BLASTX nr result

ID: Cimicifuga21_contig00015666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015666
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274106.1| PREDICTED: transmembrane protein 222-like [V...   310   3e-82
ref|XP_004146489.1| PREDICTED: protein RTE1-HOMOLOG-like [Cucumi...   299   7e-79
emb|CBI17429.3| unnamed protein product [Vitis vinifera]              295   1e-77
gb|AFK48889.1| unknown [Lotus japonicus]                              286   5e-75
ref|XP_002534132.1| conserved hypothetical protein [Ricinus comm...   285   1e-74

>ref|XP_002274106.1| PREDICTED: transmembrane protein 222-like [Vitis vinifera]
          Length = 231

 Score =  310 bits (794), Expect = 3e-82
 Identities = 149/233 (63%), Positives = 178/233 (76%)
 Frame = -1

Query: 808 MDSNTDVDSDLILQKTVPDIMQINPKRARFPCCIVWTPLPVLSWLVPFIGHIGICREDGV 629
           MDSN D +  ++++++V  +MQI+P+RARFPCCIVWTPLPV+SWL+PF+GHIGICREDGV
Sbjct: 1   MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGV 60

Query: 628 ILDFAGPNFVCVDNFAFGSVARYIQINKEKCCTSTCVDAHGSRDRNEQQPDPERGTMMTW 449
           ILDFAGPNFVCVDNFAFG+V RYIQI+KEKCC S    A   R+    Q + E   ++TW
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEI-DILTW 119

Query: 448 DDAIRKSTQEYQHRSYNLLTCNCHSFVANNLNRLGFGGPGEWNVVNLAALIFIKGRWVSK 269
           DDA+RKSTQE+QH+SYNL TCNCHSFVANNLNRLGF   G WNVVNLAALIF+KGRWVS 
Sbjct: 120 DDALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGF-YDGGWNVVNLAALIFLKGRWVST 178

Query: 268 AAMVRSXXXXXXXXXXXXXXXGWTFLAVWVLFTIVLVGWFVLGTYFFKSLIQL 110
            +M++S               G TFL     FT +LVGWF+LGTY FK+LI L
Sbjct: 179 TSMIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 231


>ref|XP_004146489.1| PREDICTED: protein RTE1-HOMOLOG-like [Cucumis sativus]
           gi|449500005|ref|XP_004160976.1| PREDICTED: protein
           RTE1-HOMOLOG-like [Cucumis sativus]
          Length = 230

 Score =  299 bits (765), Expect = 7e-79
 Identities = 144/233 (61%), Positives = 174/233 (74%)
 Frame = -1

Query: 808 MDSNTDVDSDLILQKTVPDIMQINPKRARFPCCIVWTPLPVLSWLVPFIGHIGICREDGV 629
           M+S+ D ++ L+++  +   M+I+P+RARFPCCIVWTPLPV+SWLVPFIGHIGI REDGV
Sbjct: 5   MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64

Query: 628 ILDFAGPNFVCVDNFAFGSVARYIQINKEKCCTSTCVDAHGSRDRNEQQPDPERGTMMTW 449
           ILDFAGPNFVCVDNF FG+VARY+QIN++KC    C+ AH  R   E +       + TW
Sbjct: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKC----CISAH--RSEEELREVDHSREISTW 118

Query: 448 DDAIRKSTQEYQHRSYNLLTCNCHSFVANNLNRLGFGGPGEWNVVNLAALIFIKGRWVSK 269
           DDA+R+STQE+QHR+YNLLTCNCHSFVANNLNRLGF   G WNVVNLAALIF+KGRWVSK
Sbjct: 119 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGF-RTGGWNVVNLAALIFLKGRWVSK 177

Query: 268 AAMVRSXXXXXXXXXXXXXXXGWTFLAVWVLFTIVLVGWFVLGTYFFKSLIQL 110
            A++R+                 TFL     FT  LVGWF+LGTY FK+L+QL
Sbjct: 178 GAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230


>emb|CBI17429.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score =  295 bits (754), Expect = 1e-77
 Identities = 143/213 (67%), Positives = 164/213 (76%)
 Frame = -1

Query: 748 MQINPKRARFPCCIVWTPLPVLSWLVPFIGHIGICREDGVILDFAGPNFVCVDNFAFGSV 569
           MQI+P+RARFPCCIVWTPLPV+SWL+PF+GHIGICREDGVILDFAGPNFVCVDNFAFG+V
Sbjct: 1   MQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGVILDFAGPNFVCVDNFAFGAV 60

Query: 568 ARYIQINKEKCCTSTCVDAHGSRDRNEQQPDPERGTMMTWDDAIRKSTQEYQHRSYNLLT 389
            RYIQI+KEKCC S    A   R+    Q + E   ++TWDDA+RKSTQE+QH+SYNL T
Sbjct: 61  TRYIQISKEKCCISPHHPAPYRRENGRGQDETEI-DILTWDDALRKSTQEFQHQSYNLFT 119

