BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015889
         (1659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   200   1e-48
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   194   6e-47
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...   181   4e-43
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   181   5e-43
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...   174   5e-41

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  200 bits (508), Expect = 1e-48
 Identities = 137/406 (33%), Positives = 197/406 (48%), Gaps = 27/406 (6%)
 Frame = -2

Query: 1403 EKKKGRKEQQNLLVEMEKLPSETVSNILSRLPVDSLSQSRSVCKTWYKSIYDPYFVRKHL 1224
            +++K + E       ME LP E   +ILSRLP+ SL Q + VC+ W   + DP  V  +L
Sbjct: 10   KRRKTKVEYDPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYL 69

Query: 1223 QLLAAQNKGTSQVLLMKKHENSDCEFHYVEYDDENRYKIIKLNYPPIQCNCKYRAIVGSC 1044
                        +L       ++  F      +E + K+ ++  P      ++  +VGSC
Sbjct: 70   SCSTQDTDHPCLILHCDFPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMMPEFE-VVGSC 128

Query: 1043 NGLICISEHVNNDPIYVCNPMTSECIHLPKLSDIPTHSDNRSLSLVVVRGFGYNPSTDEY 864
            NGL+C+S+ + ND +Y+ NP T     LPK    P           VV GFG+NP T EY
Sbjct: 129  NGLLCLSDSLYNDSLYIYNPFTGCYKELPKSLQYPDQE--------VVSGFGFNPKTKEY 180

Query: 863  KVVRILFNQPNRKSFE---------GQVQVYTLGKDTEWRRKGAAPYFLRWQLSGVLVNG 711
            KV+RI++ +     +           +VQ+ TLG   EWR  G   Y L  + SG LVNG
Sbjct: 181  KVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCP-EWRSLGKVSYRLVRRASGALVNG 239

Query: 710  ALHWITEIVDVFNKDYCNKIVAFNLANEEFQVVPPAPCFLSGKNNYDLVELGGNLCVTEY 531
             LHWI+      NK    ++V+F+L +E+F+ V    C    + NY LV L G L    Y
Sbjct: 240  RLHWISR--PCRNKP-ARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAAVY 296

Query: 530  LFYGHINIWMIKDYIGKDSAWTKEYTIG---------NEGQSNHLYK---------AFAL 405
              YG + IW++K+Y  K+S W KEY IG         N+ +   ++K         A  +
Sbjct: 297  CNYGRLEIWVMKEYNVKES-WVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCV 355

Query: 404  TKDGEVLLWRNGVILVSYDPKTGTLTNIEDHGKVKRLEAVPHVKSL 267
             K+GE+LL     +LVSYDPK G   +IE  G     + V HV SL
Sbjct: 356  LKNGEILLEYKNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGSL 401


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  194 bits (493), Expect = 6e-47
 Identities = 132/408 (32%), Positives = 198/408 (48%), Gaps = 29/408 (7%)
 Frame = -2

Query: 1403 EKKKGRKEQQNLLVEMEKLPSETVSNILSRLPVDSLSQSRSVCKTWYKSIYDPYFVRKHL 1224
            +++K + E       ME LP E   +ILSRLP+ SL + + VC+ W     DP  V  +L
Sbjct: 10   KRRKTKLEDDPQTTGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYL 69

Query: 1223 QLLAAQNKGTSQVLLMKKHENSDCEFHYVEY--DDENRYKIIKLNYPPIQCNCKYRAIVG 1050
               +   + T   +++          ++V++   +E + K+ ++  P      ++  +VG
Sbjct: 70   ---SCSTQETDPCVILHCDFPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPEFE-VVG 125

Query: 1049 SCNGLICISEHVNNDPIYVCNPMTSECIHLPKLSDIPTHSDNRSLSLVVVRGFGYNPSTD 870
            SCNGL+C+S+ + ND +Y+ NP T     LPK    P           VV GFG+NP T+
Sbjct: 126  SCNGLLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQE--------VVFGFGFNPKTN 177

Query: 869  EYKVVRILFNQPNRKSFE---------GQVQVYTLGKDTEWRRKGAAPYFLRWQLSGVLV 717
            EYKV+RI++ +     +           QVQ+ TLG    WR  G   Y L  + S  LV
Sbjct: 178  EYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPG-WRSLGKVSYRLVRRASETLV 236

