BLASTX nr result
ID: Cimicifuga21_contig00015688
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00015688 (709 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 350 1e-94 ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 311 8e-83 ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi... 285 8e-75 ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2... 279 3e-73 ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 272 4e-71 >ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040, mitochondrial [Vitis vinifera] gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera] Length = 519 Score = 350 bits (899), Expect = 1e-94 Identities = 164/235 (69%), Positives = 196/235 (83%) Frame = +3 Query: 3 KGRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDL 182 KGR+PD++TYT VINGL + GRF+SAVEIW MV +GF PD AC ALV GLC G+VDL Sbjct: 143 KGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDL 202 Query: 183 AYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLN 362 AYELTV M+ R+ S S+YN+LINGFCQAG +DKAQ I SFMRRNGCEPDLVTYN+LLN Sbjct: 203 AYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLN 262 Query: 363 YCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLC 542 YCCD+++LEEAE LM++MER G+ PD YSYN+LLKGLCKANRL+KAY +MV KMEA+GLC Sbjct: 263 YCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLC 322 Query: 543 DAVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTFFGKGRADV 707 D VS+NT+I ALC AS+TKRAY LFEEM GKGI PD+VT+TILI F +G +++ Sbjct: 323 DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNI 377 Score = 124 bits (310), Expect = 2e-26 Identities = 70/223 (31%), Positives = 114/223 (51%) Frame = +3 Query: 6 GRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLA 185 G +PD++TY ++N E A + +M G PD + L+ GLC+ ++D A Sbjct: 249 GCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKA 308 Query: 186 YELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNY 365 Y + V+ M+ + + YN +I C A +A + M G PD+VT+ IL+ Sbjct: 309 YMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKA 368 Query: 366 CCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCD 545 + A+KL++QM +G+ PD Y ++ LCK ++ A+ + +E+ D Sbjct: 369 FLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPD 428 Query: 546 AVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILI 674 VS+N LI LCRAS A +L+E+M G PD VT+ ++I Sbjct: 429 VVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLII 471 Score = 111 bits (277), Expect = 2e-22 Identities = 66/218 (30%), Positives = 104/218 (47%) Frame = +3 Query: 24 ITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYELTVD 203 I Y I L + RF+ A + + M+ +GF + + GLC+ L +L D Sbjct: 45 IDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLED 104 Query: 204 MMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDKIM 383 M + V YN +N C ++D A + M G EPD+VTY I++N C Sbjct: 105 MDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGR 164 Query: 384 LEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSFNT 563 + A ++ M R G +PD + L+ GLC +++ AY L VG M + +N+ Sbjct: 165 FDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNS 224 Query: 564 LIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILIN 677 LI C+A + +A ++ M G PD+VTY +L+N Sbjct: 225 LINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLN 262 Score = 80.1 bits (196), Expect = 4e-13 Identities = 50/187 (26%), Positives = 87/187 (46%) Frame = +3 Query: 18 DVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYELT 197 DV++Y T+I L + A +++ EM +G PD V L+ +G ++A +L Sbjct: 323 DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLL 382 Query: 198 VDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDK 377 M ++ +Y +++ C+ G++ A + M +G PD+V+YN L+N C Sbjct: 383 DQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRA 442 Query: 378 IMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSF 557 + EA L E M G PD ++ ++ GL +L+ A + ME D Sbjct: 443 SRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVS 502 Query: 558 NTLIVAL 578 TL+ A+ Sbjct: 503 ETLVNAI 509 Score = 80.1 bits (196), Expect = 4e-13 Identities = 46/146 (31%), Positives = 74/146 (50%) Frame = +3 Query: 3 KGRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDL 182 KG PDV+T+T +I + G A ++ +M G PD V +V LC+ G++ + Sbjct: 353 KGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGM 412 Query: 183 AYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLN 362 A+ + DM++ + YNALING C+A RV +A + M G PD VT+ +++ Sbjct: 413 AHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIG 472 Query: 363 YCCDKIMLEEAEKLMEQMERIGINPD 440 + L A ++ +QM G D Sbjct: 473 GLIWEKKLSVACRVWDQMMEKGFTLD 498 Score = 68.6 bits (166), Expect = 1e-09 Identities = 52/193 (26%), Positives = 84/193 (43%) Frame = +3 Query: 129 VACGALVFGLCEQGQVDLAYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSF 308 +A A + + G +D A + +M K + + YN I + R D A+ Sbjct: 10 LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69 Query: 309 MRRNGCEPDLVTYNILLNYCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANR 488 M G + TY+ ++ C EKL+E M+R+G PD ++YN L LC N+ Sbjct: 70 MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129 Query: 489 LNKAYFLMVGKMEAQGLCDAVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTI 668 L+ A ++ +E D V++ +I LCRA A ++ M KG PD Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189 Query: 669 LINTFFGKGRADV 707 L+ G+ D+ Sbjct: 190 LVLGLCHDGKVDL 202 >ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 554 Score = 311 bits (797), Expect = 8e-83 Identities = 145/235 (61%), Positives = 184/235 (78%), Gaps = 1/235 (0%) Frame = +3 Query: 6 GRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLA 185 GR PDV+TYT +I+G+ K +F++A++ W +M+H+GF PD ACGA+V GLC+ +VDLA Sbjct: 144 GRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLA 203 Query: 186 YELTVDMMKR-RVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLN 362 YEL +D+MK RV +ST VYNALI+GFC+AGR+DKAQ IKSFMRRNGCEPDLVTYN+ LN Sbjct: 204 YELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLN 263 Query: 363 YCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLC 542 Y CD++ML++A+KL++ MER GI PD YSYNQLLKG+CK N +KAY LM KM +GLC Sbjct: 264 YFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLC 323 Query: 543 DAVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTFFGKGRADV 707 D VS+NT+I A C+ T AY LFEEM KGI PD+VT+TI I F GKG ++ Sbjct: 324 DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNI 378 Score = 122 bits (307), Expect = 5e-26 Identities = 68/223 (30%), Positives = 110/223 (49%) Frame = +3 Query: 6 GRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLA 185 G +PD++TY +N + A ++ M G PD + L+ G+C+ D A Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309 Query: 186 YELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNY 365 Y L + M + + YN +I FC+ G A + M + G PD+VT+ I + Sbjct: 310 YLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKA 369 Query: 366 CCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCD 545 K A+KL++QM +G++PD Y ++ LCK+ ++ A+ + +E D Sbjct: 370 FLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPD 429 Query: 546 AVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILI 674 +SFN LI C+ S A +L+EEM +G PD VTY ++I Sbjct: 430 VISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLII 472 Score = 94.4 bits (233), Expect = 2e-17 Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 1/221 (0%) Frame = +3 Query: 24 ITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYELTVD 203 I Y I L RF+ A + +M RGF + GLC+ EL D Sbjct: 45 IDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHD 104 Query: 204 MMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDKIM 383 M + +N ++ GR+D A + + +NG +PD+VTY I+++ C Sbjct: 105 METLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKK 164 Query: 384 LEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGL-CDAVSFN 560 + A + M G +PD+ + ++ GLC +++ AY L++ M++ + + +N Sbjct: 165 FDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYN 224 Query: 561 TLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTF 683 LI CRA +A + M G PD+VTY + +N F Sbjct: 225 ALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYF 265 Score = 86.7 bits (213), Expect = 4e-15 Identities = 51/184 (27%), Positives = 88/184 (47%) Frame = +3 Query: 18 DVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYELT 197 DV++Y T+I K G SA +++ EM +G PD V + +G ++A +L Sbjct: 324 DVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLL 383 Query: 198 VDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDK 377 M + + Y +I+ C++G+V+ A I M G PD++++N L+N C Sbjct: 384 DQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKC 443 Query: 378 IMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSF 557 + EA L E+M+ G PD +Y ++ GL + +++ A + M+ D Sbjct: 444 SRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIA 503 Query: 558 NTLI 569 TLI Sbjct: 504 QTLI 507 Score = 86.3 bits (212), Expect = 6e-15 Identities = 47/156 (30%), Positives = 79/156 (50%) Frame = +3 Query: 3 KGRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDL 182 KG PDV+T+T I G F A ++ +M G PD + ++ LC+ G+V++ Sbjct: 354 KGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEM 413 Query: 183 AYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLN 362 A+ + DM+++ + +NALINGFC+ RV +A + M+ G PD VTY +++ Sbjct: 414 AHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIG 473 Query: 363 YCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKG 470 ++ + A + QM G D L++G Sbjct: 474 GLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509 Score = 64.3 bits (155), Expect = 2e-08 Identities = 40/147 (27%), Positives = 67/147 (45%) Frame = +3 Query: 237 VYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDKIMLEEAEKLMEQM 416 +Y + I G+ +AG +DKA + M ++ C + YN + + + A QM Sbjct: 11 IYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQM 70 Query: 417 ERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSFNTLIVALCRASYT 596 G + S++Y++ + GLCK L+ L D +FN + L Sbjct: 71 GTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRI 130 Query: 597 KRAYNLFEEMSGKGIVPDIVTYTILIN 677 A +FE++ G PD+VTYTI+I+ Sbjct: 131 DLALEVFEKIVKNGRKPDVVTYTIIIH 157 >ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like [Glycine max] Length = 521 Score = 285 bits (728), Expect = 8e-75 Identities = 132/235 (56%), Positives = 177/235 (75%) Frame = +3 Query: 3 KGRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDL 182 KGRDPDV++YT +I+ L RF+ A ++W ++ +G PD AC ALV GLC G+VDL Sbjct: 148 KGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDL 207 Query: 183 AYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLN 362 AYEL V ++K V +++ VYNALI+GFC+ GRVDKA IK+FM R GC PDLVTYNILLN Sbjct: 208 AYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLN 267 Query: 363 YCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLC 542 YCC++ M++EA +L+E MER G+ PD YSYN+LLKG CKAN +++A+ +MV +M+ +G+C Sbjct: 268 YCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC 327 Query: 543 DAVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTFFGKGRADV 707 D VS+NT+I A C+A T++ Y LFEEM GKGI PD+VT+ ILI+ F +G V Sbjct: 328 DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHV 382 Score = 123 bits (309), Expect = 3e-26 Identities = 66/220 (30%), Positives = 115/220 (52%) Frame = +3 Query: 15 PDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYEL 194 PD++TY ++N + G + AV + M G PD + L+ G C+ VD A+ + Sbjct: 257 PDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLM 316 Query: 195 TVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCD 374 V+ M+ + + YN +I FC+A R K + M G PD+VT+NIL++ Sbjct: 317 MVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376 Query: 375 KIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVS 554 + +KL+++M ++ + PD Y ++ LCK +++ A+ + +E D +S Sbjct: 377 EGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVIS 436 Query: 555 FNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILI 674 +N L+ C+ S A +LF+EM KG+ PD VTY +++ Sbjct: 437 YNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIV 476 Score = 97.4 bits (241), Expect = 2e-18 Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 4/231 (1%) Frame = +3 Query: 24 ITYTTVINGLFKFGRFESAVEIWHE-MVHRGFYPDGVACGALVFGLCEQGQ---VDLAYE 191 + Y I L + R A + ++ RGF + LC + L + Sbjct: 46 VDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHS 105 Query: 192 LTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCC 371 L +DM V +N +N C+ R++ A + M G +PD+V+Y I+++ C Sbjct: 106 LLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALC 165 Query: 372 DKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAV 551 + +EA K+ ++ G++PD + L+ GLC R++ AY L+VG ++ +++ Sbjct: 166 NAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSL 225 Query: 552 SFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTFFGKGRAD 