BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015544
         (902 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi...   141   2e-31
ref|XP_002863428.1| hypothetical protein ARALYDRAFT_356389 [Arab...   102   6e-29
ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    85   7e-27
ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [...   109   2e-24
ref|YP_001661426.1| cytochrome c oxidase subunit 2 [Cycas taitun...   110   6e-22

>gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea]
           gi|157102084|gb|ABV23662.1| cytochrome oxidase subunit 2
           [Boehmeria nivea] gi|157102086|gb|ABV23663.1| cytochrome
           oxidase subunit 2 [Boehmeria nivea]
          Length = 310

 Score =  141 bits (356), Expect = 2e-31
 Identities = 67/71 (94%), Positives = 68/71 (95%)
 Frame = -3

Query: 900 LGVKCDAVPGRLNQTSILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRTTR 721
           LGVKCDAVPGRLNQ SILVQREGVYYGQCSEICGTNHAF RAPGNIGR+ SPLWLSRTTR
Sbjct: 224 LGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFMRAPGNIGRVPSPLWLSRTTR 283

Query: 720 GASHPRSKLLQ 688
           GASHPRSKLLQ
Sbjct: 284 GASHPRSKLLQ 294


>ref|XP_002863428.1| hypothetical protein ARALYDRAFT_356389 [Arabidopsis lyrata subsp.
           lyrata] gi|297309263|gb|EFH39687.1| hypothetical protein
           ARALYDRAFT_356389 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  102 bits (253), Expect(2) = 6e-29
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = -3

Query: 897 GVKCDAVPGRLNQTSILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLS 748
           GVKCD VPGRLNQ SILVQREGVYYGQCSEICG NHAFTRAPGNIGRLLS
Sbjct: 183 GVKCDVVPGRLNQISILVQREGVYYGQCSEICGNNHAFTRAPGNIGRLLS 232



 Score = 52.4 bits (124), Expect(2) = 6e-29
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -1

Query: 749 AHSGSAAPPGVRATREASYYSERLEL 672
           +HSGSAAPPGV+ATREASYYSERLEL
Sbjct: 232 SHSGSAAPPGVQATREASYYSERLEL 257


>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 85.1 bits (209), Expect(2) = 7e-27
 Identities = 43/46 (93%), Positives = 43/46 (93%)
 Frame = +3

Query: 516 MPSTRALLATNH*LAGRSGSAFQVRYPNRLLCSTGSLAPSSIFSTA 653
           MPSTRALLATNH LAGR GSAFQVRYPNRLLCSTGSLAPSSI STA
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAPSSILSTA 46



 Score = 62.4 bits (150), Expect(2) = 7e-27
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = +2

Query: 698 LLLGWLAPRVVRLSQSGLSSRPMFPGARVKA 790
           LLLGWLAP VVRLSQSGLSSRPMFPGARVKA
Sbjct: 60  LLLGWLAPEVVRLSQSGLSSRPMFPGARVKA 90


>ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis]
           gi|223533482|gb|EEF35227.1| cytochrome C oxidase,
           subunit II, putative [Ricinus communis]
          Length = 139

 Score =  109 bits (273), Expect(2) = 2e-24
 Identities = 50/59 (84%), Positives = 55/59 (93%)
 Frame = -2

Query: 769 KHRPTAEPTLAQPHHPGCEPPEKQAITASGWSCREPRSKAVEKIEEGARLPVEQRRRLG 593
           KHRPTAE TLAQPHHPGC+PP+KQ ITAS WSCREPRSKAV+KI+EGARL VEQRR+LG
Sbjct: 81  KHRPTAESTLAQPHHPGCDPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQRRQLG 139



 Score = 29.3 bits (64), Expect(2) = 2e-24
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = -3

Query: 894 VKCDAVPGRLNQTSILVQR 838
           VKCD VPGRLN  SI   R
Sbjct: 65  VKCDVVPGRLNHISISKHR 83


>ref|YP_001661426.1| cytochrome c oxidase subunit 2 [Cycas taitungensis]
           gi|166706964|dbj|BAF98428.1| cytochrome c oxidase
           subunit 2 [Cycas taitungensis]
          Length = 268

 Score =  110 bits (274), Expect = 6e-22
 Identities = 53/57 (92%), Positives = 53/57 (92%)
 Frame = -3

Query: 897 GVKCDAVPGRLNQTSILVQREGVYYGQCSEICGTNHAFTRAPGNIGRLLSPLWLSRT 727
           GVKCDAVPGRLNQTSI VQREGVYYGQCSEI GTNHA TRAPG IGRLLSPLWLSRT
Sbjct: 195 GVKCDAVPGRLNQTSISVQREGVYYGQCSEIRGTNHASTRAPGYIGRLLSPLWLSRT 251