BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015490
         (1906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ...   416   e-114
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...   412   e-112
ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   385   e-104
ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like...   364   4e-98
ref|XP_003537469.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   357   5e-96

>ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera]
            gi|296086183|emb|CBI31624.3| unnamed protein product
            [Vitis vinifera]
          Length = 453

 Score =  416 bits (1070), Expect = e-114
 Identities = 232/469 (49%), Positives = 295/469 (62%), Gaps = 1/469 (0%)
 Frame = +3

Query: 303  SLYGALEVLLKDILSVIKPFDEDVRIRHHVINEFKSVVACVESLRGATVEPFGSFISNLY 482
            S +  LE++LKDIL VI P  ED  IR+ +I +F++ V  VESLRGATVEPFGSF+SNLY
Sbjct: 2    STFNVLEIVLKDILLVINPSREDWAIRNQLIADFRTAVDSVESLRGATVEPFGSFLSNLY 61

Query: 483  TRWGDLDISIEIPSDSLVSPVGKNRKQSLLRDLRRALQKRGIARNIQFIPKARVPLLIFD 662
            T+WGDLDISIE+P+ + +S  GK  KQ+LL  +  AL+ +G  R +QFIP ARVP++ F+
Sbjct: 62   TQWGDLDISIELPNGAYISSAGKRHKQTLLGHVLNALRSKGGWRKLQFIPNARVPIIKFE 121

Query: 663  SNYRNISCDISVSNLPGQLKSKLFFWITEIDERFRDMVLLVKEWAKAQNINNPKTGTLNS 842
            S + NISCD+S++NL GQ+KSK  FWI+ ID RFRD+VLLVKEWA+A +INN KTGTLNS
Sbjct: 122  SYHPNISCDVSINNLKGQMKSKFLFWISGIDGRFRDLVLLVKEWARAHDINNSKTGTLNS 181

Query: 843  YSLSLLVIFHFQTCEPPILPPLQEIYAGNFTHDLKGERVAAERDIQDICANNIASFKTNK 1022
            YSLSLLV+FH QTC P ILPPL+EIY GN   DL G R   E  I++  A NI  FK ++
Sbjct: 182  YSLSLLVVFHLQTCRPAILPPLKEIYPGNVADDLIGVRAVVEGQIEETSAANINRFKRDR 241

Query: 1023 MEYSNRSPLAELFISFFRKFSRIDTMALEHCICPYTGKWERTMTKNKWMGKDYPLIIEDP 1202
                NRS L+ELFISF  KF  I + A E  ICPYTG+W    +  +WM + Y L +EDP
Sbjct: 242  SRAPNRSSLSELFISFLAKFVDITSRASEQGICPYTGQWVDIDSNMRWMPRTYELFVEDP 301

Query: 1203 FDQSDNCARSVGKNQLMMISGAFWETYRKL-SSNQDQGSLITSLVRPQIRSNFTAGSQGN 1379
            F+Q +N AR V   QL  IS AF  T+++L S+NQDQ SLI +LVRPQI          N
Sbjct: 302  FEQPENTARGVRSRQLQRISEAFQTTHQRLTSANQDQHSLIDTLVRPQIAQFIRRAPSRN 361

Query: 1380 RNVHGASSSRQIHGQLDPYXXXXXXXXXXXXXXXVHTTSNTFQNMRLDVRPSPSAVYSQR 1559
             + +G ++SR      +                      N FQN R   RP+ +   SQR
Sbjct: 362  SSAYGRNNSRTYPSVPNVANSPLQF-------------QNDFQNRRPQSRPNTT---SQR 405

Query: 1560 PPFSSPAPTIQNQHENRRTETTPSPSPYPQRSGGQPVHGQGQQMWRPRS 1706
               S+P     N    +R+  T   S   QRS  Q    Q Q++WRPRS
Sbjct: 406  ---SAPVQARPNSVTMQRSMYTRPGSSTVQRSVQQATQSQSQRVWRPRS 451


>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
            gi|223536493|gb|EEF38140.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  412 bits (1060), Expect = e-112
 Identities = 234/494 (47%), Positives = 297/494 (60%), Gaps = 28/494 (5%)
 Frame = +3

