BLASTX nr result

ID: Cimicifuga21_contig00015731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015731
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154884.1| PREDICTED: double-strand break repair protei...   229   2e-58
ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-stran...   229   2e-58
ref|XP_002525759.1| meiotic recombination repair protein, putati...   227   7e-58
ref|XP_002281726.1| PREDICTED: double-strand break repair protei...   226   1e-57
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56

>ref|XP_004154884.1| PREDICTED: double-strand break repair protein MRE11-like [Cucumis
           sativus]
          Length = 739

 Score =  229 bits (584), Expect = 2e-58
 Identities = 107/116 (92%), Positives = 113/116 (97%)
 Frame = -2

Query: 350 LNDRPVQFEVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAIDIL 171
           LND+PVQF+VVSDQT+NF N FGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSA+DIL
Sbjct: 84  LNDKPVQFQVVSDQTINFPNTFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDIL 143

Query: 170 SACNLVNYFGKMGLGGSGVGQITVCPILIRKGSTSIALYGLGNIRDERLNRMFQTP 3
           SACNLVNYFGKM LGGSGVGQIT+CPILIRKGSTS+ALYGLGNIRDERLNRMFQTP
Sbjct: 144 SACNLVNYFGKMVLGGSGVGQITLCPILIRKGSTSVALYGLGNIRDERLNRMFQTP 199


>ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-strand break repair protein
           MRE11-like [Cucumis sativus]
          Length = 747

 Score =  229 bits (584), Expect = 2e-58
 Identities = 107/116 (92%), Positives = 113/116 (97%)
 Frame = -2

Query: 350 LNDRPVQFEVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAIDIL 171
           LND+PVQF+VVSDQT+NF N FGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSA+DIL
Sbjct: 93  LNDKPVQFQVVSDQTINFPNTFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDIL 152

Query: 170 SACNLVNYFGKMGLGGSGVGQITVCPILIRKGSTSIALYGLGNIRDERLNRMFQTP 3
           SACNLVNYFGKM LGGSGVGQIT+CPILIRKGSTS+ALYGLGNIRDERLNRMFQTP
Sbjct: 153 SACNLVNYFGKMVLGGSGVGQITLCPILIRKGSTSVALYGLGNIRDERLNRMFQTP 208


>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
           gi|223534909|gb|EEF36595.1| meiotic recombination repair
           protein, putative [Ricinus communis]
          Length = 765

 Score =  227 bits (579), Expect = 7e-58
 Identities = 107/116 (92%), Positives = 113/116 (97%)
 Frame = -2

Query: 350 LNDRPVQFEVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAIDIL 171
           LNDRPVQF+VVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSA+DIL
Sbjct: 84  LNDRPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDIL 143

Query: 170 SACNLVNYFGKMGLGGSGVGQITVCPILIRKGSTSIALYGLGNIRDERLNRMFQTP 3
           SACNLVNYFGKM L GSGVGQIT+ PIL+RKGST++ALYGLGNIRDERLNRMFQTP
Sbjct: 144 SACNLVNYFGKMALEGSGVGQITLYPILVRKGSTAVALYGLGNIRDERLNRMFQTP 199


>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis
           vinifera] gi|302143084|emb|CBI20379.3| unnamed protein
           product [Vitis vinifera]
          Length = 731

 Score =  226 bits (577), Expect = 1e-57
 Identities = 109/116 (93%), Positives = 112/116 (96%)
 Frame = -2

Query: 350 LNDRPVQFEVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAIDIL 171
           LNDRPVQFEVVSDQTVNFAN FGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSA+DIL
Sbjct: 84  LNDRPVQFEVVSDQTVNFANIFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDIL 143

Query: 170 SACNLVNYFGKMGLGGSGVGQITVCPILIRKGSTSIALYGLGNIRDERLNRMFQTP 3
           SACNLVNYFGKM LGGSGVGQIT+ PILIRKGST +ALYGLGNIRDERLNRMFQTP
Sbjct: 144 SACNLVNYFGKMVLGGSGVGQITLYPILIRKGSTLVALYGLGNIRDERLNRMFQTP 199


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score =  223 bits (567), Expect = 2e-56
 Identities = 105/116 (90%), Positives = 112/116 (96%)
 Frame = -2

Query: 350 LNDRPVQFEVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAIDIL 171
           LND+PVQF+VVSDQTVNFAN FGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSA+DIL
Sbjct: 84  LNDQPVQFQVVSDQTVNFANVFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDIL 143

Query: 170 SACNLVNYFGKMGLGGSGVGQITVCPILIRKGSTSIALYGLGNIRDERLNRMFQTP 3
           SACNLVNYFGKM L GSGVGQIT+ PIL+RKGST++ALYGLGNIRDERLNRMFQTP
Sbjct: 144 SACNLVNYFGKMALEGSGVGQITLYPILVRKGSTAVALYGLGNIRDERLNRMFQTP 199


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