BLASTX nr result

ID: Cimicifuga21_contig00015466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015466
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]   380   e-103
ref|XP_002264685.1| PREDICTED: APO protein 1, chloroplastic [Vit...   380   e-103
ref|XP_004149527.1| PREDICTED: APO protein 1, chloroplastic-like...   341   2e-91
ref|XP_003548251.1| PREDICTED: APO protein 1, chloroplastic-like...   337   4e-90
ref|XP_003533257.1| PREDICTED: APO protein 1, chloroplastic-like...   334   2e-89

>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score =  380 bits (977), Expect = e-103
 Identities = 190/286 (66%), Positives = 222/286 (77%), Gaps = 2/286 (0%)
 Frame = +3

Query: 240  FQKIWHQQLQF--DGPTTSGTLLCVCGGYKWDHTTHRKELHSQNVDLPPILPRDXXXXXX 413
            F +I  QQ Q     P  SGT LCV    + D T  ++  + QNVDLPPILP+       
Sbjct: 527  FSQIEFQQGQILTGQPKISGTFLCVSQKPQEDATFKKQIAYPQNVDLPPILPKKKKKPYP 586

Query: 414  XXXXXXHQAARADKELAQKGIEKPLQPPKNGLLVPDLVPVAYEVLEAWKVLIKGIAQLLH 593
                   QAAR DK+LAQKGIEKPL+PPKNGL+VPDLVPVAYEVL+AWKVLIKG+AQLLH
Sbjct: 587  IPLKKIRQAARDDKKLAQKGIEKPLEPPKNGLIVPDLVPVAYEVLDAWKVLIKGLAQLLH 646

Query: 594  VIPVHGCSICSEVHVGKTGHEIQDCRGPGNGRRRSYHTWIKGSVNDVLLPIESYHLYDPF 773
            VIPVHGCS CSE+HV ++GH IQDC GP + +RR  H+W+KGS+NDVL+PIESYHLYDPF
Sbjct: 647  VIPVHGCSECSEIHVAQSGHHIQDCTGPSSVKRRGLHSWVKGSINDVLIPIESYHLYDPF 706

Query: 774  GRRIKHETRFDYDRIPAVVELCIQAGVNLHEYPSRRRKQPIRMMGKKVIDRGGFVEEPKP 953
            GRRIKHETRF YDRIPAVVELC+QAGV+L EYPSRRR  PIRM+GKKVIDRGGFVEEP+P
Sbjct: 707  GRRIKHETRFSYDRIPAVVELCVQAGVDLPEYPSRRRTIPIRMIGKKVIDRGGFVEEPEP 766

Query: 954  YCSEDSSSPLAELDTYGAHIQKIPPPTASDVTSIAQQTIKAHETVR 1091
            + S DSSS L ++DT+GA   + PPP  SD+  IAQ+TI A+E VR
Sbjct: 767  FHSSDSSSLLMDIDTHGA-FGRFPPPPLSDIPRIAQETIDAYEVVR 811



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 41/114 (35%), Positives = 63/114 (55%)
 Frame = +3

Query: 519  DLVPVAYEVLEAWKVLIKGIAQLLHVIPVHGCSICSEVHVGKTGHEIQDCRGPGNGRRRS 698
            D+  +A E ++A++V+  G+ +L+    V  C  CSEVHVG  GH  + C    +  R  
Sbjct: 795  DIPRIAQETIDAYEVVRWGVRKLMRKYTVKACGYCSEVHVGPWGHNAKLCGEFKHQWRDG 854

Query: 699  YHTWIKGSVNDVLLPIESYHLYDPFGRRIKHETRFDYDRIPAVVELCIQAGVNL 860
             H W   +V +V+ P   YHL DP G  ++   +  Y + PAVVE+C+QAG  +
Sbjct: 855  KHGWQDATVEEVIPPNYVYHLRDPKGPPLRSGLKRFYGKAPAVVEVCMQAGAQV 908


>ref|XP_002264685.1| PREDICTED: APO protein 1, chloroplastic [Vitis vinifera]
            gi|297734690|emb|CBI16741.3| unnamed protein product
            [Vitis vinifera]
          Length = 444

