BLASTX nr result

ID: Cimicifuga21_contig00015778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015778
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178534.2| protein-tyrosine-phosphatase IBR5 [Arabidopsis ...    60   4e-07
ref|XP_002883647.1| indole-3-butyric acid response 5 [Arabidopsi...    57   4e-06
ref|XP_003616830.1| Protein-tyrosine-phosphatase IBR5 [Medicago ...    56   9e-06

>ref|NP_178534.2| protein-tyrosine-phosphatase IBR5 [Arabidopsis thaliana]
           gi|75297689|sp|Q84JU4.1|IBR5_ARATH RecName:
           Full=Protein-tyrosine-phosphatase IBR5; AltName:
           Full=Protein INDOLE-3-BUTYRIC ACID RESPONSE 5;
           Short=Protein IBA RESPONSE 5; AltName:
           Full=SKP1-interacting partner 33
           gi|28393745|gb|AAO42283.1| putative protein phosphatase
           [Arabidopsis thaliana] gi|28973409|gb|AAO64029.1|
           putative protein phosphatase [Arabidopsis thaliana]
           gi|37813554|gb|AAR04550.1| dual-specificity
           phosphatase-like protein [Arabidopsis thaliana]
           gi|330250751|gb|AEC05845.1| protein-tyrosine-phosphatase
           IBR5 [Arabidopsis thaliana]
          Length = 257

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 36/83 (43%), Positives = 48/83 (57%)
 Frame = -1

Query: 726 WVKERRPSTDLSPDFSQQLQEYEQKIFGSVESNPLPQVNLVTNPVPAFGNLTLDDHAALN 547
           WVK+RRPSTD+SP+F QQLQE+EQ IFG   S  +  +N+   P   FG   +D+ A   
Sbjct: 158 WVKQRRPSTDISPEFYQQLQEFEQGIFG---SEMMSAMNINDAPTFGFGFPKIDNQA--Q 212

Query: 546 IPTFGSGWNNQIPNHSLGPTPAN 478
            P F     N  P  S+  +PA+
Sbjct: 213 APVF-----NNAPTSSIFSSPAS 230


>ref|XP_002883647.1| indole-3-butyric acid response 5 [Arabidopsis lyrata subsp. lyrata]
           gi|297329487|gb|EFH59906.1| indole-3-butyric acid
           response 5 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 34/83 (40%), Positives = 47/83 (56%)
 Frame = -1

Query: 726 WVKERRPSTDLSPDFSQQLQEYEQKIFGSVESNPLPQVNLVTNPVPAFGNLTLDDHAALN 547
           WVK+RR +TD+SP+F QQLQE+EQ IFG   S  +  +N+   P   FG   +D+ A   
Sbjct: 158 WVKQRRTTTDISPEFYQQLQEFEQSIFG---SGMMSAMNINDAPTFGFGFPKIDNQA--Q 212

Query: 546 IPTFGSGWNNQIPNHSLGPTPAN 478
            P F     N  P  S+  +PA+
Sbjct: 213 APVF-----NNAPTSSIFSSPAS 230


>ref|XP_003616830.1| Protein-tyrosine-phosphatase IBR5 [Medicago truncatula]
           gi|355518165|gb|AES99788.1| Protein-tyrosine-phosphatase
           IBR5 [Medicago truncatula]
          Length = 270

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 45/117 (38%), Positives = 56/117 (47%), Gaps = 27/117 (23%)
 Frame = -1

Query: 726 WVKERRPSTDLSPDFSQQLQEYEQKIFGSVESN-----------------PLPQVNLVTN 598
           WVKERRP+ +LS    QQLQEYE+K+FGSV S+                   P+ N +  
Sbjct: 155 WVKERRPAVELSEGAHQQLQEYEKKLFGSVGSSLQLPVVFSPAAGPHLSFGFPKTNDIA- 213

Query: 597 PVPAFGNLTL--------DDHAALNIPTFGSGWNNQIPNHSLGPTPANWN--DAQME 457
           P+PAFG  T          D A  N  TFG+G  N   N      P+N N  D QM+
Sbjct: 214 PLPAFGCTTTPSIFSRAPSDIAPTNF-TFGAG-QNVTGNSPFNTNPSNPNVTDIQMD 268


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