Query: 716  NGALHWITEIVDVFNKDYCNKIVAFNLANEEFQVVPPAPCFLSGKNNYDLVELGGNLCVT 537
            NG LHW++      NK    ++V+F+L +E+F+ VP   C    + +Y L  L G L V 
Sbjct: 237  NGRLHWVSR--PCRNKP-ARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVA 293

Query: 536  EYLFYGHINIWMIKDYIGKDSAWTKEYTIG------------------NEGQSNHLYKAF 411
             Y  YG + IW++K+Y  K+S W KEY IG                      +    +A 
Sbjct: 294  VYCNYGRLEIWVMKEYNVKES-WVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRAL 352

Query: 410  ALTKDGEVLLWRNGVILVSYDPKTGTLTNIEDHGKVKRLEAVPHVKSL 267
             + K+GE+LL      LVSYDPK G   +I+  G  K  + V HV SL
Sbjct: 353  CVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSL 400


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
            gi|223543465|gb|EEF44996.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 401

 Score =  181 bits (460), Expect = 4e-43
 Identities = 125/389 (32%), Positives = 185/389 (47%), Gaps = 20/389 (5%)
 Frame = -2

Query: 1355 EKLPSETVSNILSRLPVDSLSQSRSVCKTWYKSIYDPYFVRKHLQLLAAQNKGTSQVLLM 1176
            EKLP E   +ILSR P+ SL + + V + WY S+ +P     HL   A QN     +L  
Sbjct: 20   EKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAAEQNLC---LLFF 76

Query: 1175 KKHENSDCEFHYVEYDDENRYKIIKLNYPPIQCNCKYRAIVGSCNGLICISEHVNNDPIY 996
                 S  E   VE+ +  + K +K  +  +    +   +VGSCNGLIC+ ++ ++DP+Y
Sbjct: 77   SDWPRSKLELVQVEHPEPRKLKTLKTPFESVLSEFE---VVGSCNGLICLYDYFSDDPLY 133

Query: 995  VCNPMTSECIHLPKLSDIPTHSDNRSLSLVVVRGFGYNPSTDEYKVVRILFNQPNRKSFE 816
            + NP T EC  LP++   P      S+   VV GFG++P  +EYKV++I++ +     F 
Sbjct: 134  IYNPFTIECRELPRVEASP-----HSVICRVVFGFGFHPKMEEYKVIKIVYYKQGNNDFS 188

Query: 815  GQV-QVYTLGKDT-EWRRKGAAPYFLRWQLSGVLVNGALHWITEIVDVFNKDYCNKIVAF 642
            G   + + L  +T  WR  G   Y L    S  LVN  LHW+T  + V  +    +IV+F
Sbjct: 189  GGAPEAFVLTANTPTWRNIGKIGYDLNGPTSEALVNEKLHWLTFCL-VHEEVKYREIVSF 247

Query: 641  NLANEEFQVVPPAPCFLSGKNNYDLVELGGNLCVTEYLFYGHINIWMIKDYIGKDSAWTK 462
            +L  E+FQ VP   C    + NY LV L G L        G   IWM+K Y  K ++W K
Sbjct: 248  DLETEQFQDVPRPGCGGLDQINYHLVTLRGCLSAIVSCNEGSNEIWMMKIYNVK-ASWRK 306

Query: 461  EYTIGN------------------EGQSNHLYKAFALTKDGEVLLWRNGVILVSYDPKTG 336
            E  + N                   G     ++     K+GE+LL      +VSY+P+TG
Sbjct: 307  EMIVRNYVPQGLRLNTVPPARRRKNGYQGRRFRVLCDLKNGELLLLYGCRCIVSYNPETG 366

Query: 335  TLTNIEDHGKVKRLEAVPHVKSLVSLKAI 249
                +   G      A  H  SL+S+  +
Sbjct: 367  EFKELNFQGLPLEFLAFVHSGSLISVNTV 395


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  181 bits (459), Expect = 5e-43
 Identities = 130/394 (32%), Positives = 190/394 (48%), Gaps = 30/394 (7%)
 Frame = -2

Query: 1358 MEKLPSETVSNILSRLPVDSLSQSRSVCKTWYKSIYDPYFVRKHLQLLAAQNKGTSQVLL 1179
            ME+LP + + +ILSRLPV SL Q R VC+ W     D     KHL   A  N      L+
Sbjct: 27   MERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNP----CLI 82