704 +N LI CR +A + MS G VPD+VTY IL+N +G D Sbjct: 226 VYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVD 276 Score = 96.7 bits (239), Expect = 4e-18 Identities = 50/161 (31%), Positives = 83/161 (51%) Frame = +3 Query: 18 DVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYELT 197 DV++Y TVI K R E++ EM +G PD V L+ +G + +L Sbjct: 328 DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLL 387 Query: 198 VDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDK 377 +M K RV+ Y A+++ C+ G+VD A + M NG PD+++YN LLN C Sbjct: 388 DEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT 447 Query: 378 IMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKA 500 + +A L ++M+ G+ PD +Y ++ GL + +++ A Sbjct: 448 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLA 488 Score = 76.3 bits (186), Expect = 6e-12 Identities = 52/196 (26%), Positives = 85/196 (43%) Frame = +3 Query: 96 EMVHRGFYPDGVACGALVFGLCEQGQVDLAYELTVDMMKRRVVMSTSVYNALINGFCQAG 275 +M GF PD A + LC Q +++ A EL M + Y +I+ C A Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAK 168 Query: 276 RVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDKIMLEEAEKLMEQMERIGINPDSYSYN 455 R D+A + + G PD L+ C ++ A +L+ + + G+ +S YN Sbjct: 169 RFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYN 228 Query: 456 QLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSFNTLIVALCRASYTKRAYNLFEEMSGK 635 L+ G C+ R++KA + + D V++N L+ C A L E M Sbjct: 229 ALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS 288 Query: 636 GIVPDIVTYTILINTF 683 G+ PD+ +Y L+ F Sbjct: 289 GVEPDLYSYNELLKGF 304 Score = 75.1 bits (183), Expect = 1e-11 Identities = 45/157 (28%), Positives = 77/157 (49%) Frame = +3 Query: 3 KGRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDL 182 KG PD++T+ +I+ + G ++ EM PD + A+V LC+ G+VD+ Sbjct: 358 KGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDV 417 Query: 183 AYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLN 362 A+ + DM++ V YNAL+NGFC+ RV A + M+ G PD VTY +++ Sbjct: 418 AHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVG 477 Query: 363 YCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGL 473 + A ++ +QM G + + L+ + Sbjct: 478 GLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAI 514 >ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa] Length = 512 Score = 279 bits (714), Expect = 3e-73 Identities = 134/236 (56%), Positives = 173/236 (73%), Gaps = 1/236 (0%) Frame = +3 Query: 3 KGRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDL 182 +GR+PDV+T+T +I+GL K +F++AV+ W M+ +G PD AC AL GLC+ GQVDL Sbjct: 143 RGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDL 202 Query: 183 AYELTVDMMKRRVV-MSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILL 359 AYEL + ++ + +ST VYNALI+GFC+AGR+DKA + SFM R GC+PDLVTYN+LL Sbjct: 203 AYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLL 262 Query: 360 NYCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGL 539 NYCC++ M EEA KL+++ME I PD YSYNQLLK CKAN +KAY MV KM +G Sbjct: 263 NYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF 322 Query: 540 CDAVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTFFGKGRADV 707 CD VS+NT+I A C S +RAY LFEEM KGI PD+VT+TILI F +G +D+ Sbjct: 323 CDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDM 378 Score = 106 bits (264), Expect = 5e-21 Identities = 64/223 (28%), Positives = 105/223 (47%) Frame = +3 Query: 6 GRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLA 185 G PD++TY ++N FE AV++ +M PD + L+ C+ D A Sbjct: 250 GCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKA 309 Query: 186 YELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNY 365 Y V M + YN +I FC +A + M R G PD+VT+ IL+ Sbjct: 310 YLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKA 369 Query: 366 CCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCD 545 + + A+KL++ M +G+ PD Y ++ CK+ ++ A+ + +E D Sbjct: 370 FLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPD 429 Query: 546 AVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILI 674 VS+N LI C++ +L+E+M +G PD VTY ++I Sbjct: 430 VVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLII 472 Score = 95.5 bits (236), Expect = 9e-18 Identities = 64/220 (29%), Positives = 99/220 (45%), Gaps = 2/220 (0%) Frame = +3 