BLASTX nr result

ID: Cimicifuga21_contig00015693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015693
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263...   363   4e-98
ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|2...   328   1e-87
gb|AFK36557.1| unknown [Medicago truncatula]                          322   7e-86
ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei...   322   1e-85
ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783...   321   2e-85

>ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
           gi|297743102|emb|CBI35969.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  363 bits (932), Expect = 4e-98
 Identities = 184/270 (68%), Positives = 207/270 (76%), Gaps = 3/270 (1%)
 Frame = -1

Query: 850 HQPYDPSYLYPQNDQQNINTLFVSGLPDDIKPREIHNLFRRRHGFDFCQLKYTGRGNQVV 671
           H  YDP Y + Q D+  INTLFVSGLPDD+KPREIHNLFRRR GFD CQLKYTGRGNQVV
Sbjct: 3   HHAYDPYYHHAQGDRSGINTLFVSGLPDDVKPREIHNLFRRRPGFDSCQLKYTGRGNQVV 62

Query: 670 AFATFFNHQAAIAVLNTLNGSTFDPRTGASLHIELARSNSRPKRLHAGAGAYYVIDKRKK 491
           AFATFFNHQ A+A L+ LNG  FDP+TG+ LHIELARSNSR KR+  G+GAY VIDKR K
Sbjct: 63  AFATFFNHQTAVAALHALNGVKFDPQTGSILHIELARSNSRRKRV-PGSGAYVVIDKRSK 121

Query: 490 VSDDAHETSSNDGDDGSDEPSGTENPHSSNKGNFASGESAEKAVDHGS---KDNELSEKA 320
            S +AHETSS+DGD  SDEP+ T NP S N  +  + +S E AVD  S     NE  EK 
Sbjct: 122 TSTNAHETSSDDGDSESDEPAKTSNPDSGNNDDLVTAKSGEMAVDPDSTLTAVNEQPEKT 181

Query: 319 VGGDRPPCSTLFIANLGPNCTDEELKAALSKYPGFHIVKMRANRGMPVAFADFEGADQAT 140
                PPCSTLFIANLGP CT++ELK  LS+YPGF+++KMRA  GMPVAFADFE  +QA 
Sbjct: 182 TDAGLPPCSTLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAKGGMPVAFADFEEIEQAN 241

Query: 139 EAMQGLQGSELPSSDRGGMHLEYARSKMRK 50
           +AM  LQGS L SSDRGGMHLEYARSKMRK
Sbjct: 242 KAMDALQGSMLASSDRGGMHLEYARSKMRK 271


>ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|222836088|gb|EEE74509.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  328 bits (841), Expect = 1e-87
 Identities = 170/276 (61%), Positives = 202/276 (73%), Gaps = 9/276 (3%)
 Frame = -1

Query: 850 HQPYDPSYLYPQND-------QQNINTLFVSGLPDDIKPREIHNLFRRRHGFDFCQLKYT 692
           HQPYDP Y  P             INTLFVSGLPDD+K REIHN+FRRR GFD CQLKYT
Sbjct: 6   HQPYDPYYQLPPAAAAPGGEWNSGINTLFVSGLPDDVKAREIHNIFRRRPGFDSCQLKYT 65

Query: 691 GRGNQVVAFATFFNHQAAIAVLNTLNGSTFDPRTGASLHIELARSNSRPKRLHAGAGAYY 512
           GRGNQVVAFATFFNHQ+AIA L++LNG  FDP++G++LHIELARSNSR KR   G+GAY 
Sbjct: 66  GRGNQVVAFATFFNHQSAIAALHSLNGVKFDPQSGSTLHIELARSNSRRKR-KPGSGAYV 124

Query: 511 VIDKRKKVSDDAHETSSNDGDDGSDEPSGTENPHSSNKGNF--ASGESAEKAVDHGSKDN 338
           VIDKR K   DAHETSS+D +   +E     N  ++ +G+   A  E+A    +     N
Sbjct: 125 VIDKRTKKPSDAHETSSDDVESDPEEDPEMNNVDTAYQGDSENAKSEAASDPDNAAVAVN 184

Query: 337 ELSEKAVGGDRPPCSTLFIANLGPNCTDEELKAALSKYPGFHIVKMRANRGMPVAFADFE 158
           E+ E+   G   PCSTLFIANLGPNCT++ELK  LS+YPGFH++K+RA  GMPVAFADFE
Sbjct: 185 EIGERTAEGGVRPCSTLFIANLGPNCTEDELKQVLSQYPGFHVLKIRAKGGMPVAFADFE 244

Query: 157 GADQATEAMQGLQGSELPSSDRGGMHLEYARSKMRK 50
             +QAT+ M+ LQ + LPSSDRGGMH+EYARSKMRK
Sbjct: 245 EIEQATKVMENLQETTLPSSDRGGMHIEYARSKMRK 280


>gb|AFK36557.1| unknown [Medicago truncatula]
          Length = 268

 Score =  322 bits (826), Expect = 7e-86
 Identities = 170/270 (62%), Positives = 202/270 (74%), Gaps = 4/270 (1%)
 Frame = -1

Query: 847 QPYDPSYLYPQNDQQNINTLFVSGLPDDIKPREIHNLFRRRHGFDFCQLKYTGRGNQVVA 668
           Q +D  Y Y Q+++ NINTLFVSGLPDD+K REIHNLFRRR GFD CQLKYTGR NQVVA
Sbjct: 4   QQFDQYYHYQQDERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVA 63

