BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015607
         (1813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   181   7e-43
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   179   2e-42
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   172   2e-40
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   168   4e-39
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]   156   2e-35

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  181 bits (458), Expect = 7e-43
 Identities = 138/412 (33%), Positives = 197/412 (47%), Gaps = 23/412 (5%)
 Frame = +2

Query: 116  WSQLPSDLLYSIGDKLEFVPDRFRFRAICKSWRLIGLPIP-----QPPWLLLAQSEVETS 280
            WSQL  +LL  I  K +   D  RFRA+C +WR      P     Q PWL+L QS+   +
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 281  GDSATPPPRGIVGLGDQEVYKLELPEA-HDRRCVGSTGNWLITVGIDDAIRLLNPFSRVQ 457
                    R    L   + + L+LPEA H RR  GS+  WL+ +     I LLNP +R +
Sbjct: 64   H-------RPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSK 116

Query: 458  FDLPPQSTL-------------EYGVPDPS-EPYTPEL--IRDDLLRKVIVXXXXXXXXX 589
              LPP ST              EY +   S + YT  L  +RD  ++K I+         
Sbjct: 117  VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS- 175

Query: 590  XRDCIAMSIHHTRRRVGRLGVARPGGRSWVIVQTPKSVLVDIIFYKNQFYAVNMFGVLMV 769
              D IA+ I +   + G L + R    SW  ++  +S   D+IF++  FYAVN +G + V
Sbjct: 176  --DFIAVVILN---QTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAV 230

Query: 770  CDISDDLHFPNASILADCIEFERVDYRNKXXXXXXXXXXXXXIKYFVDLYPDISNFDNNE 949
            CD+S     P  SI+    +F   D +               +    D+ PD ++     
Sbjct: 231  CDVSGSS--PRVSIIEMPQQFGG-DLQYLVESGEELLLVTRYLDLTYDVEPDQTSL---- 283

Query: 950  IQPPVYRTKEFKVYQLDFTDKKWNALKSLGEHSLFLGDNTSICVSPSDYRGLVKKNCIYF 1129
                +YRT  F+V +LD    +W  + SLG+ +LFLG+N S+ +S  D+ G  K NCIY+
Sbjct: 284  ----IYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYY 338

Query: 1130 TDDYI-FGYRGTGTPGGYDMGVFDLEDNSIQPHYKGISTSLFSPPLWIIPTP 1282
            TDDY    Y G G  G  D+G+F+LED SI+P         + PPLW+ P P
Sbjct: 339  TDDYSEDNYDGIG--GEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNP 388


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  179 bits (455), Expect = 2e-42
 Identities = 139/412 (33%), Positives = 198/412 (48%), Gaps = 23/412 (5%)
 Frame = +2

Query: 116  WSQLPSDLLYSIGDKLEFVPDRFRFRAICKSWRLIGLPIP-----QPPWLLLAQSEVETS 280
            WSQL  +LL  I  K +   D  RFRA+C +WR      P     Q PWL+L QS+   +
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 281  GDSATPPPRGIVGLGDQEVYKLELPEA-HDRRCVGSTGNWLITVGIDDAIRLLNPFSRVQ 457
                    R    L   + + L+LPEA H RR  GS+  WL+ +     I LLNP +R +
Sbjct: 64   H-------RPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSK 116

Query: 458  FDLPPQSTL-------------EYGVPDPS-EPYTPEL--IRDDLLRKVIVXXXXXXXXX 589
              LPP ST              EY +   S + YT  L  +RD  ++K I+         
Sbjct: 117  VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS- 175

Query: 590  XRDCIAMSIHHTRRRVGRLGVARPGGRSWVIVQTPKSVLVDIIFYKNQFYAVNMFGVLMV 769
              D IA+ I +   + G L + R    SW  ++  +S   D+IF++  FYAVN +G + V
Sbjct: 176  --DFIAVVILN---QTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAV 230

Query: 770  CDISDDLHFPNASILADCIEFERVDYRNKXXXXXXXXXXXXXIKYFVDLYPDISNFDNNE 949
            CD+S     P  SI    IE  +  +                +  ++DL  D+   D   
Sbjct: 231  CDVSGSS--PRVSI----IEMPQ-QFGGDLQYLVESGEELLLVTRYLDLTYDVEX-DQTS 282

