BLASTX nr result
ID: Cimicifuga21_contig00015910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00015910
(2384 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN33838.1| pre-mRNA splicing factor [Cucumis melo subsp. melo] 926 0.0
ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-lik... 924 0.0
ref|XP_004155354.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 923 0.0
ref|XP_004135243.1| PREDICTED: pre-mRNA-processing factor 17-lik... 923 0.0
ref|XP_002312609.1| predicted protein [Populus trichocarpa] gi|2... 920 0.0
>gb|ADN33838.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]
Length = 581
Score = 926 bits (2394), Expect = 0.0
Identities = 436/553 (78%), Positives = 477/553 (86%)
Frame = -1
Query: 2114 KTSAPKVDDTMFALTVADTNRTLNKPIDPVQHVVQFNPTYEQLWAPIYGPAHPFAKDGIA 1935
KTSAPKVDDTM ALTVA+ N+TL+KPIDP QH+V FNPTY+QLWAPIYGP+HP+AKDGIA
Sbjct: 35 KTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIA 94
Query: 1934 QGMRNHKLGFVENAAINPFLFDEQYNTFHKYGYAADPSGSMGNNYVGDLERLKETDGISV 1755
QGMRNHKLGFVENA+I PF+FDEQYNTFHKYGYAADPS S GNNY+GD+E L++ D ISV
Sbjct: 95 QGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALQKNDAISV 154
Query: 1754 YNIPQHXXXXXXXXXXXXXXXXXENDNPAEDLDLEQVENPASEEWLKKNRKSPWSGKKVG 1575
YNIPQH N++ E+++ +V+NPAS+ WL KNRKSPWSGKK G
Sbjct: 155 YNIPQHEQKKRKIEKKKEMSE---NEDMEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEG 211
Query: 1574 LTTELTEEQXXXXXXXXXXXXXXERGGDRDKGEAVVDKTTFHGKEEKDYQGRSWIXXXXX 1395
L TELTEEQ + G +KGE DK+TFHGKEE+DYQGRSWI
Sbjct: 212 LQTELTEEQKKYAEEYAKKKGEEKGG---EKGEVTADKSTFHGKEERDYQGRSWIAPPKD 268
Query: 1394 XXXXXXKCYMPKRWIHTWSGHTKGVSAIRFFPKQGHLLLSAGMDSKVKIWDVFNSGKCMR 1215
CY+PKR +HTWSGHTKGVSAIRFFPK GHL+LSAGMD+KVKIWDVFNSGKCMR
Sbjct: 269 AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMR 328
Query: 1214 TYMGHGKGVRDISFSNDGTKFLSAGFDKNIKYWDTETGQVISSFSTGKIPYVVKLNPDDD 1035
TYMGH + VRDISF NDG+KFL+AG+DK IKYWDTETGQVIS+FSTGKIPYVVKLNPDDD
Sbjct: 329 TYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDD 388
Query: 1034 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVWE 855
KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVD+NRRFVTSSDDKSLRVWE
Sbjct: 389 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 448
Query: 854 FGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 675
FGIPVVIKYISEPHMHSMP+IS+HPN+NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI
Sbjct: 449 FGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 508
Query: 674 VAGYACQVNFSPDGQYVMSGDGEGKCWFWNWKTCKVSRTLKCHEGVCIGCEWHPLEQSKV 495
VAGYACQVNFSPDG++VMSGDGEGKCWFW+WKTCKV RTLKCHEGVCIGCEWHPLEQSKV
Sbjct: 509 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKV 568
Query: 494 ATCGWDGLIKYWD 456
ATCGWDGLIKYWD
Sbjct: 569 ATCGWDGLIKYWD 581
>ref|XP_002262666.1| PREDICTED: pre-mRNA-processing factor 17-like [Vitis vinifera]
Length = 583
Score = 924 bits (2387), Expect = 0.0