 Score =  380 bits (976), Expect = e-103
 Identities = 187/282 (66%), Positives = 219/282 (77%)
 Frame = +3

Query: 246  KIWHQQLQFDGPTTSGTLLCVCGGYKWDHTTHRKELHSQNVDLPPILPRDXXXXXXXXXX 425
            K    Q+    P  SGT LCV    + D T  ++  + QNVDLPPILP+           
Sbjct: 43   KFQQGQILTGQPKISGTFLCVSQKPQEDATFKKQIAYPQNVDLPPILPKKKKKPYPIPLK 102

Query: 426  XXHQAARADKELAQKGIEKPLQPPKNGLLVPDLVPVAYEVLEAWKVLIKGIAQLLHVIPV 605
               QAAR DK+LAQKGIEKPL+PPKNGL+VPDLVPVAYEVL+AWKVLIKG+AQLLHVIPV
Sbjct: 103  KIRQAARDDKKLAQKGIEKPLEPPKNGLIVPDLVPVAYEVLDAWKVLIKGLAQLLHVIPV 162

Query: 606  HGCSICSEVHVGKTGHEIQDCRGPGNGRRRSYHTWIKGSVNDVLLPIESYHLYDPFGRRI 785
            HGCS CSE+HV ++GH IQDC GP + +RR  H+W+KGS+NDVL+PIESYHLYDPFGRRI
Sbjct: 163  HGCSECSEIHVAQSGHHIQDCTGPSSVKRRGLHSWVKGSINDVLIPIESYHLYDPFGRRI 222

Query: 786  KHETRFDYDRIPAVVELCIQAGVNLHEYPSRRRKQPIRMMGKKVIDRGGFVEEPKPYCSE 965
            KHETRF YDRIPAVVELC+QAGV+L EYPSRRR  PIRM+GKKVIDRGGFVEEP+P+ S 
Sbjct: 223  KHETRFSYDRIPAVVELCVQAGVDLPEYPSRRRTIPIRMIGKKVIDRGGFVEEPEPFHSS 282

Query: 966  DSSSPLAELDTYGAHIQKIPPPTASDVTSIAQQTIKAHETVR 1091
            DSSS L ++DT+GA   + PPP  SD+  IAQ+TI A+E VR
Sbjct: 283  DSSSLLMDIDTHGA-FGRFPPPPLSDIPRIAQETIDAYEVVR 323



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 41/114 (35%), Positives = 63/114 (55%)
 Frame = +3

Query: 519 DLVPVAYEVLEAWKVLIKGIAQLLHVIPVHGCSICSEVHVGKTGHEIQDCRGPGNGRRRS 698
           D+  +A E ++A++V+  G+ +L+    V  C  CSEVHVG  GH  + C    +  R  
Sbjct: 307 DIPRIAQETIDAYEVVRWGVRKLMRKYTVKACGYCSEVHVGPWGHNAKLCGEFKHQWRDG 366

Query: 699 YHTWIKGSVNDVLLPIESYHLYDPFGRRIKHETRFDYDRIPAVVELCIQAGVNL 860
            H W   +V +V+ P   YHL DP G  ++   +  Y + PAVVE+C+QAG  +
Sbjct: 367 KHGWQDATVEEVIPPNYVYHLRDPKGPPLRSGLKRFYGKAPAVVEVCMQAGAQV 420


>ref|XP_004149527.1| PREDICTED: APO protein 1, chloroplastic-like [Cucumis sativus]
            gi|449505817|ref|XP_004162576.1| PREDICTED: APO protein
            1, chloroplastic-like [Cucumis sativus]
          Length = 443

 Score =  341 bits (875), Expect = 2e-91
 Identities = 171/282 (60%), Positives = 211/282 (74%)
 Frame = +3

Query: 246  KIWHQQLQFDGPTTSGTLLCVCGGYKWDHTTHRKELHSQNVDLPPILPRDXXXXXXXXXX 425
            K  H+ L    PT   TL      Y  +  + +++++ QNVDLP ILP+           
Sbjct: 43   KFAHKLLSQKVPTALRTLSYTSQEYGKEPVSKKQDMYRQNVDLPAILPKKKKKPYPIPIK 102