Query: 950  IQPPVYRTKEFKVYQLDFTDKKWNALKSLGEHSLFLGDNTSICVSPSDYRGLVKKNCIYF 1129
            +   +YRT  F+V +LD    +W  + SLG+ +LFLG+N S+ +S  D+ G  K NCIY+
Sbjct: 283  L---IYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYY 338

Query: 1130 TDDYI-FGYRGTGTPGGYDMGVFDLEDNSIQPHYKGISTSLFSPPLWIIPTP 1282
            TDDY    Y G G  G  D+G+F+LED SI+P         + PPLW+ P P
Sbjct: 339  TDDYSEDNYDGIG--GEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNP 388


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  172 bits (437), Expect = 2e-40
 Identities = 124/418 (29%), Positives = 205/418 (49%), Gaps = 29/418 (6%)
 Frame = +2

Query: 116  WSQLPSDLLYSIGDKLEFVPDRFRFRAICKSWRLI------GLPIPQPPWLLLAQSEVET 277
            WSQLP +L+  I   L    D    RA+C +WR         LP PQ PWL+L QS+ ++
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLP-PQLPWLMLPQSQSQS 63

Query: 278  SGDSATPPPRGIVGLGDQEVYKLELPE-AHDRRCVGSTGNWLITVGIDDAIRLLNPFSRV 454
            +        R    L   + + L LPE ++ +R  GS+  WL+ +     I L+NP +R 
Sbjct: 64   NQSR-----RAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRA 118

Query: 455  QFDLPPQST----LEYGVPDPSEPY------------TPELIRDDLLRKVIVXXXXXXXX 586
            +  LPP S+    + +   D    Y            +   +RD  +RKV++        
Sbjct: 119  KLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKD- 177

Query: 587  XXRDCIAMSIHHTRRRVGRLGVARPGGRSWVIVQTPKSVLVDIIFYKNQFYAVNMFGVLM 766
               + + ++I +   +   L   R G +SW +V+  +S   D+IF    FYAVN  G ++
Sbjct: 178  --NNFVVIAILN---QTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIV 232

Query: 767  VCDISDDLHFPNASILADCIEFERVDYRNKXXXXXXXXXXXXXIKYFVDLYPDIS-NFDN 943
            +CDIS D   P  S +         +   +                 V  Y D+   FD+
Sbjct: 233  ICDISSD--SPRVSFM---------ETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDH 281

Query: 944  NEIQPP-VYRTKEFKVYQLDFTDKKWNALKSLGEHSLFLGDNTSICVSPSDYRGLVKKNC 1120
             +++P  +YRT  F+V++LD+   +W  + +LG+ +LF+G+N+S+ +S +D+ G +  NC
Sbjct: 282  PDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCM-GNC 340

Query: 1121 IYFTDDYIFGYRGTGTPGGYDMGVFDLEDNSIQP---HYKGISTSL-FSPPLWIIPTP 1282
            IY+TDDY+      G  G +D+G+F L D +I+P   + +  ++ L +SPPLW+ P P
Sbjct: 341  IYYTDDYL-DANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNP 397


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  168 bits (426), Expect = 4e-39
 Identities = 127/414 (30%), Positives = 187/414 (45%), Gaps = 16/414 (3%)
 Frame = +2

Query: 86   KKMAATADTGWSQLPSDLLYSIGDKLEFVPDRFRFRAICKSWRLIG------LPIPQPPW 247
            +K+  T    WS++P D L  I +KL  V D  RF  +CKSW  I        P  + PW
Sbjct: 912  QKINQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPW 971

Query: 248  LLLAQSEVETSGDSATPPPRGIVGLGDQEVYKLELPEAHDRRCVGSTGNWLITVGIDDAI 427
            L+LA+ E            RG       +VY++ LPE   + C GS   WL+T+G D  +
Sbjct: 972  LMLAEKE--------NSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDM 1023

Query: 428  RLLNPFSRVQFDLPPQSTLEYGVPDPSEPYTPELIRDDLLRKVIVXXXXXXXXXXRDCIA 607
             LLNP +RVQ  LP                     +D  + K ++           DC  
Sbjct: 1024 CLLNPLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSSP----DCAV 1079