Query: 388 CNCHSFVANNLNRLGFGGPGEWNVVNLAALIFIKGRWVSKAAMVRSXXXXXXXXXXXXXX 209
           CNCHSFVANNLNRLGF   G WNVVNLAALIF+KGRWVS  +M++S              
Sbjct: 120 CNCHSFVANNLNRLGF-YDGGWNVVNLAALIFLKGRWVSTTSMIKSFLPFAIVSALGLFF 178

Query: 208 XGWTFLAVWVLFTIVLVGWFVLGTYFFKSLIQL 110
            G TFL     FT +LVGWF+LGTY FK+LI L
Sbjct: 179 GGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 211


>gb|AFK48889.1| unknown [Lotus japonicus]
          Length = 232

 Score =  286 bits (732), Expect = 5e-75
 Identities = 141/237 (59%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
 Frame = -1

Query: 808 MDSNTDVDSDLILQKTVPDIMQINPKRARFPCCIVWTPLPVLSWLVPFIGHIGICREDGV 629
           M+   D +   +++      MQI+P+RARFPC +VW+PLPV+SW +PFIGHIGICREDGV
Sbjct: 1   MEPELDPEQVEMMEGGFSRTMQIDPRRARFPCSVVWSPLPVISWFIPFIGHIGICREDGV 60

Query: 628 ILDFAGPNFVCVDNFAFGSVARYIQINKEKCC----TSTCVDAHGSRDRNEQQPDPERGT 461
           ILDFAGPNFVCVDNFAFG+  RY+QI KEKCC     STC D           PD   G 
Sbjct: 61  ILDFAGPNFVCVDNFAFGAATRYLQITKEKCCIPLGQSTCKD----EALCTYMPDETGGE 116

Query: 460 MMTWDDAIRKSTQEYQHRSYNLLTCNCHSFVANNLNRLGFGGPGEWNVVNLAALIFIKGR 281
           + TWDDA+RKSTQE+QHRSYNL TCNCHSFVANNLNR+GF   G WNVVNLA  I   GR
Sbjct: 117 LKTWDDALRKSTQEFQHRSYNLFTCNCHSFVANNLNRMGFLSRG-WNVVNLAIFILFNGR 175

Query: 280 WVSKAAMVRSXXXXXXXXXXXXXXXGWTFLAVWVLFTIVLVGWFVLGTYFFKSLIQL 110
           WVS A+M+R+               G+TFL  W LF  VL+GWF+LGTY FK LIQL
Sbjct: 176 WVSTASMLRTVLPFVVVFFLGVTLGGFTFLKFWALFASVLIGWFLLGTYCFKGLIQL 232


>ref|XP_002534132.1| conserved hypothetical protein [Ricinus communis]
           gi|223525804|gb|EEF28249.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 225

 Score =  285 bits (729), Expect = 1e-74
 Identities = 139/233 (59%), Positives = 167/233 (71%)
 Frame = -1

Query: 808 MDSNTDVDSDLILQKTVPDIMQINPKRARFPCCIVWTPLPVLSWLVPFIGHIGICREDGV 629
           M+ N D +  ++ ++     MQI+PKRARFPCCIVWTPLPV+SWL+PFIGHIGICREDGV
Sbjct: 1   MEENVDPERQMMFEENFQQSMQIDPKRARFPCCIVWTPLPVISWLIPFIGHIGICREDGV 60

Query: 628 ILDFAGPNFVCVDNFAFGSVARYIQINKEKCCTSTCVDAHGSRDRNEQQPDPERGTMMTW 449
           ILDFAGPNFVCVDNFAFG+V+R+IQINKEK C+     A  S D  +   D      +TW
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVSRFIQINKEKDCS-----AFSSAD--QYNMDITGRDTLTW 113

Query: 448 DDAIRKSTQEYQHRSYNLLTCNCHSFVANNLNRLGFGGPGEWNVVNLAALIFIKGRWVSK 269
           D A++K TQE+QH +Y+L TCNCHS+VANNLNRL F   G WNVVNLAA +F+KGRWVS 
Sbjct: 114 DGALQKGTQEFQHHAYSLFTCNCHSYVANNLNRLSFHS-GGWNVVNLAAFMFLKGRWVST 172

Query: 268 AAMVRSXXXXXXXXXXXXXXXGWTFLAVWVLFTIVLVGWFVLGTYFFKSLIQL 110
            + V+S               G TFL  W  FT++LVGWF+LGTY FK LIQL
Sbjct: 173 GSKVQSYLPFVMVCGIGLLLGGLTFLTFWAFFTLLLVGWFLLGTYCFKDLIQL 225


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