BLASTX nr result

ID: Cimicifuga21_contig00015474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015474
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...    61   1e-07
ref|XP_004138422.1| PREDICTED: DNA replication complex GINS prot...    58   7e-07
ref|XP_002878035.1| hypothetical protein ARALYDRAFT_485976 [Arab...    57   2e-06
ref|XP_002513028.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/36 (77%), Positives = 33/36 (91%), Gaps = 1/36 (2%)
 Frame = -2

Query: 294 LYEAARSSMTAFKKWRVGGPRFERASIL-KKRKPTD 190
           LYE A+SSM AFKKWR+GGPRF+RAS+L +KRKPTD
Sbjct: 151 LYETAQSSMAAFKKWRMGGPRFQRASVLGRKRKPTD 186


>ref|XP_004138422.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis
           sativus] gi|449519657|ref|XP_004166851.1| PREDICTED: DNA
           replication complex GINS protein PSF3-like [Cucumis
           sativus]
          Length = 189

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/37 (72%), Positives = 34/37 (91%), Gaps = 1/37 (2%)
 Frame = -2

Query: 297 QLYEAARSSMTAFKKWRVGGPRFERASIL-KKRKPTD 190
           ++YEAA+SSMTAFKKWR+GGPRF+RAS L +KRK T+
Sbjct: 153 KMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 189


>ref|XP_002878035.1| hypothetical protein ARALYDRAFT_485976 [Arabidopsis lyrata subsp.
           lyrata] gi|297323873|gb|EFH54294.1| hypothetical protein
           ARALYDRAFT_485976 [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = -2

Query: 294 LYEAARSSMTAFKKWRVGGPRFERASIL-KKRKPTD 190
           LYEAA  SMTAFKKWR GGPRF+RASIL +KRK +D
Sbjct: 150 LYEAAHLSMTAFKKWRTGGPRFQRASILGRKRKDSD 185


>ref|XP_002513028.1| conserved hypothetical protein [Ricinus communis]
           gi|223548039|gb|EEF49531.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/36 (75%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = -2

Query: 294 LYEAARSSMTAFKKWRVGGPRFERASIL-KKRKPTD 190
           LYEAA+ SM AFKKWR+GGPR +RASIL +KRKP D
Sbjct: 149 LYEAAQFSMAAFKKWRIGGPRMQRASILGRKRKPAD 184


>ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|222865254|gb|EEF02385.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/36 (75%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
 Frame = -2

Query: 294 LYEAARSSMTAFKKWRVGGPRFERASIL-KKRKPTD 190
           LYEAA+SSM AFKKWR+GGPR +RASIL +KRKP +
Sbjct: 149 LYEAAQSSMAAFKKWRMGGPRLQRASILGRKRKPAE 184


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