Query: 608  MSIHHTRRRVGRLGVARPGGRSWVIVQTPKSVLVDIIFYKNQFYAVNMFGVLMVCDISDD 787
            M I+      GRL   +PG ++W ++++    + DII++   F AVN+   + +CDIS  
Sbjct: 1080 MIIYSD---YGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGS 1136

Query: 788  ----LHFPNASILADCIEFERVDYRNKXXXXXXXXXXXXXIKYFVDLYPDI-----SNFD 940
                + F  A  L D  E E                     KY V+   +I     + +D
Sbjct: 1137 QLKTIRFAAAPALQDVDEIE------------------YEAKYLVESGGEIYMVTRNLYD 1178

Query: 941  NNEIQPPVYRTKEFKVYQLDFTDKKWNALKSLGEHSLFLGDNTSICVSPSDYRGLVKKNC 1120
                  P  RT  F V +LD  +K+W  +++L   S FLG+N S     SDY    +KN 
Sbjct: 1179 TARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEF-RKNS 1237

Query: 1121 IYFTDDYIFGYRGTGTPGGYDMGVFDLEDNSIQPHYKG-ISTSLFSPPLWIIPT 1279
            IYFTDDY  G+     P  +DMG+++ ++  I+ +  G  + S+FS PLWI P+
Sbjct: 1238 IYFTDDYC-GF--LNIPRNFDMGIYNFQNTQIEHYPVGHDALSMFSAPLWIRPS 1288


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score =  156 bits (394), Expect = 2e-35
 Identities = 125/417 (29%), Positives = 189/417 (45%), Gaps = 28/417 (6%)
 Frame = +2

Query: 110  TGWSQLPSDLLYSIGDKLEFVPDRFRFRAICKSWRLIGLPI---------PQPPWLLLAQ 262
            T WS+LP +L+  I D+L+   D  RF  +C+ W L+ L           P  P LLL  
Sbjct: 4    TDWSKLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLLLPP 63

Query: 263  SEVETSGDSATPPPRGIVGLGDQEVYKLELPEAHDRRCVGSTGNWLITVG--IDDAIRLL 436
            ++ + +          +     ++ YK+++P   D+ C  S   WLIT+       I  L
Sbjct: 64   NKDDGA--------HKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCL 115

Query: 437  NPFSRVQFDLPPQSTLEYGVPDPSEPYTPELIRDDLLRKVIVXXXXXXXXXXRDCIAMSI 616
            NP S VQ DLPP  T E   PD  E  TP    +  L KV++           +C+ M+I
Sbjct: 116  NPISGVQIDLPPAITFEDSPPDLDE--TP---IEFFLNKVVL--SSTPSPSNANCVIMAI 168

Query: 617  HHTRRRVGRLGVARPGGRSWVIVQTPKSVLVDIIFYKNQFYAVNMFGVLMVCDISDDLHF 796
            H       +L   +PG + W+ +++      D+++YK+ FYA+    V+  CDI DD   
Sbjct: 169  H---SNYNKLAFCKPGDKRWITLKSEDIQYKDLLYYKDNFYAIGRSKVVQ-CDIGDDPRV 224

Query: 797  PNASIL--------------ADCIEF--ERVDYRNKXXXXXXXXXXXXXIKYFVDLYPDI 928
               ++L              + C+ +    +D ++               K F DL  D 
Sbjct: 225  IPFALLPKMGYFQYRYLVESSGCLLYVLRYMDLKDN-EDPLKLRYETTGFKVF-DLDSDK 282

Query: 929  SNFDNNEIQPPVYRTKEFKVYQLDFTDKKWNALKSLGEHSLFLGDNTSICVSPSDYRGLV 1108
              F         Y T  FKVY  DF  KKW  +K++ E +L LG N +I +S   + G  
Sbjct: 283  RKFSYR------YETTTFKVYNFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDGF- 335

Query: 1109 KKNCIYFTDDYIFGYRGTGTPGGYDMGVFDLEDNSIQPHYKGISTSLFSPPL-WIIP 1276
            K N IYF DDY  GY    T G +DMGVF+++ +  +P +    T L++ PL W+ P
Sbjct: 336  KSNHIYFLDDYKEGY-FENTYGCHDMGVFNIKTHLFKPIFH--RTQLWASPLFWMRP 389