BLASTX nr result

ID: Cimicifuga21_contig00015893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015893
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28838.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...   102   3e-20
emb|CBI26678.3| unnamed protein product [Vitis vinifera]               98   7e-19
ref|XP_002277459.1| PREDICTED: condensin complex subunit 2-like,...    97   1e-18
ref|XP_002529335.1| Condensin complex subunit, putative [Ricinus...    96   3e-18

>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  102 bits (255), Expect = 3e-20
 Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
 Frame = +2

Query: 260 ASMASSLLQSPIA---PPPGDQSQRCKSAPMTEIFLNCIKLARENKINQKNAWGLPLIDH 430
           A+ A+S+ +  +A   PPP D         + E+F NCIKLA ENKINQKN W L LIDH
Sbjct: 46  AARAASIRRKSVAAHAPPPPDPDPCLGKEQILELFQNCIKLASENKINQKNTWELNLIDH 105

Query: 431 ISEIIKAEAEDDVKTDFQKASSALEAGVKIYASRV 535
           + EIIK E EDD +T+FQKAS  LEAGVKIY+ RV
Sbjct: 106 LCEIIKVEEEDDAETNFQKASCTLEAGVKIYSLRV 140


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score =  102 bits (255), Expect = 3e-20
 Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
 Frame = +2

Query: 260 ASMASSLLQSPIA---PPPGDQSQRCKSAPMTEIFLNCIKLARENKINQKNAWGLPLIDH 430
           A+ A+S+ +  +A   PPP D         + E+F NCIKLA ENKINQKN W L LIDH
Sbjct: 46  AARAASIRRKSVAAHAPPPPDPDPCLGKEQILELFQNCIKLASENKINQKNTWELNLIDH 105

Query: 431 ISEIIKAEAEDDVKTDFQKASSALEAGVKIYASRV 535
           + EIIK E EDD +T+FQKAS  LEAGVKIY+ RV
Sbjct: 106 LCEIIKVEEEDDAETNFQKASCTLEAGVKIYSLRV 140


>emb|CBI26678.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 50/84 (59%), Positives = 61/84 (72%)
 Frame = +2

Query: 284 QSPIAPPPGDQSQRCKSAPMTEIFLNCIKLARENKINQKNAWGLPLIDHISEIIKAEAED 463
           Q+P  PP        +   + E+F NCIKLAREN INQKN WGL LIDH+SEII+ +AE+
Sbjct: 20  QTPSDPP----DPFLEKEQIIELFQNCIKLARENIINQKNTWGLKLIDHLSEIIRVDAEE 75

Query: 464 DVKTDFQKASSALEAGVKIYASRV 535
           D +T+FQKAS  LEAGVKIY+ RV
Sbjct: 76  DTETNFQKASCTLEAGVKIYSLRV 99


>ref|XP_002277459.1| PREDICTED: condensin complex subunit 2-like, partial [Vitis
           vinifera]
          Length = 583

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/63 (73%), Positives = 54/63 (85%)
 Frame = +2

Query: 347 EIFLNCIKLARENKINQKNAWGLPLIDHISEIIKAEAEDDVKTDFQKASSALEAGVKIYA 526
           E+F NCIKLAREN INQKN WGL LIDH+SEII+ +AE+D +T+FQKAS  LEAGVKIY+
Sbjct: 56  ELFQNCIKLARENIINQKNTWGLKLIDHLSEIIRVDAEEDTETNFQKASCTLEAGVKIYS 115

Query: 527 SRV 535
            RV
Sbjct: 116 LRV 118


>ref|XP_002529335.1| Condensin complex subunit, putative [Ricinus communis]
           gi|223531206|gb|EEF33052.1| Condensin complex subunit,
           putative [Ricinus communis]
          Length = 584

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = +2

Query: 260 ASMASSLLQSPIAPPPGDQSQRC-KSAPMTEIFLNCIKLARENKINQKNAWGLPLIDHIS 436
           A++   L+ S      G+ S  C     + ++F NCIKLA ENKINQKN W L LIDH+ 
Sbjct: 45  AAIRRKLITSNTTNQSGENSDPCLDKQQILDLFQNCIKLASENKINQKNTWELNLIDHLC 104

Query: 437 EIIKAEAEDDVKTDFQKASSALEAGVKIYASRV 535
           EIIK E E DV+T+FQKAS  LEAGVKIY+ RV
Sbjct: 105 EIIKVEDEQDVETNFQKASCTLEAGVKIYSLRV 137


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