BLASTX nr result

ID: Cimicifuga21_contig00015951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015951
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vini...   140   1e-31
ref|XP_002516453.1| histone deacetylase, putative [Ricinus commu...   129   3e-28
gb|AAM34784.1|AF510671_1 HDA2 [Arabidopsis thaliana]                  126   2e-27
ref|NP_568480.2| histone deacetylase 2 [Arabidopsis thaliana] gi...   126   2e-27
ref|NP_851078.1| histone deacetylase 2 [Arabidopsis thaliana] gi...   126   2e-27

>ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vinifera]
           gi|296081627|emb|CBI20632.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/86 (77%), Positives = 75/86 (87%)
 Frame = -1

Query: 259 FSNDRRVYILDMYNTQVYPCDLEARSYIDHKVEVLTGTTTDVYLERVDKALEVAGNMFDP 80
           FSNDRRVYILDMYN  +YP D EAR YID KVEV++GTTT+ YL ++D+AL+VAG MFDP
Sbjct: 217 FSNDRRVYILDMYNPGIYPSDFEARRYIDQKVEVVSGTTTNEYLTKLDEALKVAGRMFDP 276

Query: 79  ELVVYNAGTDILDGDPLGGLKISPNG 2
           ELVVYNAGTDILDGDPLG LKISP G
Sbjct: 277 ELVVYNAGTDILDGDPLGRLKISPEG 302


>ref|XP_002516453.1| histone deacetylase, putative [Ricinus communis]
           gi|223544273|gb|EEF45794.1| histone deacetylase,
           putative [Ricinus communis]
          Length = 342

 Score =  129 bits (324), Expect = 3e-28
 Identities = 61/86 (70%), Positives = 70/86 (81%)
 Frame = -1

Query: 259 FSNDRRVYILDMYNTQVYPCDLEARSYIDHKVEVLTGTTTDVYLERVDKALEVAGNMFDP 80
           F +D R+YILDMYN  +YP D EAR+YID KVE+ +GT TD YL  +D+ALEVA   FDP
Sbjct: 224 FYDDNRIYILDMYNPGIYPLDYEARNYIDQKVEIASGTRTDEYLRELDEALEVADQKFDP 283

Query: 79  ELVVYNAGTDILDGDPLGGLKISPNG 2
           ELVVYNAGTDILDGDPLG LKISP+G
Sbjct: 284 ELVVYNAGTDILDGDPLGRLKISPDG 309


>gb|AAM34784.1|AF510671_1 HDA2 [Arabidopsis thaliana]
          Length = 340

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/84 (70%), Positives = 70/84 (83%)
 Frame = -1

Query: 253 NDRRVYILDMYNTQVYPCDLEARSYIDHKVEVLTGTTTDVYLERVDKALEVAGNMFDPEL 74
           +D RVYILDMYN ++YP D  AR +ID KVEV++GTTTD YL ++D+ALEVA   F PEL
Sbjct: 204 DDNRVYILDMYNPEIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVASRNFQPEL 263

Query: 73  VVYNAGTDILDGDPLGGLKISPNG 2
           V+YNAGTDILDGDPLG LKISP+G
Sbjct: 264 VIYNAGTDILDGDPLGLLKISPDG 287


>ref|NP_568480.2| histone deacetylase 2 [Arabidopsis thaliana]
           gi|145558941|sp|Q944K3.2|HDA2_ARATH RecName:
           Full=Histone deacetylase 2 gi|332006134|gb|AED93517.1|
           histone deacetylase 2 [Arabidopsis thaliana]
          Length = 387

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/84 (70%), Positives = 70/84 (83%)
 Frame = -1

Query: 253 NDRRVYILDMYNTQVYPCDLEARSYIDHKVEVLTGTTTDVYLERVDKALEVAGNMFDPEL 74
           +D RVYILDMYN ++YP D  AR +ID KVEV++GTTTD YL ++D+ALEVA   F PEL
Sbjct: 251 DDNRVYILDMYNPEIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVASRNFQPEL 310

Query: 73  VVYNAGTDILDGDPLGGLKISPNG 2
           V+YNAGTDILDGDPLG LKISP+G
Sbjct: 311 VIYNAGTDILDGDPLGLLKISPDG 334


>ref|NP_851078.1| histone deacetylase 2 [Arabidopsis thaliana]
           gi|332006133|gb|AED93516.1| histone deacetylase 2
           [Arabidopsis thaliana]
          Length = 359

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/84 (70%), Positives = 70/84 (83%)
 Frame = -1

Query: 253 NDRRVYILDMYNTQVYPCDLEARSYIDHKVEVLTGTTTDVYLERVDKALEVAGNMFDPEL 74
           +D RVYILDMYN ++YP D  AR +ID KVEV++GTTTD YL ++D+ALEVA   F PEL
Sbjct: 223 DDNRVYILDMYNPEIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVASRNFQPEL 282

Query: 73  VVYNAGTDILDGDPLGGLKISPNG 2
           V+YNAGTDILDGDPLG LKISP+G
Sbjct: 283 VIYNAGTDILDGDPLGLLKISPDG 306


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