BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015890
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   165   4e-39
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   165   5e-39
ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   164   7e-39
ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   164   1e-38

>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  169 bits (427), Expect = 4e-40
 Identities = 94/199 (47%), Positives = 118/199 (59%), Gaps = 35/199 (17%)
 Frame = +2

Query: 65  QFYFCFQCNRTVSIPPSPTSDLVCPTCNGGFLQEYINPNP--NPLNIFSGVPLM---FSS 229
           Q YFC+QC+RTV+I PSPTSDL CP C  GFL+E  +PNP  NP++   G  ++   F+S
Sbjct: 11  QLYFCYQCDRTVTITPSPTSDLSCPNCQEGFLEECESPNPSSNPVDSGLGPAILLDEFAS 70

Query: 230 SSGG------GSTNRVGVRVTXXXXXXXXXXXXNRFSFIQLLIEQL-------------- 349
             GG       S N      +            N F+F+Q  ++ +              
Sbjct: 71  IFGGMAPTPRSSNNSTTTNSSSASPLFQDPDGFNPFAFLQNYLQTMRAGGANIQFVIENN 130

Query: 350 ----------FSEPVVVGDYAIGPGLEQLIEQLAENDPNRFGTPPASKSAVESLPDVKIS 499
                     F  P  +GDY IGPGLEQLI+QLAENDPNR+GTPPASKSAVE+LPD+K++
Sbjct: 131 SGMGGMDTTGFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVENLPDIKVT 190

Query: 500 KELMESDYSQCAVCKDEFE 556
           KEL+ESD SQCAVCKD FE
Sbjct: 191 KELLESDSSQCAVCKDSFE 209


>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
           vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
           ubiquitin-protein ligase RING1 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score =  165 bits (418), Expect = 4e-39
 Identities = 99/224 (44%), Positives = 125/224 (55%), Gaps = 41/224 (18%)
 Frame = +2

Query: 8   SSTAENGGDGGGTTLHSRHQFYFCFQCNRTVSIPPSPTSDLVCPTCNGGFLQEYINPNPN 187
           S  +  GG GGG+   +  Q YFC+QCN TVSI PSPTSD +CP CN GFL+E  NPNPN
Sbjct: 7   SGGSGGGGPGGGS---AAPQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPN 63

Query: 188 PL-----NIFSGV-----------------PLMFSSSSGGGSTNRVGVRVTXXXXXXXXX 301
           P+     N F G                  PL+FS+++GG    +  V            
Sbjct: 64  PIPVPIPNPFLGFSDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV--DFPGLFGADP 121

Query: 302 XXXNRFSFIQLLIEQL-------------------FSEPVVVGDYAIGPGLEQLIEQLAE 424
              + F+F+Q  ++ L                   F     +GDY IGPGLEQLI+QLAE
Sbjct: 122 DAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSPNLGDYFIGPGLEQLIQQLAE 181

Query: 425 NDPNRFGTPPASKSAVESLPDVKISKELMESDYSQCAVCKDEFE 556
           NDPNR+GTPPASKSA+E LP ++I+ EL+ +D SQCAVCKD FE
Sbjct: 182 NDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFE 225


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  165 bits (417), Expect = 5e-39
 Identities = 98/218 (44%), Positives = 123/218 (56%), Gaps = 41/218 (18%)
 Frame = +2

Query: 26  GGDGGGTTLHSRHQFYFCFQCNRTVSIPPSPTSDLVCPTCNGGFLQEYINPNPNPL---- 193
           GG GGG+   +  Q YFC+QCN TVSI PSPTSD +CP CN GFL+E  NPNPNP+    
Sbjct: 15  GGPGGGS---AAPQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNPIPVPI 71

Query: 194 -NIFSGV-----------------PLMFSSSSGGGSTNRVGVRVTXXXXXXXXXXXXNRF 319
            N F G                  PL+FS+++GG    +  V               + F
Sbjct: 72  PNPFLGFSDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV--DFPGLFGADPDAFHPF 129

