BLASTX nr result
ID: Cimicifuga21_contig00015698
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00015698 (1143 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR18062.1| unknown [Picea sitchensis] 267 3e-69 ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 266 7e-69 ref|XP_002318990.1| predicted protein [Populus trichocarpa] gi|2... 261 2e-67 emb|CBI39508.3| unnamed protein product [Vitis vinifera] 261 2e-67 ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 261 2e-67 >gb|ABR18062.1| unknown [Picea sitchensis] Length = 331 Score = 267 bits (683), Expect = 3e-69 Identities = 130/176 (73%), Positives = 142/176 (80%) Frame = -1 Query: 1143 VEDLFYKYGPLVDIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYNFDGHRLRVELAHG 964 VEDLFYKYGP+VDIDLK+PPRPPGY F+EFEDA+DAEDAIRGRDGYNFDG+RLRVELAHG Sbjct: 23 VEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGNRLRVELAHG 82 Query: 963 GRGQMSSTDXXXXXXXXXXXXXXXXXXXXXXXXXXRHSDYRVLVTGLPQSASWQDLKDHM 784 GRGQ S+ D S+YRVLV+GLP SASWQDLKDHM Sbjct: 83 GRGQSSTNDRYSSYSSAGGRSGGVSR----------RSEYRVLVSGLPSSASWQDLKDHM 132 Query: 783 RRAGDVCFSQVFRDASGTTGIVDYTNYDDMKYAVKKLDDSEFRNAFTRSYIRVKVY 616 RRAGDVCFSQVFRD+SGTTGIVDYTNYDDMKYA++KLDDSEFRNAF+R YIRVK Y Sbjct: 133 RRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEY 188 >ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus] gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus] Length = 309 Score = 266 bits (680), Expect = 7e-69 Identities = 131/177 (74%), Positives = 140/177 (79%) Frame = -1 Query: 1143 VEDLFYKYGPLVDIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYNFDGHRLRVELAHG 964 VEDLFYKYG + IDLKVPPRPPGYAFVEFEDA+DA+DAIRGRDGY+FDGHRLRVELAHG Sbjct: 23 VEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHG 82 Query: 963 GRGQMSSTDXXXXXXXXXXXXXXXXXXXXXXXXXXRHSDYRVLVTGLPQSASWQDLKDHM 784 GRG SS D SDYRVLVTGLP SASWQDLKDHM Sbjct: 83 GRGHSSSNDRYSSHGGSRGGRGVSR-----------RSDYRVLVTGLPSSASWQDLKDHM 131 Query: 783 RRAGDVCFSQVFRDASGTTGIVDYTNYDDMKYAVKKLDDSEFRNAFTRSYIRVKVYD 613 RRAGDVCFSQVFRD SGTTGIVDYTNYDDMKYA+KKLDDSEFRNAF+R+Y+RV+ YD Sbjct: 132 RRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYVRVREYD 188 >ref|XP_002318990.1| predicted protein [Populus trichocarpa] gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa] Length = 224 Score = 261 bits (668), Expect = 2e-67 Identities = 130/177 (73%), Positives = 138/177 (77%) Frame = -1 Query: 1143 VEDLFYKYGPLVDIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYNFDGHRLRVELAHG 964 VEDLFYKYGP+VDIDLK+PPRPPGYAFVEFE+A+DAEDAIRGRDGYNFDG RLRVELAHG Sbjct: 22 VEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYNFDGCRLRVELAHG 81 Query: 963 GRGQMSSTDXXXXXXXXXXXXXXXXXXXXXXXXXXRHSDYRVLVTGLPQSASWQDLKDHM 784 GR S D SDYRVLVTGLP SASWQDLKDHM Sbjct: 82 GRRHSSPVDHYSSYSGSSGSRGPSK-----------RSDYRVLVTGLPSSASWQDLKDHM 130 Query: 783 RRAGDVCFSQVFRDASGTTGIVDYTNYDDMKYAVKKLDDSEFRNAFTRSYIRVKVYD 613 RRAGDVCFSQVFRD G TGIVDYTNYDDMKYA+KKLDDSEFRNAF+R+YIRV+ YD Sbjct: 131 RRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYIRVREYD 187 >emb|CBI39508.3| unnamed protein product [Vitis vinifera] Length = 249 Score = 261 bits (667), Expect = 2e-67 Identities = 128/177 (72%), Positives = 139/177 (78%) Frame = -1 Query: 1143 VEDLFYKYGPLVDIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYNFDGHRLRVELAHG 964 VEDLFYKYGP+VDIDLK+PPRPPGYAFVEFEDA+DAEDAI GRDGYNFDGHRLRVELAHG Sbjct: 23 VEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHG 82 Query: 963 GRGQMSSTDXXXXXXXXXXXXXXXXXXXXXXXXXXRHSDYRVLVTGLPQSASWQDLKDHM 784 GRGQ SS D HS+YRVLVTGLP SASWQDLKDHM Sbjct: 83 GRGQSSSVDHYSSYSSSSRGGLSR------------HSEYRVLVTGLPYSASWQDLKDHM 130 Query: 783 RRAGDVCFSQVFRDASGTTGIVDYTNYDDMKYAVKKLDDSEFRNAFTRSYIRVKVYD 613 RRAGDVCFSQVFR G TGIVDYTNYDDMKYA++KLDDS F+N F+R+YIRV+ Y+ Sbjct: 131 RRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYE 187 >ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera] Length = 288 Score = 261 bits (667), Expect = 2e-67 Identities = 128/177 (72%), Positives = 139/177 (78%) Frame = -1 Query: 1143 VEDLFYKYGPLVDIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYNFDGHRLRVELAHG 964 VEDLFYKYGP+VDIDLK+PPRPPGYAFVEFEDA+DAEDAI GRDGYNFDGHRLRVELAHG Sbjct: 23 VEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAHG 82 Query: 963 GRGQMSSTDXXXXXXXXXXXXXXXXXXXXXXXXXXRHSDYRVLVTGLPQSASWQDLKDHM 784 GRGQ SS D HS+YRVLVTGLP SASWQDLKDHM Sbjct: 83 GRGQSSSVDHYSSYSSSSRGGLSR------------HSEYRVLVTGLPYSASWQDLKDHM 130 Query: 783 RRAGDVCFSQVFRDASGTTGIVDYTNYDDMKYAVKKLDDSEFRNAFTRSYIRVKVYD 613 RRAGDVCFSQVFR G TGIVDYTNYDDMKYA++KLDDS F+N F+R+YIRV+ Y+ Sbjct: 131 RRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSLFKNQFSRAYIRVREYE 187