BLASTX nr result

ID: Cimicifuga21_contig00015879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015879
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237069.1| uncharacterized protein LOC100305814 [Glycin...   177   4e-42
gb|ABW81107.1| AcylCoa-1 [Cleome spinosa]                             171   2e-40
ref|XP_003615571.1| Acyl-coenzyme A thioesterase [Medicago trunc...   169   7e-40
ref|XP_002520431.1| acyl-CoA thioesterase, putative [Ricinus com...   167   3e-39
ref|XP_002881059.1| thioesterase family protein [Arabidopsis lyr...   165   2e-38

>ref|NP_001237069.1| uncharacterized protein LOC100305814 [Glycine max]
           gi|255626689|gb|ACU13689.1| unknown [Glycine max]
          Length = 159

 Score =  177 bits (448), Expect = 4e-42
 Identities = 95/169 (56%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
 Frame = +1

Query: 280 SRFNAIPQ-QAGNSQSFYEEFALKGIRVDRVEPGCVVCTFKVPSRLTNATGNMCSGAIAN 456
           SR N++P  +AG++ SFYE F L GIRVDRV+PG V CTFKVPSRL + +G + SG IAN
Sbjct: 19  SRLNSVPSLRAGDNSSFYEHFILSGIRVDRVQPGLVSCTFKVPSRLADRSGKLASGTIAN 78

Query: 457 LIDEVGGAIVHVDGLPMSVSVDMSISYLSTAKVNDELEITSRVLGRKGGYSGTIVLLRNX 636
           L+DEVGGA++H +GLPM+VSVDMSIS+LS+ +V DELEITSR+LGRKGGYSGTIVLL+N 
Sbjct: 79  LVDEVGGAVIHEEGLPMNVSVDMSISFLSSVRVGDELEITSRLLGRKGGYSGTIVLLKN- 137

Query: 637 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGRHSLFGKLASKM 783
                                             AEGRHSLFG+  SKM
Sbjct: 138 ---------------------------KATGELIAEGRHSLFGRHNSKM 159


>gb|ABW81107.1| AcylCoa-1 [Cleome spinosa]
          Length = 155

 Score =  171 bits (434), Expect = 2e-40
 Identities = 90/160 (56%), Positives = 110/160 (68%)
 Frame = +1

Query: 304 QAGNSQSFYEEFALKGIRVDRVEPGCVVCTFKVPSRLTNATGNMCSGAIANLIDEVGGAI 483
           + G  +SFYE+F+L+GIRVDRVEPG V CT KVP RLT+  GNM +GAIANL+DEVGGA+
Sbjct: 24  RVGKGRSFYEDFSLRGIRVDRVEPGFVSCTLKVPPRLTDRNGNMATGAIANLVDEVGGAV 83

Query: 484 VHVDGLPMSVSVDMSISYLSTAKVNDELEITSRVLGRKGGYSGTIVLLRNXXXXXXXXXX 663
           VHV+GLPM+VSVDMSIS+LS+AK+ DELEITS+VLG +GGY GTIV++RN          
Sbjct: 84  VHVEGLPMNVSVDMSISFLSSAKLGDELEITSKVLGERGGYKGTIVVVRN---------- 133

Query: 664 XXXXXXXXXXXXXXXXXXXXXXXXXAEGRHSLFGKLASKM 783
                                    AEGRHSLFG+  SK+
Sbjct: 134 ------------------KLTGEIIAEGRHSLFGRKPSKI 155


>ref|XP_003615571.1| Acyl-coenzyme A thioesterase [Medicago truncatula]
           gi|355516906|gb|AES98529.1| Acyl-coenzyme A thioesterase
           [Medicago truncatula] gi|388513043|gb|AFK44583.1|
           unknown [Medicago truncatula]
          Length = 161

 Score =  169 bits (429), Expect = 7e-40
 Identities = 96/189 (50%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
 Frame = +1