Query: 667 FATFFNHQAAIAVLNTLNGSTFDPRTGASLHIELARSNSRPKRLHAGAGAYYVIDKRKKV 488
           FATFFNHQAA+  L++LNG  FDP++G+ LHIELARSNSR KR   G GAY VIDKR K 
Sbjct: 64  FATFFNHQAAMQALHSLNGVKFDPQSGSVLHIELARSNSRRKR-KPGGGAYVVIDKRSKG 122

Query: 487 SDDAHETSSNDGDDGSDEPSGTENPHSSNKGNFASGESAEKAVDHGSKDNELSEKAV--- 317
             +   +SS+DG+   DEPS     + SN G+ A+ +S +  V  GS ++    +A    
Sbjct: 123 EANVQGSSSDDGESDPDEPS----ENGSNHGDIATAQSGDAVV--GSDNHVPVARAQHGK 176

Query: 316 -GGDRPPCSTLFIANLGPNCTDEELKAALSKYPGFHIVKMRANRGMPVAFADFEGADQAT 140
            GGD  PCSTLFIANLGPNCT++ELK ALS Y GF++VKMR+  GMPVAFADFE  DQA 
Sbjct: 177 GGGDGGPCSTLFIANLGPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADFEEIDQAV 236

Query: 139 EAMQGLQGSELPSSDRGGMHLEYARSKMRK 50
           + M+ LQGS LPSSDRGGMH+EYARS+MRK
Sbjct: 237 KVMEELQGSSLPSSDRGGMHIEYARSRMRK 266


>ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
           sativus]
          Length = 262

 Score =  322 bits (825), Expect = 1e-85
 Identities = 166/273 (60%), Positives = 196/273 (71%), Gaps = 5/273 (1%)
 Frame = -1

Query: 850 HQPYDPSYLYPQND-----QQNINTLFVSGLPDDIKPREIHNLFRRRHGFDFCQLKYTGR 686
           H PYDP YLY Q D     + NINTLF+SGLPDD+K REIHNLFRRR GFD CQLKYTGR
Sbjct: 3   HLPYDPYYLYNQPDPTYSERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGR 62

Query: 685 GNQVVAFATFFNHQAAIAVLNTLNGSTFDPRTGASLHIELARSNSRPKRLHAGAGAYYVI 506
           GNQVVAFATF+NHQ+A+  L+ LNG  FDP++G+ LHIELARSNSR K    G GAY VI
Sbjct: 63  GNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKH-KPGGGAYVVI 121

Query: 505 DKRKKVSDDAHETSSNDGDDGSDEPSGTENPHSSNKGNFASGESAEKAVDHGSKDNELSE 326
           DKRKK   ++ ETSS+DG    DEPS  +    SN+       +     +H  K+     
Sbjct: 122 DKRKKTDANSQETSSDDGGSEPDEPS--KKAQQSNEAVVTPANAISAPYEHHEKN----- 174

Query: 325 KAVGGDRPPCSTLFIANLGPNCTDEELKAALSKYPGFHIVKMRANRGMPVAFADFEGADQ 146
                D  PCSTLFIANLGPNC ++ELK  L KYPGF+++K+RA  GMPVAFADFE  +Q
Sbjct: 175 -----DGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQ 229

Query: 145 ATEAMQGLQGSELPSSDRGGMHLEYARSKMRKN 47
           A++ M+ LQGS LPSSDRGGMH+EYARSKMRK+
Sbjct: 230 ASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS 262


>ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
          Length = 264

 Score =  321 bits (823), Expect = 2e-85
 Identities = 171/267 (64%), Positives = 195/267 (73%), Gaps = 2/267 (0%)
 Frame = -1

Query: 844 PYDPSYLYPQNDQQNINTLFVSGLPDDIKPREIHNLFRRRHGFDFCQLKYTGRGNQVVAF 665
           P+DP YLY  ++Q NINTLFVSGLPDD+K REIHNLFRRR GFD CQLKYTGR NQVVAF
Sbjct: 5   PFDPFYLYQHDEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAF 64

Query: 664 ATFFNHQAAIAVLNTLNGSTFDPRTGASLHIELARSNSRPKRLHAGAGAYYVIDKRKKVS 485
           ATFFNHQ+A+A L+ LNG  FDP+TG+ LHIELARSNSR KR   G+GAY VIDKR K  
Sbjct: 65  ATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSNSRRKR-KPGSGAYVVIDKRSKGE 123

Query: 484 DDAHETSSNDGDDGSDEPSGTENPHSSNKGNFASGESAEKAVDHGSKDNELS--EKAVGG 311
            D   +SS DGD   DEPS +      N+G+ A   S E AV     DN +S  +   G 
Sbjct: 124 PDLQGSSSEDGDSDPDEPSDS----GDNQGDLAIMTSDETAV---GSDNAVSVEQHGKGS 176

Query: 310 DRPPCSTLFIANLGPNCTDEELKAALSKYPGFHIVKMRANRGMPVAFADFEGADQATEAM 131
               CSTLFIANLGPNCT++ELK A S Y GF++VKMR+  GMPVAF DFE   QA + M
Sbjct: 177 TGGLCSTLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSRGGMPVAFVDFEETHQAAKVM 236

Query: 130 QGLQGSELPSSDRGGMHLEYARSKMRK 50
           + LQGS LPSSDRGGMH+EYARSKMRK
Sbjct: 237 EELQGSLLPSSDRGGMHIEYARSKMRK 263


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