Query: 309  YGALEVLLKDILSVIKPFDEDVRIRHHVINEFKSVVACVESLRGATVEPFGSFISNLYTR 488
            +  LE +L+D L VIKP  ED  +R  +I E K V+A +ESLRGATVEPFGSF+SNL+TR
Sbjct: 4    HSVLEPILRDTLEVIKPLREDWAVRSKIIEELKDVIASIESLRGATVEPFGSFVSNLFTR 63

Query: 489  WGDLDISIEIPSDSLVSPVGKNRKQSLLRDLRRALQKRGIARNIQFIPKARVPLLIFDSN 668
            WGDLDISI + + S +S   K RKQ++LR+  +AL+++G  R +QF+P ARVPLL F+S 
Sbjct: 64   WGDLDISIMLANGSYISSAAKKRKQNVLREFHKALRQKGGWRRLQFVPNARVPLLKFESG 123

Query: 669  YRNISCDISVSNLPGQLKSKLFFWITEIDERFRDMVLLVKEWAKAQNINNPKTGTLNSYS 848
             +NISCD+S+ NL GQ+KS   FW+ +ID RFRDMVLLVKEWAKA NINNPKTGTLNSYS
Sbjct: 124  RQNISCDVSIDNLQGQIKSNFLFWLNQIDGRFRDMVLLVKEWAKAHNINNPKTGTLNSYS 183

Query: 849  LSLLVIFHFQTCEPPILPPLQEIYAGNFTHDLKGERVAAERDIQDICANNIASFKTNKME 1028
            LSLLVIFHFQTC P ILPPL+EIY  N   DL G R  AE  I++ C  NIA + ++K  
Sbjct: 184  LSLLVIFHFQTCVPAILPPLKEIYPRNVVDDLTGVRTVAEERIKETCNANIARYMSDKYR 243

Query: 1029 YSNRSPLAELFISFFRKFSRIDTMALEHCICPYTGKWERTMTKNKWMGKDYPLIIEDPFD 1208
              NRS L+ELFISFF KFS I   A +  IC +TG+W    +  +W+ K Y L IEDPF+
Sbjct: 244  AVNRSSLSELFISFFAKFSGISLKAADLGICTFTGQWLDIRSTMRWLPKTYALFIEDPFE 303

Query: 1209 QSDNCARSVGKNQLMMISGAFWETYRKL-SSNQDQGSLITSLVRPQIRS--------NFT 1361
            Q +N AR+V    L+ I+ AF  TY KL  +NQ++ SL+ +LVRP+I +        N +
Sbjct: 304  QPENAARAVSAGNLVKIAEAFQTTYHKLVLANQNRTSLLGTLVRPEILNCIAGTPVRNLS 363

Query: 1362 AGSQGNRNVH-----GASSSRQIHGQLDPYXXXXXXXXXXXXXXXVHTTSNT----FQNM 1514
              S   ++ H        SS Q+  Q                    H  S+      QN 
Sbjct: 364  YTSLHYQSTHPQISKSMYSSPQVQHQFQNMRQEKHQKIFTAQRQEKHPHSSNSQYRVQNT 423

Query: 1515 RLDVRPSPSAVYSQRPPFSSPAPT----------IQNQHENRRTETTPSPSPYPQRSGGQ 1664
            RL+  PS  A        S P  T          +Q Q  N  T T   P+ Y       
Sbjct: 424  RLEKHPSYLAKQGHE---SHPENTRLERHPNYFAMQKQESNVNTSTRKKPAQY------- 473

Query: 1665 PVHGQGQQMWRPRS 1706
              HGQGQQ+WRP+S
Sbjct: 474  -YHGQGQQLWRPKS 486


>ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus]
            gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA
            polymerase GLD2-like [Cucumis sativus]
          Length = 464

 Score =  385 bits (990), Expect = e-104
 Identities = 216/467 (46%), Positives = 289/467 (61%), Gaps = 4/467 (0%)
 Frame = +3

Query: 318  LEVLLKDILSVIKPFDEDVRIRHHVINEFKSVVACVESLRGATVEPFGSFISNLYTRWGD 497
            L+ ++KDIL V++P  +D   R  VINE ++VV  +ESLRGAT+EPFGSF+SNL++RWGD
Sbjct: 6    LDRVIKDILRVVEPLQDDWTARFQVINELRNVVQSIESLRGATIEPFGSFVSNLFSRWGD 65

