BLASTX nr result

ID: Cimicifuga21_contig00015950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015950
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vini...   456   e-126
ref|XP_002516453.1| histone deacetylase, putative [Ricinus commu...   434   e-119
ref|XP_003589022.1| Histone deacetylase [Medicago truncatula] gi...   429   e-118
ref|XP_003550277.1| PREDICTED: histone deacetylase 2-like [Glyci...   426   e-117
gb|AFK34923.1| unknown [Lotus japonicus]                              420   e-115

>ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vinifera]
           gi|296081627|emb|CBI20632.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  456 bits (1174), Expect = e-126
 Identities = 222/284 (78%), Positives = 245/284 (86%)
 Frame = -2

Query: 853 DAETLKMSRVLSSKLYFDVPLSKVPLIYSSSYNIAFFGMEKLHPFDSLKWGRICQFLITE 674
           DAETL+  R+LSSKLYFDVPL+KVP+IYSSSY+IAF GMEKLHPFDS KWGRIC+FLI +
Sbjct: 19  DAETLRRGRILSSKLYFDVPLTKVPIIYSSSYDIAFLGMEKLHPFDSSKWGRICRFLILD 78

Query: 673 GVLESNRIIEPLEASTEDLLVVHXXXXXXXXXXXXXXXEIIGVPPLALLPNFVVQKKALY 494
           G LE N I+EPLEAS +DLLVVH                II VPP+ALLPN +VQ+K LY
Sbjct: 79  GALEKNHIVEPLEASKDDLLVVHSESYLNSLKTSLNVAVIIEVPPVALLPNCLVQQKVLY 138

Query: 493 PFRKQVGGTILAAKIAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFIQLNIS 314
           PFRKQVGGTILAAK+AKERGWAINVGGGFHHCSA KGGGFCAYADISLCIH+AFI+LNIS
Sbjct: 139 PFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAGKGGGFCAYADISLCIHYAFIRLNIS 198

Query: 313 RVMIIDLDAHQGNGHEMDFSNDRRVFILDMYNPQIYPCDLEARNYIDHKVEVLTGTTTDV 134
           RVMIIDLDAHQGNGHE+DFSNDRRV+ILDMYNP IYP D EAR YID KVEV++GTTT+ 
Sbjct: 199 RVMIIDLDAHQGNGHELDFSNDRRVYILDMYNPGIYPSDFEARRYIDQKVEVVSGTTTNE 258

Query: 133 YLERLDKALEVAGNMFDPELVVYNAGTDILDGDPLGGLKISPNG 2
           YL +LD+AL+VAG MFDPELVVYNAGTDILDGDPLG LKISP G
Sbjct: 259 YLTKLDEALKVAGRMFDPELVVYNAGTDILDGDPLGRLKISPEG 302


>ref|XP_002516453.1| histone deacetylase, putative [Ricinus communis]
           gi|223544273|gb|EEF45794.1| histone deacetylase,
           putative [Ricinus communis]
          Length = 342

 Score =  434 bits (1116), Expect = e-119
 Identities = 206/284 (72%), Positives = 239/284 (84%)
 Frame = -2

Query: 853 DAETLKMSRVLSSKLYFDVPLSKVPLIYSSSYNIAFFGMEKLHPFDSLKWGRICQFLITE 674
           D+ TL+ +R++SSKLYFD+PLSKVP+IYS +Y+I+F G+EKLHPFDS KWGR+C+FL+TE
Sbjct: 26  DSLTLRRNRIISSKLYFDIPLSKVPIIYSPAYDISFLGIEKLHPFDSSKWGRVCRFLVTE 85

Query: 673 GVLESNRIIEPLEASTEDLLVVHXXXXXXXXXXXXXXXEIIGVPPLALLPNFVVQKKALY 494
           GVL+ N I+EPLEAS +DLLVVH                II VPP++L PN +VQ+K L+
Sbjct: 86  GVLDKNSIVEPLEASKDDLLVVHLESYLSSLRSSANVATIIEVPPVSLFPNCLVQQKVLF 145

Query: 493 PFRKQVGGTILAAKIAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFIQLNIS 314
           PFRKQVGGTILAAK+AKERGWAINVGGGFHHCS+ KGGGFCAYADISLCIHFAF++L IS
Sbjct: 146 PFRKQVGGTILAAKLAKERGWAINVGGGFHHCSSGKGGGFCAYADISLCIHFAFVRLRIS 205

Query: 313 RVMIIDLDAHQGNGHEMDFSNDRRVFILDMYNPQIYPCDLEARNYIDHKVEVLTGTTTDV 134
           RVMIIDLDAHQGNGHEMDF +D R++ILDMYNP IYP D EARNYID KVE+ +GT TD 
Sbjct: 206 RVMIIDLDAHQGNGHEMDFYDDNRIYILDMYNPGIYPLDYEARNYIDQKVEIASGTRTDE 265

Query: 133 YLERLDKALEVAGNMFDPELVVYNAGTDILDGDPLGGLKISPNG 2
           YL  LD+ALEVA   FDPELVVYNAGTDILDGDPLG LKISP+G
Sbjct: 266 YLRELDEALEVADQKFDPELVVYNAGTDILDGDPLGRLKISPDG 309


>ref|XP_003589022.1| Histone deacetylase [Medicago truncatula]
           gi|355478070|gb|AES59273.1| Histone deacetylase
           [Medicago truncatula]
          Length = 350

 Score =  429 bits (1103), Expect = e-118
 Identities = 208/282 (73%), Positives = 241/282 (85%)
 Frame = -2

Query: 847 ETLKMSRVLSSKLYFDVPLSKVPLIYSSSYNIAFFGMEKLHPFDSLKWGRICQFLITEGV 668
           +TL  +R+LS+KLYFDVP SKVPLIYS SY+I+F G+EKLHPFDS KWGRIC+FLI+ GV
Sbjct: 12  DTLMRNRILSTKLYFDVPPSKVPLIYSDSYDISFLGIEKLHPFDSSKWGRICKFLISFGV 71

Query: 667 LESNRIIEPLEASTEDLLVVHXXXXXXXXXXXXXXXEIIGVPPLALLPNFVVQKKALYPF 488
           L+ NRI+EPLEAS +DLLVVH               +II VPP+AL PN +VQ+K L+PF
Sbjct: 72  LDKNRIVEPLEASKDDLLVVHSESYLNSLKESSNVAKIIEVPPVALFPNCLVQRKVLFPF 131

Query: 487 RKQVGGTILAAKIAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFIQLNISRV 308
           RKQVGGTILAAK+AKERGWAINVGGGFHHCSAE GGGFCAYADISLCIHFAF+QLNISRV
Sbjct: 132 RKQVGGTILAAKLAKERGWAINVGGGFHHCSAENGGGFCAYADISLCIHFAFVQLNISRV 191

Query: 307 MIIDLDAHQGNGHEMDFSNDRRVFILDMYNPQIYPCDLEARNYIDHKVEVLTGTTTDVYL 128
           +IIDLDAHQGNGHEMDF++D RV+ILDMYNP IYP D EAR+YI+ KVEV +GT T+ YL
Sbjct: 192 IIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYPLDHEARSYINQKVEVKSGTRTEEYL 251

Query: 127 ERLDKALEVAGNMFDPELVVYNAGTDILDGDPLGGLKISPNG 2
            +LD+ALEVAG  F+PEL+VYNAGTDIL+GDPLG LKISP+G
Sbjct: 252 LKLDEALEVAGRRFNPELLVYNAGTDILEGDPLGRLKISPDG 293


>ref|XP_003550277.1| PREDICTED: histone deacetylase 2-like [Glycine max]
          Length = 348

 Score =  426 bits (1094), Expect = e-117
 Identities = 203/284 (71%), Positives = 240/284 (84%)
 Frame = -2