Query: 220 MEKARXXXXXXXXXXXXXXXSRFNAIPQ-QAGNSQSFYEEFALKGIRVDRVEPGCVVCTF 396
           MEK +               SR  ++P  +AG++ SFYE F L GI+V++V+PG + C+F
Sbjct: 1   MEKTKEILQRKLSQQETEALSRLQSVPAIRAGDNSSFYEHFILTGIKVEQVQPGFISCSF 60

Query: 397 KVPSRLTNATGNMCSGAIANLIDEVGGAIVHVDGLPMSVSVDMSISYLSTAKVNDELEIT 576
            VP RLT++TG M +GAIA L+DEVGGA+VH +GLPM+VSVDMSIS+LSTA VNDELEIT
Sbjct: 61  IVPPRLTDSTGKMGNGAIATLVDEVGGALVHQEGLPMNVSVDMSISFLSTAHVNDELEIT 120

Query: 577 SRVLGRKGGYSGTIVLLRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGRHS 756
           SR+LGRKGGYSGTIVLL+N                                   AEGRHS
Sbjct: 121 SRLLGRKGGYSGTIVLLKN----------------------------KATGESIAEGRHS 152

Query: 757 LFGKLASKM 783
           LFG+  SKM
Sbjct: 153 LFGRHNSKM 161


>ref|XP_002520431.1| acyl-CoA thioesterase, putative [Ricinus communis]
           gi|223540273|gb|EEF41844.1| acyl-CoA thioesterase,
           putative [Ricinus communis]
          Length = 159

 Score =  167 bits (424), Expect = 3e-39
 Identities = 90/168 (53%), Positives = 111/168 (66%)
 Frame = +1

Query: 280 SRFNAIPQQAGNSQSFYEEFALKGIRVDRVEPGCVVCTFKVPSRLTNATGNMCSGAIANL 459
           S+    P + G   SFYE+F L+GIRVDRVEPG V CTFKVP RLT+ +G + +GAIANL
Sbjct: 20  SKLTYQPHRVGLDPSFYEDFVLRGIRVDRVEPGFVSCTFKVPPRLTDRSGKLATGAIANL 79

Query: 460 IDEVGGAIVHVDGLPMSVSVDMSISYLSTAKVNDELEITSRVLGRKGGYSGTIVLLRNXX 639
           +DEVGGA+V V+GLPM+VSVDMSIS+LS+A ++DELEIT +VLGRKGGY+GT VL++N  
Sbjct: 80  VDEVGGAVVFVEGLPMNVSVDMSISFLSSANLHDELEITGKVLGRKGGYAGTTVLVKN-- 137

Query: 640 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGRHSLFGKLASKM 783
                                            AEGRHSLFGK  SK+
Sbjct: 138 --------------------------KATGELIAEGRHSLFGKHTSKI 159


>ref|XP_002881059.1| thioesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326898|gb|EFH57318.1| thioesterase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score =  165 bits (417), Expect = 2e-38
 Identities = 86/158 (54%), Positives = 108/158 (68%)
 Frame = +1

Query: 310 GNSQSFYEEFALKGIRVDRVEPGCVVCTFKVPSRLTNATGNMCSGAIANLIDEVGGAIVH 489
           G  +SFYE+F+L+GIRV RVEPG + C FKVP RLT+  GN+ +GAIANL+DEVGGA+VH
Sbjct: 23  GKGKSFYEDFSLRGIRVSRVEPGFISCYFKVPLRLTDREGNLANGAIANLVDEVGGALVH 82

Query: 490 VDGLPMSVSVDMSISYLSTAKVNDELEITSRVLGRKGGYSGTIVLLRNXXXXXXXXXXXX 669
           V+GLPMSVSVDMSI++LS AK+ +ELEITSR+LG +GGY GTIV++RN            
Sbjct: 83  VEGLPMSVSVDMSIAFLSKAKLGEELEITSRLLGERGGYKGTIVVVRN------------ 130

Query: 670 XXXXXXXXXXXXXXXXXXXXXXXAEGRHSLFGKLASKM 783
                                  AEGRHS+FG+ ASK+
Sbjct: 131 ----------------KMTGEIIAEGRHSMFGRQASKL 152


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