Identities = 438/552 (79%), Positives = 474/552 (85%)
Frame = -1
Query: 2114 KTSAPKVDDTMFALTVADTNRTLNKPIDPVQHVVQFNPTYEQLWAPIYGPAHPFAKDGIA 1935
K+SAPKVDDT AL +A+TN +KPIDP+QHVV FNPTY+QLWAPIYGPAHP+AKDGIA
Sbjct: 42 KSSAPKVDDTTLALAIANTN---DKPIDPIQHVVPFNPTYDQLWAPIYGPAHPYAKDGIA 98
Query: 1934 QGMRNHKLGFVENAAINPFLFDEQYNTFHKYGYAADPSGSMGNNYVGDLERLKETDGISV 1755
QGMRNHKLGFVENAAI PF+FDEQYNTFHKYGYAADPS S GNNYVGDLE L++ DGISV
Sbjct: 99 QGMRNHKLGFVENAAIEPFIFDEQYNTFHKYGYAADPSASAGNNYVGDLEALEKNDGISV 158
Query: 1754 YNIPQHXXXXXXXXXXXXXXXXXENDNPAEDLDLEQVENPASEEWLKKNRKSPWSGKKVG 1575
YNIPQH ED+D+E+V+NPA++ WL KN+KSPW+GKK G
Sbjct: 159 YNIPQHEQKKRKIEKKKES-----ESEENEDVDVEEVQNPATDTWLLKNKKSPWAGKKEG 213
Query: 1574 LTTELTEEQXXXXXXXXXXXXXXERGGDRDKGEAVVDKTTFHGKEEKDYQGRSWIXXXXX 1395
L TELTEEQ + G +KGE V DK+TFHGKEE+DYQGRSWI
Sbjct: 214 LQTELTEEQKKYAEEYAKKKGEEK--GAAEKGEFVTDKSTFHGKEERDYQGRSWIAPPKD 271
Query: 1394 XXXXXXKCYMPKRWIHTWSGHTKGVSAIRFFPKQGHLLLSAGMDSKVKIWDVFNSGKCMR 1215
CY+PKR +HTWSGHTKGVSAIRFFPK GHL+LSAGMD+KVKIWDVFNSGKCMR
Sbjct: 272 AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMR 331
Query: 1214 TYMGHGKGVRDISFSNDGTKFLSAGFDKNIKYWDTETGQVISSFSTGKIPYVVKLNPDDD 1035
TYMGH K VRDISF NDGTKFL+AG+DKNIKYWDTETGQVIS+FSTGKIPYVVKLNPDDD
Sbjct: 332 TYMGHSKAVRDISFCNDGTKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDD 391
Query: 1034 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVWE 855
KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVD+NRRFVTSSDDKSLRVWE
Sbjct: 392 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 451
Query: 854 FGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 675
FGIPVVIKYISEPHMHSMP+ISLHPN+NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI
Sbjct: 452 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 511
Query: 674 VAGYACQVNFSPDGQYVMSGDGEGKCWFWNWKTCKVSRTLKCHEGVCIGCEWHPLEQSKV 495
AGYACQVNFSPDG++VMSGDGEGKCWFW+WK+CKV RTLKCHEGVCIGCEWHPLEQSKV
Sbjct: 512 AAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 571
Query: 494 ATCGWDGLIKYW 459
ATCGWDGLIKYW
Sbjct: 572 ATCGWDGLIKYW 583
>ref|XP_004155354.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing factor 17-like
[Cucumis sativus]
Length = 580
Score = 923 bits (2386), Expect = 0.0
Identities = 436/552 (78%), Positives = 477/552 (86%)
Frame = -1
Query: 2114 KTSAPKVDDTMFALTVADTNRTLNKPIDPVQHVVQFNPTYEQLWAPIYGPAHPFAKDGIA 1935
KTSAPKVDDTM ALTVA+ N+TL+KPIDP QH+V FNPTY+QLWAPIYGP+HP+AKDGIA
Sbjct: 35 KTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIA 94
Query: 1934 QGMRNHKLGFVENAAINPFLFDEQYNTFHKYGYAADPSGSMGNNYVGDLERLKETDGISV 1755
QGMRNHKLGFVENA+I PF+FDEQYNTFHKYGYAADPS S GNNY+GD+E L++ D ISV
Sbjct: 95 QGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALEKNDAISV 154
Query: 1754 YNIPQHXXXXXXXXXXXXXXXXXENDNPAEDLDLEQVENPASEEWLKKNRKSPWSGKKVG 1575
YNIPQH N++ E+++ +V+NPAS+ WL KNRKSPWSGKK G
Sbjct: 155 YNIPQHEQKKRKIEKKKKXSE---NEDMEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEG 211