Query: 853 DAETLKMSRVLSSKLYFDVPLSKVPLIYSSSYNIAFFGMEKLHPFDSLKWGRICQFLITE 674
           DAE L+ +R+LSSKLYFDV  SKVPLIYS+SY+I F G+EKLHPFDS KWGRIC FL++ 
Sbjct: 8   DAEALRRNRILSSKLYFDVSPSKVPLIYSASYDIEFLGIEKLHPFDSSKWGRICGFLVSF 67

Query: 673 GVLESNRIIEPLEASTEDLLVVHXXXXXXXXXXXXXXXEIIGVPPLALLPNFVVQKKALY 494
           G+L+   ++EPLEAS +DLLVVH                I+ VPP+AL+PN +VQ+K L+
Sbjct: 68  GILDKKCVVEPLEASKDDLLVVHSESYLNTLKQSSKVAMIVEVPPVALIPNCLVQQKVLF 127

Query: 493 PFRKQVGGTILAAKIAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFIQLNIS 314
           PFRKQVGGTILAAK+AKERGWAIN+GGGFHHCSA+KGGGFCAYADISLCIHFAF++LNIS
Sbjct: 128 PFRKQVGGTILAAKLAKERGWAINMGGGFHHCSAQKGGGFCAYADISLCIHFAFVRLNIS 187

Query: 313 RVMIIDLDAHQGNGHEMDFSNDRRVFILDMYNPQIYPCDLEARNYIDHKVEVLTGTTTDV 134
           RVMIIDLDAHQGNGHEMDF+ D RV+ILDMYNP IYP D EARNYI+ KVEV +GT T+ 
Sbjct: 188 RVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTVTEE 247

Query: 133 YLERLDKALEVAGNMFDPELVVYNAGTDILDGDPLGGLKISPNG 2
           YL++LD+ALEVAG+ F+PELV+YNAGTDIL+GDPLG L+ISP G
Sbjct: 248 YLQKLDEALEVAGHRFNPELVIYNAGTDILEGDPLGRLEISPEG 291


>gb|AFK34923.1| unknown [Lotus japonicus]
          Length = 348

 Score =  420 bits (1079), Expect = e-115
 Identities = 205/284 (72%), Positives = 233/284 (82%)
 Frame = -2

Query: 853 DAETLKMSRVLSSKLYFDVPLSKVPLIYSSSYNIAFFGMEKLHPFDSLKWGRICQFLITE 674
           DA  L  +R+LSSKLYFDVP SKVPLIYS SY+I+F G+EKLHPFDS KWGRIC FL++ 
Sbjct: 9   DALALARNRILSSKLYFDVPPSKVPLIYSESYDISFLGIEKLHPFDSSKWGRICGFLVSF 68

Query: 673 GVLESNRIIEPLEASTEDLLVVHXXXXXXXXXXXXXXXEIIGVPPLALLPNFVVQKKALY 494
            VL+   I+EPLEAS +DLLVVH                II VPP+AL PN +VQ K L+
Sbjct: 69  DVLDKKCIVEPLEASKDDLLVVHSESYLNSLKESSNVATIIEVPPVALFPNCLVQNKVLF 128

Query: 493 PFRKQVGGTILAAKIAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFIQLNIS 314
           PFRKQVGGTILA K+AKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAF++LNIS
Sbjct: 129 PFRKQVGGTILAVKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFVRLNIS 188

Query: 313 RVMIIDLDAHQGNGHEMDFSNDRRVFILDMYNPQIYPCDLEARNYIDHKVEVLTGTTTDV 134
           RVMIIDLDAHQGNGHE DF++D RV+ILDMYNP IYP D +ARNYI+ KVEV +GT T+ 
Sbjct: 189 RVMIIDLDAHQGNGHETDFADDSRVYILDMYNPGIYPWDYDARNYINQKVEVKSGTLTEE 248

Query: 133 YLERLDKALEVAGNMFDPELVVYNAGTDILDGDPLGGLKISPNG 2
           YL++LD+ALEVA   F PELV+YNAGTDILDGDPLG LKISP+G
Sbjct: 249 YLQKLDEALEVAARRFKPELVIYNAGTDILDGDPLGRLKISPDG 292


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