


>ref|NP_001068457.2| Os11g0681400 [Oryza sativa Japonica Group]
            gi|255680367|dbj|BAF28820.2| Os11g0681400 [Oryza sativa
            Japonica Group]
          Length = 715

 Score =  118 bits (295), Expect = 7e-24
 Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 10/197 (5%)
 Frame = -2

Query: 1697 VNKNECVDNCNED----------IVDVREDMGNEVVQEEKRGEPEVGMLFDSVDELLDYY 1548
            ++ N C D+  ED          I +V  D    V  + K  EP    +       L + 
Sbjct: 1    MDTNLCSDDEQEDHIISDEDGFAIEEVESDSNALVADKTKLLEPTKVRIVP-----LAFT 55

Query: 1547 IEYGNEKGFSVKKRSSRKGDDGEVRWVVFACSRSGKTERTSRNASKMHTTSKTECNAKLN 1368
            + Y  + GF V KR S+K +DG+VR+   ACSR GK + TS N  K + +++ +C AK+N
Sbjct: 56   LSYARKLGFGVIKRGSKKTEDGKVRYFTLACSRQGKAQYTSTNKFKPNPSTRQQCPAKVN 115

Query: 1367 AALGSDGKWRVTSVVVNHNHELSPGKSRHYKKNRIMRPIVKRRLEMNDKASIKLNNDYDS 1188
              L  D K+ ++++ ++HNH +SP K+RH + ++ +    KRRLE+ND+A I++N ++ S
Sbjct: 116  FYL-HDEKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLELNDQARIRINKNFSS 174

Query: 1187 SVVEMGGQRNVSFLEKE 1137
             V++ GG  N+ F EKE
Sbjct: 175  LVMQAGGYENLQFGEKE 191


>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 862

 Score =  114 bits (285), Expect = 1e-22
 Identities = 56/131 (42%), Positives = 89/131 (67%)
 Frame = -2

Query: 1529 KGFSVKKRSSRKGDDGEVRWVVFACSRSGKTERTSRNASKMHTTSKTECNAKLNAALGSD 1350
            KGF V KR S+K +DG+VR+   ACSR GK + TS N  K + +++ +C AK+N  L  D
Sbjct: 46   KGFGVIKRGSKKTEDGKVRYFTLACSRQGKAQYTSTNKFKPNPSTRQQCPAKVNFYL-HD 104

Query: 1349 GKWRVTSVVVNHNHELSPGKSRHYKKNRIMRPIVKRRLEMNDKASIKLNNDYDSSVVEMG 1170
             K+ ++++ ++HNH +SP K+RH + ++ +    KRRLE+ND+A I++N ++ S V++ G
Sbjct: 105  EKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQAG 164

Query: 1169 GQRNVSFLEKE 1137
            G  N+ F EKE
Sbjct: 165  GYENLQFGEKE 175


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