Query: 1574 LTTELTEEQXXXXXXXXXXXXXXERGGDRDKGEAVVDKTTFHGKEEKDYQGRSWIXXXXX 1395
L TELTEEQ + G +KGE DK+TFHGKEE+DYQGRSWI
Sbjct: 212 LQTELTEEQKKYAEEYAKKKGEEKGG---EKGEVTSDKSTFHGKEERDYQGRSWIAPPKD 268
Query: 1394 XXXXXXKCYMPKRWIHTWSGHTKGVSAIRFFPKQGHLLLSAGMDSKVKIWDVFNSGKCMR 1215
CY+PKR +HTWSGHTKGVSAIRFFPK GHL+LSAGMD+KVKIWDVFNSGKCMR
Sbjct: 269 AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMR 328
Query: 1214 TYMGHGKGVRDISFSNDGTKFLSAGFDKNIKYWDTETGQVISSFSTGKIPYVVKLNPDDD 1035
TYMGH + VRDISF NDG+KFL+AG+DK IKYWDTETGQVIS+FSTGKIPYVVKLNPDDD
Sbjct: 329 TYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDD 388
Query: 1034 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVWE 855
KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVD+NRRFVTSSDDKSLRVWE
Sbjct: 389 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 448
Query: 854 FGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 675
FGIPVVIKYISEPHMHSMP+IS+HPN+NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI
Sbjct: 449 FGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 508
Query: 674 VAGYACQVNFSPDGQYVMSGDGEGKCWFWNWKTCKVSRTLKCHEGVCIGCEWHPLEQSKV 495
VAGYACQVNFSPDG++VMSGDGEGKCWFW+WKTCKV RTLKCHEGVCIGCEWHPLEQSKV
Sbjct: 509 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKV 568
Query: 494 ATCGWDGLIKYW 459
ATCGWDGLIKYW
Sbjct: 569 ATCGWDGLIKYW 580
>ref|XP_004135243.1| PREDICTED: pre-mRNA-processing factor 17-like [Cucumis sativus]
Length = 580
Score = 923 bits (2386), Expect = 0.0
Identities = 435/552 (78%), Positives = 476/552 (86%)
Frame = -1
Query: 2114 KTSAPKVDDTMFALTVADTNRTLNKPIDPVQHVVQFNPTYEQLWAPIYGPAHPFAKDGIA 1935
KTSAPKVDDTM ALTVA+ N+TL+KPIDP QH+V FNPTY+QLWAPIYGP+HP+AKDGIA
Sbjct: 35 KTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIA 94
Query: 1934 QGMRNHKLGFVENAAINPFLFDEQYNTFHKYGYAADPSGSMGNNYVGDLERLKETDGISV 1755
QGMRNHKLGFVENA+I PF+FDEQYNTFHKYGYAADPS S GNNY+GD+E L++ D ISV
Sbjct: 95 QGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALEKNDAISV 154
Query: 1754 YNIPQHXXXXXXXXXXXXXXXXXENDNPAEDLDLEQVENPASEEWLKKNRKSPWSGKKVG 1575
YNIPQH N++ E+++ +V+NPAS+ WL KNRKSPWSGKK G
Sbjct: 155 YNIPQHEQKKRKIEKKKEMSE---NEDMEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEG 211
Query: 1574 LTTELTEEQXXXXXXXXXXXXXXERGGDRDKGEAVVDKTTFHGKEEKDYQGRSWIXXXXX 1395
L TELTEEQ + G +KGE DK+TFHGKEE+DYQGRSWI
Sbjct: 212 LQTELTEEQKKYAEEYAKKKGEEKGG---EKGEVTSDKSTFHGKEERDYQGRSWIAPPKD 268
Query: 1394 XXXXXXKCYMPKRWIHTWSGHTKGVSAIRFFPKQGHLLLSAGMDSKVKIWDVFNSGKCMR 1215
CY+PKR +HTWSGHTKGVSAIRFFPK GHL+LSAGMD+KVKIWDVFNSGKCMR
Sbjct: 269 AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMR 328
Query: 1214 TYMGHGKGVRDISFSNDGTKFLSAGFDKNIKYWDTETGQVISSFSTGKIPYVVKLNPDDD 1035
TYMGH + VRDISF NDG+KFL+AG+DK IKYWDTETGQVIS+FSTGKIPYVVKLNPDDD
Sbjct: 329 TYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDD 388
Query: 1034 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVWE 855
KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVD+NRRFVTSSDDKSLRVWE
Sbjct: 389 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 448
Query: 854 FGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 675
FGIPVVIKYISEPHMHSMP+IS+HPN+NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI
Sbjct: 449 FGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 508
Query: 674 VAGYACQVNFSPDGQYVMSGDGEGKCWFWNWKTCKVSRTLKCHEGVCIGCEWHPLEQSKV 495
VAGYACQVNFSPDG++VMSGDGEGKCWFW+WKTCKV RTLKCHEGVCIGCEWHPLEQSKV
Sbjct: 509 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKV 568
Query: 494 ATCGWDGLIKYW 459
ATCGWDGLIKYW
Sbjct: 569 ATCGWDGLIKYW 580
>ref|XP_002312609.1| predicted protein [Populus trichocarpa] gi|222852429|gb|EEE89976.1|
predicted protein [Populus trichocarpa]
Length = 581
Score = 920 bits (2378), Expect = 0.0
Identities = 438/553 (79%), Positives = 475/553 (85%)
Frame = -1
Query: 2114 KTSAPKVDDTMFALTVADTNRTLNKPIDPVQHVVQFNPTYEQLWAPIYGPAHPFAKDGIA 1935
K++APKVDDTM ALTVA N+TL+KPIDPVQH V FNPTY+QLWAP+ GPAHP+AKDGIA
Sbjct: 36 KSAAPKVDDTMLALTVA--NQTLSKPIDPVQHAVAFNPTYDQLWAPVLGPAHPYAKDGIA 93
Query: 1934 QGMRNHKLGFVENAAINPFLFDEQYNTFHKYGYAADPSGSMGNNYVGDLERLKETDGISV 1755
QGMRNHKLGFVENAAI+ F+FDEQYNTFHKYGYAADPS S GNNYVGDL+ L++T+GISV
Sbjct: 94 QGMRNHKLGFVENAAIDSFVFDEQYNTFHKYGYAADPSASAGNNYVGDLDTLEKTNGISV 153
Query: 1754 YNIPQHXXXXXXXXXXXXXXXXXENDNPAEDLDLEQVENPASEEWLKKNRKSPWSGKKVG 1575
YNIPQH + + +D E+VENPA++ WL KNRKSPW+GKK G
Sbjct: 154 YNIPQHEQKKRKIEKKREVTEEEGDGDDV--MDKEEVENPATDAWLMKNRKSPWAGKKEG 211
Query: 1574 LTTELTEEQXXXXXXXXXXXXXXERGGDRDKGEAVVDKTTFHGKEEKDYQGRSWIXXXXX 1395
L TEL+EEQ G +KGE V DKTTFHGKEE+DYQGRSW+
Sbjct: 212 LQTELSEEQQKYAEEHARKKAEKAGG---EKGEVVADKTTFHGKEERDYQGRSWLAPPKD 268
Query: 1394 XXXXXXKCYMPKRWIHTWSGHTKGVSAIRFFPKQGHLLLSAGMDSKVKIWDVFNSGKCMR 1215
CY+PKR +HTWSGHTKGVSAIRFFPK GHL+LSAGMD+KVKIWDVFNSGKCMR
Sbjct: 269 AKASNDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMR 328
Query: 1214 TYMGHGKGVRDISFSNDGTKFLSAGFDKNIKYWDTETGQVISSFSTGKIPYVVKLNPDDD 1035
TYMGH K VRDISF NDGTKFL+A +DKNIKYWDTETGQVIS+FSTGKIPYVVKLNPDDD
Sbjct: 329 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDD 388
Query: 1034 KQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVWE 855
KQNILLAGMSDKKIVQWDMN+GQITQEYDQHLGAVNTITFVD+NRRFVTSSDDKSLRVWE
Sbjct: 389 KQNILLAGMSDKKIVQWDMNSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 448
Query: 854 FGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 675
FGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI
Sbjct: 449 FGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 508
Query: 674 VAGYACQVNFSPDGQYVMSGDGEGKCWFWNWKTCKVSRTLKCHEGVCIGCEWHPLEQSKV 495
VAGYACQVNFSPDG++VMSGDGEGKCWFW+WK+CKV RTLKCHEGVCIGCEWHPLEQSKV
Sbjct: 509 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 568
Query: 494 ATCGWDGLIKYWD 456
ATCGWDGLIKYWD
Sbjct: 569 ATCGWDGLIKYWD 581