BLASTX nr result

ID: Cimicifuga21_contig00015510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015510
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   166   2e-39
dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa I...   164   7e-39
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                164   7e-39
emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]                164   7e-39
emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]                164   7e-39

>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/115 (68%), Positives = 90/115 (78%)
 Frame = -3

Query: 356  GLGCVLMQEGKAVAYASR*LKPHETRYPTHDLELAAVVFVLKIWRHYLYG*RFELFTDHK 177
            GLGCVLMQ GK +AYASR LKP+E  YPTHDLELAA+VF LKIWRHYLYG    +FTDHK
Sbjct: 898  GLGCVLMQNGKVIAYASRQLKPYEVNYPTHDLELAAIVFALKIWRHYLYGVTCRIFTDHK 957

Query: 176  SLKYLKSQKDLNMRQT*WMEFISSYDFDI*YHIGKRNVVADALSRQLGSTLSATI 12
            SLKY+ +QKDLNMRQ  W+E I  YD DI YH GK NVVADALSR+   +L+  +
Sbjct: 958  SLKYIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKANVVADALSRKSSHSLNTLV 1012


>dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1727

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/106 (74%), Positives = 87/106 (82%)
 Frame = -3

Query: 356  GLGCVLMQEGKAVAYASR*LKPHETRYPTHDLELAAVVFVLKIWRHYLYG*RFELFTDHK 177
            GLGCVLMQEGK VAYASR L+PHE  YPTHDLELAAVV  LKIWRHYLYG R E++TDHK
Sbjct: 1096 GLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHK 1155

Query: 176  SLKYLKSQKDLNMRQT*WMEFISSYDFDI*YHIGKRNVVADALSRQ 39
            SLKY+ +Q DLNMRQ  W+E I  YD +I YH GK NVVADALSR+
Sbjct: 1156 SLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRK 1201


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/106 (74%), Positives = 87/106 (82%)
 Frame = -3

Query: 356  GLGCVLMQEGKAVAYASR*LKPHETRYPTHDLELAAVVFVLKIWRHYLYG*RFELFTDHK 177
            GLGCVLMQEGK VAYASR L+PHE  YPTHDLELAAVV  LKIWRHYLYG R E++TDHK
Sbjct: 850  GLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHK 909

Query: 176  SLKYLKSQKDLNMRQT*WMEFISSYDFDI*YHIGKRNVVADALSRQ 39
            SLKY+ +Q DLNMRQ  W+E I  YD +I YH GK NVVADALSR+
Sbjct: 910  SLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRK 955


>emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]
          Length = 1641

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/106 (74%), Positives = 87/106 (82%)
 Frame = -3

Query: 356  GLGCVLMQEGKAVAYASR*LKPHETRYPTHDLELAAVVFVLKIWRHYLYG*RFELFTDHK 177
            GLGCVLMQEGK VAYASR L+PHE  YPTHDLELAAVV  LKIWRHYLYG R E++TDHK
Sbjct: 1010 GLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHK 1069

Query: 176  SLKYLKSQKDLNMRQT*WMEFISSYDFDI*YHIGKRNVVADALSRQ 39
            SLKY+ +Q DLNMRQ  W+E I  YD +I YH GK NVVADALSR+
Sbjct: 1070 SLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRK 1115


>emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]
          Length = 1451

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/106 (74%), Positives = 87/106 (82%)
 Frame = -3

Query: 356  GLGCVLMQEGKAVAYASR*LKPHETRYPTHDLELAAVVFVLKIWRHYLYG*RFELFTDHK 177
            GLGCVLMQEGK VAYASR L+PHE  YPTHDLELAAVV  LKIWRHYLYG R E++TDHK
Sbjct: 850  GLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHK 909

Query: 176  SLKYLKSQKDLNMRQT*WMEFISSYDFDI*YHIGKRNVVADALSRQ 39
            SLKY+ +Q DLNMRQ  W+E I  YD +I YH GK NVVADALSR+
Sbjct: 910  SLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRK 955


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