Query: 24 ITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYELTVD 203 I Y I L + RF+ A + +M GF + GLC+ + L D Sbjct: 45 IDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKD 104 Query: 204 MMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDKIM 383 M K V +N +N + R + A + M G EPD+VT+ I+++ C Sbjct: 105 MEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKK 164 Query: 384 LEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCD--AVSF 557 + A + M GI PD+ + L GLC +++ AY L++G + GL + + + Sbjct: 165 FDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISG-GLSEVSTLVY 223 Query: 558 NTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILIN 677 N LI CRA +A + MS G PD+VTY +L+N Sbjct: 224 NALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLN 263 Score = 86.7 bits (213), Expect = 4e-15 Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 1/223 (0%) Frame = +3 Query: 12 DPDVITYTTVINGLFKFGRFESA-VEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAY 188 +PDV +Y ++ K + A + + +MV +GF D V+ ++ C AY Sbjct: 287 EPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYNTIIKAFCSISNNRRAY 345 Query: 189 ELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYC 368 +L +M ++ + + LI F + G D A+ + M G PD + Y ++++ Sbjct: 346 KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHH 405 Query: 369 CDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDA 548 C +E A + M GI PD SYN L+ G CK+ R+ + L ++ D Sbjct: 406 CKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDE 465 Query: 549 VSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILIN 677 V++ +I AL R + A ++++M +G+ D +LIN Sbjct: 466 VTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLIN 508 Score = 84.0 bits (206), Expect = 3e-14 Identities = 44/146 (30%), Positives = 78/146 (53%) Frame = +3 Query: 3 KGRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDL 182 KG PDV+T+T +I + G + A ++ M G PD + ++ C+ G+V++ Sbjct: 354 KGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEM 413 Query: 183 AYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLN 362 A+ + DM+++ + YNALINGFC++ RV + + M + G PD VTY +++ Sbjct: 414 AHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIG 473 Query: 363 YCCDKIMLEEAEKLMEQMERIGINPD 440 + L +A ++ +QM G+ D Sbjct: 474 ALVRENKLSDACRVWDQMMERGLTLD 499 Score = 56.6 bits (135), Expect = 5e-06 Identities = 35/147 (23%), Positives = 66/147 (44%) Frame = +3 Query: 237 VYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDKIMLEEAEKLMEQM 416 +Y I + +AG +D A + M + C + YN + + A +M Sbjct: 11 IYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKM 70 Query: 417 ERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSFNTLIVALCRASYT 596 +G + S++Y++ + GLC+ L+ + + D +FN + L R + Sbjct: 71 APLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENRE 130 Query: 597 KRAYNLFEEMSGKGIVPDIVTYTILIN 677 + A +F M +G PD+VT+TI+I+ Sbjct: 131 ESALEVFGRMVERGREPDVVTFTIIID 157 >ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like [Cucumis sativus] gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like [Cucumis sativus] Length = 514 Score = 272 bits (696), Expect = 4e-71 Identities = 132/231 (57%), Positives = 174/231 (75%) Frame = +3 Query: 3 KGRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDL 182 KGR+PDV+TYT +++ L K +++ AVE W MV++G PD AC ALV GLC+ G+VDL Sbjct: 143 KGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDL 202 Query: 183 AYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLN 362 AYELTV MK + + ++N+L++GFC++GR+ KA IKSFM ++GCEPDL+TYNILLN Sbjct: 203 AYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLN 262 Query: 363 YCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLC 542 + CD +MLE A K M++MERIG+ PD YSYNQLLKGLCKANRL+KAY LM M +GLC Sbjct: 263 FFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLM-NTMWEKGLC 321 Query: 543 DAVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTFFGKG 695 D VS+NT+I ALC++ T++AY LFEEM K + PD+ T+ LI F +G Sbjct: 322 DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEG 372 Score = 95.9 bits (237), Expect = 7e-18 Identities = 66/229 (28%), Positives = 109/229 (47%) Frame = +3 Query: 6 GRDPDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLA 185 G +PD+ITY ++N E A + +M G PD + L+ GLC+ ++D A Sbjct: 249 GCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKA 308 Query: 186 YELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNY 365 Y+L ++ M + + T YN +I C++ KA + M + PD+ T+ L+ Sbjct: 309 YKL-MNTMWEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKA 367 Query: 366 CCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCD 545 + A+ L++ M + + PD Y ++ CK ++ A + +E D Sbjct: 368 FLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPD 427 Query: 546 AVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTFFGK 692 VS+N LI LC+AS A L+EEM +G PD VT+ ++I K Sbjct: 428 VVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRK 476 Score = 95.5 bits (236), Expect = 9e-18 Identities = 60/218 (27%), Positives = 100/218 (45%) Frame = +3 Query: 30 YTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYELTVDMM 209 Y I L RF+ A + M+ +GF + LCE L L DM Sbjct: 47 YNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMK 106 Query: 210 KRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDKIMLE 389 + + +N +N + ++ A M G EPD+VTY I+++ C + Sbjct: 107 QLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYD 166 Query: 390 EAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSFNTLI 569 +A + M G++PD + L+ GLC +++ AY L VG+M+ + + + FN+L+ Sbjct: 167 KAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLM 226 Query: 570 VALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTF 683 C++ +A + MS G PD++TY IL+N F Sbjct: 227 SGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFF 264 Score = 77.8 bits (190), Expect = 2e-12 Identities = 51/187 (27%), Positives = 84/187 (44%) Frame = +3 Query: 18 DVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYELT 197 D ++Y TVI L K A ++ EM + PD L+ +G +A L Sbjct: 322 DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLL 381 Query: 198 VDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDK 377 M + ++ Y +++ FC+ +++ AQ + M G PD+V+YN L+N C Sbjct: 382 QTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKA 441 Query: 378 IMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSF 557 + EA L E+M+ G PD ++ ++ GL + L+ A + ME D Sbjct: 442 SKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLS 501 Query: 558 NTLIVAL 578 TLI A+ Sbjct: 502 ETLIKAI 508 Score = 69.3 bits (168), Expect = 7e-10 Identities = 43/153 (28%), Positives = 73/153 (47%) Frame = +3 Query: 15 PDVITYTTVINGLFKFGRFESAVEIWHEMVHRGFYPDGVACGALVFGLCEQGQVDLAYEL 194 PDV T+ T+I G A + M PD + +V C+ ++++A + Sbjct: 356 PDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGV 415 Query: 195 TVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCD 374 DM++ + YNALING C+A +V +A ++ M+ GC PD VT+ +++ Sbjct: 416 FRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLR 475 Query: 375 KIMLEEAEKLMEQMERIGINPDSYSYNQLLKGL 473 K L A ++ +QM G D + L+K + Sbjct: 476 KKELSLACQVWDQMMEKGYTLDKFLSETLIKAI 508 Score = 60.1 bits (144), Expect = 4e-07 Identities = 40/157 (25%), Positives = 70/157 (44%) Frame = +3 Query: 207 MKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTYNILLNYCCDKIML 386 M R+ + V+ A I + G +D+A I M ++ C YN + + Sbjct: 1 MYHRLGANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRF 60 Query: 387 EEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKMEAQGLCDAVSFNTL 566 + AE +M G + ++Y++ + LC+ L+ + L D +FN Sbjct: 61 DLAESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIY 120 Query: 567 IVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILIN 677 + L R + + A F+EM KG PD+VTYTI+++ Sbjct: 121 LNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVD 157 Score = 58.9 bits (141), Expect = 1e-06 Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 1/181 (0%) Frame = +3 Query: 168 GQVDLAYELTVDMMKRRVVMSTSVYNALINGFCQAGRVDKAQVIKSFMRRNGCEPDLVTY 347 G +D A + +M + +++ YN I R D A+ S M G TY Sbjct: 23 GLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTY 82 Query: 348 NILLNYCCDKIMLEEAEKLMEQMERIGINPDSYSYNQLLKGLCKANRLNKAYFLMVGKME 527 + ++ C+ +L+E M+++G PD +++N L L + N L A +M Sbjct: 83 SRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELA-LKFFDEMV 141 Query: 528 AQGL-CDAVSFNTLIVALCRASYTKRAYNLFEEMSGKGIVPDIVTYTILINTFFGKGRAD 704 A+G D V++ ++ LC+A +A + M KG+ PD+ T L+ G+ D Sbjct: 142 AKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVD 201 Query: 705 V 707 + Sbjct: 202 L 202