BLASTX nr result

ID: Cimicifuga21_contig00015504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015504
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298771.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002460946.1| hypothetical protein SORBIDRAFT_02g037980 [S...    56   3e-06

>ref|XP_002298771.1| predicted protein [Populus trichocarpa] gi|222846029|gb|EEE83576.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -2

Query: 325 QLQSTTDNDPQSKVVSLLDLHDNMVQTRLITQSVAMTSPSRT-DTNSTSPDSIKDAVKLI 149
           QL     ND Q  V     L D++  TRLI  S+      RT DT+  +PD++ +A++L 
Sbjct: 422 QLLKAKGNDQQLSVDKFFTLQDDLNNTRLILHSLTSIGQRRTADTDPNAPDAVGEALRLA 481

Query: 148 LERKKCAISWIKAAMASDLSHPTD 77
           L+RK+ A SW KAA+ASDL+  +D
Sbjct: 482 LDRKQNATSWTKAAVASDLNPISD 505


>ref|XP_002460946.1| hypothetical protein SORBIDRAFT_02g037980 [Sorghum bicolor]
           gi|241924323|gb|EER97467.1| hypothetical protein
           SORBIDRAFT_02g037980 [Sorghum bicolor]
          Length = 648

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = -2

Query: 325 QLQSTTDNDPQSKVVSLLDLHDNMVQTRLITQSVA-MTSPSRTDTNSTSPDSIKDAVKLI 149
           +L S  D+DP+  +   L L   +     I QS A +  P    +NSTS  S + A K  
Sbjct: 395 ELHSDKDDDPKELIGRFLKLSQELDHAIFIAQSQARLRHPKACCSNSTSSASPRAATKAA 454

Query: 148 LERKKCAISWIKAAMASDLSH 86
           L+RK+ AISW++AA+ +DLSH
Sbjct: 455 LDRKQSAISWVRAAIEADLSH 475


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