Query: 498  LDISIEIPSDSLVSPVGKNRKQSLLRDLRRALQKRGIARNIQFIPKARVPLLIFDSNYRN 677
            LD+S+++ + S  S  GK RKQ+LLRD++ A +K G    +Q IP ARVP+L  +    N
Sbjct: 66   LDLSVQLNNGSYTSTAGKKRKQTLLRDIQNASRKNGRWYKLQLIPHARVPILKIEHIQHN 125

Query: 678  ISCDISVSNLPGQLKSKLFFWITEIDERFRDMVLLVKEWAKAQNINNPKTGTLNSYSLSL 857
            ISCDIS+ NL GQ+KSK+  W+ EID RF DMVLLVKEWAKA +INN K GT NSYSLSL
Sbjct: 126  ISCDISIDNLVGQIKSKILLWVNEIDGRFHDMVLLVKEWAKAHDINNSKQGTFNSYSLSL 185

Query: 858  LVIFHFQTCEPPILPPLQEIYAGNFTHDLKGERVAAERDIQDICANNIASFKTNKMEYSN 1037
            LVIFHFQTC P I PPL++IY GN   +LKG R   E +I   CA NIA FK+     +N
Sbjct: 186  LVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVRAEVENEIARTCATNIARFKSRT---AN 242

Query: 1038 RSPLAELFISFFRKFSRIDTMALEHCICPYTGKWERTMTKNKWMGKDYPLIIEDPFDQSD 1217
            RS L+ELF+SF  KFS I + A E  ICPYTG+W +  +  +W+ K Y + +EDPF+Q +
Sbjct: 243  RSSLSELFVSFLAKFSDISSKASELGICPYTGQWLKIESNMRWLPKTYAIFVEDPFEQPE 302

Query: 1218 NCARSVGKNQLMMISGAFWETYRKLSS-NQDQGSLITSLVRPQIRSNFTAGSQGNRNVHG 1394
            N AR++   QLM IS AF  T+ +L+S  Q++ S++  L RPQI       SQ   N  G
Sbjct: 303  NTARAINARQLMRISEAFRMTHLRLTSVYQNRSSILNDLARPQI-------SQLIINSSG 355

Query: 1395 ASSSRQIHGQLDPYXXXXXXXXXXXXXXXVHTTSNTFQN--MRLDVRPSPSAVYSQRPPF 1568
            ++S+   +  ++ Y                    + FQN   R ++   P A+ SQ P  
Sbjct: 356  SASAPAFN--VENYTPIRPQVHQARVMQPRPWIQHQFQNNIPRFNMGNFP-AINSQAPHA 412

Query: 1569 SSPAPTIQNQHENRRTE-TTPSPSPYPQRSGGQPVHGQGQQMWRPRS 1706
             +       QH+  +T+    SP+        +   GQGQQ WRPRS
Sbjct: 413  GTSQSHPLVQHKTPKTKRIVSSPNVLNVGEPSKTYSGQGQQKWRPRS 459


>ref|XP_003552863.1| PREDICTED: poly(A) RNA polymerase cid11-like [Glycine max]
          Length = 415

 Score =  364 bits (935), Expect = 4e-98
 Identities = 184/344 (53%), Positives = 241/344 (70%), Gaps = 1/344 (0%)
 Frame = +3

Query: 303  SLYGALEVLLKDILSVIKPFDEDVRIRHHVINEFKSVVACVESLRGATVEPFGSFISNLY 482
            S +  L++++ DIL V+ P  ED  IR  +IN+ +S+V  VESLRGATVEPFGSF+SNL+
Sbjct: 2    STHSTLDIVVNDILRVVTPVQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSNLF 61

Query: 483  TRWGDLDISIEIPSDSLVSPVGKNRKQSLLRDLRRALQKRGIARNIQFIPKARVPLLIFD 662
            TRWGDLDISIE+ +   +S  GK +KQ+ L D+ +AL+ +G   N+QFI  ARVP+L F 
Sbjct: 62   TRWGDLDISIELSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILKFK 121