Query: 1178 MKKHENSDCEFHYVEYDDENRYK-IIKLNYPPIQCNCKYRAIVGSCNGLICISEHVNNDP 1002
            +        +  +V+   E+R K +++    P   +     +VGSCNGL+C+++ +  D 
Sbjct: 83   LHCDYPIRNQISFVDISAESRDKDMVRKLTIPFWASMPEFEVVGSCNGLLCLADSLFKDA 142

Query: 1001 IYVCNPMTSECIHLPKLSDIPTHSDNRSLSLVVVRGFGYNPSTDEYKVVRILFNQPNRKS 822
            +YV NP T +   LPK    P           VV GFGY+P T+ YKVV++++ +     
Sbjct: 143  VYVHNPFTRDFKQLPKSLQYPDQE--------VVFGFGYHPMTEVYKVVKVVYYRNGYGG 194

Query: 821  F---------EGQVQVYTLGKDTEWRRKGAAPYFL-RWQLSGVLVNGALHWITEIVDVFN 672
            F         + +VQV TLG  T WR  G   Y L RW  S  LVNG LHW+T       
Sbjct: 195  FSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSYQLDRWP-SEALVNGRLHWVTR-----P 247

Query: 671  KDYCNK-IVAFNLANEEFQVVPPAPCFLSGKNNYDLVELGGNLCVTEYLFYGHINIWMIK 495
            + Y  + IV+F+LA+E+F+ +P   C    + NY L+ LGG L    +   G + +W++K
Sbjct: 248  RRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSAAVHRSNGKLEVWVMK 307

Query: 494  DYIGKDSAWTKEYTIG------------------NEGQSNHLYKAFALTKDGEVLLWRNG 369
            +Y  K+S W KE+ IG                           +   L K+GE+LL   G
Sbjct: 308  EYDVKES-WIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCLLKNGEILLEYKG 366

Query: 368  VILVSYDPKTGTLTNIEDHGKVKRLEAVPHVKSL 267
             +LVSY+P+ G   ++   G     +   HV SL
Sbjct: 367  RVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSL 400


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
            gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
            protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
            unknown protein [Arabidopsis thaliana]
            gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
            [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
            At3g07870 [Arabidopsis thaliana]
            gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
            thaliana]
          Length = 417

 Score =  174 bits (442), Expect = 5e-41
 Identities = 118/404 (29%), Positives = 196/404 (48%), Gaps = 40/404 (9%)
 Frame = -2

Query: 1358 MEKLPSETVSNILSRLPVDSLSQSRSVCKTWYKSIYDPYFVRKHLQLLAAQNKGTSQVLL 1179
            +E LP + +++I SRLP+ S+++   VC++W +S+     + +H +L ++ +  T   LL
Sbjct: 25   LESLPEDIIADIFSRLPISSIARLMFVCRSW-RSV-----LTQHGRLSSSSSSPTKPCLL 78

Query: 1178 MKKHENSDCEFHYVEYDDENRYKIIKLNYPPIQCNCKYRAIVGSCNGLICISEHVNNDPI 999
            +          H+++  +E +    K        +     +VGSCNGL+C+S+ + ND +
Sbjct: 79   LHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSL 138

Query: 998  YVCNPMTSECIHLPKLSDIPTHSDNRSLSLVVVRGFGYNPSTDEYKVVRILFNQPNRKSF 819
            Y+ NP T+  + LP+ S       N+     +V GFG++  T EYKV++I++ + +  + 
Sbjct: 139  YLYNPFTTNSLELPECS-------NKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNN 191

Query: 818  EG-------------QVQVYTLGKDT-----EWRRKGAAPYFLRWQLSGVLVNGALHWIT 693
             G             +VQ+ TL   T      WR  G APY    + S  LVNG LH++T
Sbjct: 192  NGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVT 251

Query: 692  E----IVDVFNKDYCNKIVAFNLANEEFQVVPPAPCFLSGKNNYDLVELGGNLCVTEYLF 525
                 + D        K V+F+L +EEF+ +P   C    + N+ LV L G LC   Y  
Sbjct: 252  RPRRHVPD-------RKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVVYGN 304

Query: 524  YGHINIWMIKDYIGKDSAWTKEYTIG------------------NEGQSNHLYKAFALTK 399
            YG ++IW++K Y G   +W KEY+IG                     ++  + +   L +
Sbjct: 305  YGKLDIWVMKTY-GVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLE 363

Query: 398  DGEVLLWRNGVILVSYDPKTGTLTNIEDHGKVKRLEAVPHVKSL 267
            +GE+LL     +LV+YDPK G   ++  HG       V H  +L
Sbjct: 364  NGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTL 407