Query: 320 SFIQLLIEQL-------------------FSEPVVVGDYAIGPGLEQLIEQLAENDPNRF 442
           +F+Q  ++ L                   F     +GDY IGPGLEQLI+QLAENDPNR+
Sbjct: 130 AFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSPNLGDYFIGPGLEQLIQQLAENDPNRY 189

Query: 443 GTPPASKSAVESLPDVKISKELMESDYSQCAVCKDEFE 556
           GTPPASKSA+E LP ++I+ EL+ +D SQCAVCKD FE
Sbjct: 190 GTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFE 227


>ref|XP_004137524.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Cucumis sativus] gi|449439503|ref|XP_004137525.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Cucumis sativus]
           gi|449439505|ref|XP_004137526.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
           sativus] gi|449503086|ref|XP_004161827.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 1 [Cucumis
           sativus] gi|449503089|ref|XP_004161828.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 2 [Cucumis
           sativus] gi|449503091|ref|XP_004161829.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like isoform 3 [Cucumis
           sativus]
          Length = 378

 Score =  164 bits (416), Expect = 7e-39
 Identities = 95/232 (40%), Positives = 124/232 (53%), Gaps = 48/232 (20%)
 Frame = +2

Query: 5   MSSTAENGGDGGGTTLHSRH-QFYFCFQCNRTVSIPPSPTSDLVCPTCNGGFLQEYINPN 181
           MSS+  N GDG G  + S   Q YFC+ CNRTV+I PS +SDL+CP CN  F++E  +PN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 182 PNPLNIFS---------------------GVPLMFSSSSGGGSTNRVGVRVTXXXXXXXX 298
           PNP  + +                     G P++FS++S  G     G  +         
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 299 XXXXNRFSF--------------------IQLLIEQLFSEPVV------VGDYAIGPGLE 400
               +  S                     +QL+I+    E         +GDY  GPGLE
Sbjct: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180

Query: 401 QLIEQLAENDPNRFGTPPASKSAVESLPDVKISKELMESDYSQCAVCKDEFE 556
           QLI+QLAENDPNR+GTPPASKSA+E LPD+KI++EL+ +D SQCAVCKD FE
Sbjct: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFE 232


>ref|XP_003549174.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 369

 Score =  164 bits (414), Expect = 1e-38
 Identities = 96/207 (46%), Positives = 115/207 (55%), Gaps = 30/207 (14%)
 Frame = +2

Query: 26  GGDGGGTTLHSRHQFYFCFQCNRTVSIPPSPTSDLVCPTCNGGFLQEYI----NPNPNPL 193
           GGD GG       + YFC QCNRTVSI PSP+SDL+CPTCNGGFL+E      NPNPNP 
Sbjct: 5   GGDRGGGATSGDPRQYFCHQCNRTVSISPSPSSDLLCPTCNGGFLEELEFPIPNPNPNPP 64

Query: 194 NIF---------SGVPLMFSSSSG-----------GGSTNRVGVRVTXXXXXXXXXXXXN 313
           N F         + +PL+   ++            G   +                    
Sbjct: 65  NPFFPDFPLAGAATIPLVLPGAAASPPFEDLSALFGNRPDAAADAFNPLVFLQNYFQTLR 124

Query: 314 RFSFIQLLIEQ-----LFSEPVVV-GDYAIGPGLEQLIEQLAENDPNRFGTPPASKSAVE 475
               +QL+IE       F  P V  GDY  GPGLE+LI+ LAENDPNR+GTPPASKS VE
Sbjct: 125 AGGNLQLVIESGDPGGAFRFPGVTHGDYFFGPGLEELIQHLAENDPNRYGTPPASKSVVE 184

Query: 476 SLPDVKISKELMESDYSQCAVCKDEFE 556
            LPDV +++EL+ SD SQCAVCKD FE
Sbjct: 185 GLPDVSVTEELLASDSSQCAVCKDTFE 211