Query: 663  SNYRNISCDISVSNLPGQLKSKLFFWITEIDERFRDMVLLVKEWAKAQNINNPKTGTLNS 842
            S  + +SCDIS++NLPGQ+KSK+  WI +ID RFR MVLLVKEWAKA  INN K GT NS
Sbjct: 122  SYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFNS 181

Query: 843  YSLSLLVIFHFQTCEPPILPPLQEIYAGNFTHDLKGERVAAERDIQDICANNIASFKTNK 1022
            YSLSLLVIF+FQTC P I PPL++IY GN   DL G R  AE  I   C  NI  F +N+
Sbjct: 182  YSLSLLVIFYFQTCIPAIFPPLKDIYPGNMVDDLIGVRSDAENLIAQTCDANINRFISNR 241

Query: 1023 MEYSNRSPLAELFISFFRKFSRIDTMALEHCICPYTGKWERTMTKNKWMGKDYPLIIEDP 1202
                NR  +AELF+ F  KF+++D+MA++  ICPY+GKWE+      W+ K Y + +EDP
Sbjct: 242  ARSINRKSVAELFVEFIGKFAKMDSMAVKMGICPYSGKWEQIEDNMIWLPKTYAIFVEDP 301

Query: 1203 FDQSDNCARSVGKNQLMMISGAFWETYRKL-SSNQDQGSLITSL 1331
            F+Q  N ARSV   QL  I+ AF  T+  L S+NQ+Q SL++++
Sbjct: 302  FEQPQNTARSVSAGQLKKITEAFARTHDLLTSTNQNQISLLSNM 345


>ref|XP_003537469.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Glycine max]
          Length = 328

 Score =  357 bits (917), Expect = 5e-96
 Identities = 177/323 (54%), Positives = 228/323 (70%)
 Frame = +3

Query: 303  SLYGALEVLLKDILSVIKPFDEDVRIRHHVINEFKSVVACVESLRGATVEPFGSFISNLY 482
            S +  L++++ DIL V+ P  ED  IR  +IN+F+S+V  VESLRGATVEP+GSF+SNL+
Sbjct: 2    STHSMLDIVVNDILRVVTPLQEDWEIRFAIINDFRSIVESVESLRGATVEPYGSFVSNLF 61

Query: 483  TRWGDLDISIEIPSDSLVSPVGKNRKQSLLRDLRRALQKRGIARNIQFIPKARVPLLIFD 662
            TRWGDLDISIE+ +   +S  GK +KQ+LL ++ +AL+ +G   N+QFI  ARVP+L F 
Sbjct: 62   TRWGDLDISIELSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFISNARVPILKFK 121

Query: 663  SNYRNISCDISVSNLPGQLKSKLFFWITEIDERFRDMVLLVKEWAKAQNINNPKTGTLNS 842
            S  + +SCDIS++NLPGQ+KSK+  WI +ID RFR MVLLVKEWAKA  INN K GT NS
Sbjct: 122  SYRQGVSCDISINNLPGQMKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFNS 181

Query: 843  YSLSLLVIFHFQTCEPPILPPLQEIYAGNFTHDLKGERVAAERDIQDICANNIASFKTNK 1022
            YSLSLLVIF+FQTC P I PPL++IY GN   DL G R  AE  I + C  NI  F +N+
Sbjct: 182  YSLSLLVIFYFQTCIPAIFPPLKDIYPGNMIDDLIGIRSDAENLIAETCDANINRFISNR 241

Query: 1023 MEYSNRSPLAELFISFFRKFSRIDTMALEHCICPYTGKWERTMTKNKWMGKDYPLIIEDP 1202
                NR  +AELF+ F  KF+++D+MA+E  ICPYTGKWE+      W+ K Y + +EDP
Sbjct: 242  ARSINRKSVAELFVDFVGKFAKMDSMAVEMGICPYTGKWEQIEDNMIWLPKTYAIFVEDP 301

Query: 1203 FDQSDNCARSVGKNQLMMISGAF 1271
            F+Q  N ARSV   QL  I+  F
Sbjct: 302  FEQPQNTARSVSAGQLKKITETF 324