Query: 426  XXHQAARADKELAQKGIEKPLQPPKNGLLVPDLVPVAYEVLEAWKVLIKGIAQLLHVIPV 605
               +AARADKELAQ+GIEKPL+P KNGLLVPDL+PVA++V++AWK+LIKG++ LLHVIPV
Sbjct: 103  QIKRAARADKELAQRGIEKPLEPGKNGLLVPDLIPVAHQVMDAWKILIKGLSHLLHVIPV 162

Query: 606  HGCSICSEVHVGKTGHEIQDCRGPGNGRRRSYHTWIKGSVNDVLLPIESYHLYDPFGRRI 785
            + C  CSEVHV  +GH IQDC G  +  RRS+H+W+ GS+NDVL+PIESYHLYDPFGRRI
Sbjct: 163  YACRECSEVHVAHSGHHIQDCLGATSATRRSFHSWVTGSINDVLVPIESYHLYDPFGRRI 222

Query: 786  KHETRFDYDRIPAVVELCIQAGVNLHEYPSRRRKQPIRMMGKKVIDRGGFVEEPKPYCSE 965
            KHETRF+YDRIPAVVELCIQAGV++ EYPSRRR +PI+M+GKKVIDRGG +EEPKP+ S 
Sbjct: 223  KHETRFEYDRIPAVVELCIQAGVDIPEYPSRRRTKPIQMIGKKVIDRGGNMEEPKPWKSC 282

Query: 966  DSSSPLAELDTYGAHIQKIPPPTASDVTSIAQQTIKAHETVR 1091
            D S PL + DT GA  Q+  PP   DV  IAQ+TI A+ETVR
Sbjct: 283  D-SYPLLDFDTQGAP-QRFAPPLPEDVPRIAQETIAAYETVR 322



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
 Frame = +3

Query: 468 KGIEKPLQPPKNGLLVPDLVP-VAYEVLEAWKVLIKGIAQLLHVIPVHGCSICSEVHVGK 644
           +G  +   PP     +P+ VP +A E + A++ +  G+  L+    V  C  C EVHVG 
Sbjct: 293 QGAPQRFAPP-----LPEDVPRIAQETIAAYETVRYGVRMLMKKYTVKACGYCPEVHVGP 347

Query: 645 TGHEIQDCRGPGNGRRRSYHTWIKGSVNDVLLPIESYHLYDPFGRRIKHETRFDYDRIPA 824
            GH  + C    +  R   H W   ++++VL     +H+ DP G  +    +  Y + PA
Sbjct: 348 WGHNAKLCGEFKHQWRDGKHGWQDATLDEVLPRNYVWHVRDPKGPPLIGTLKRFYGKAPA 407

Query: 825 VVELCIQAGVNL 860
           VVE+CIQAG  +
Sbjct: 408 VVEVCIQAGATI 419


>ref|XP_003548251.1| PREDICTED: APO protein 1, chloroplastic-like [Glycine max]
          Length = 438

 Score =  337 bits (863), Expect = 4e-90
 Identities = 164/262 (62%), Positives = 201/262 (76%)
 Frame = +3

Query: 306  VCGGYKWDHTTHRKELHSQNVDLPPILPRDXXXXXXXXXXXXHQAARADKELAQKGIEKP 485
            VC   +   T  R++   QN DLPPILP++             QA R D++LA  GIEKP
Sbjct: 58   VCASRRPKGTVWRRKTLPQNEDLPPILPKNKKKPYPIPFKEIKQAGREDRKLAHMGIEKP 117

Query: 486  LQPPKNGLLVPDLVPVAYEVLEAWKVLIKGIAQLLHVIPVHGCSICSEVHVGKTGHEIQD 665
            L+PPKNGLLVPDLVPVAYEV +AWK+LI+G+AQLLHVIP HGCS CSEVHV +TGH I+D
Sbjct: 118  LEPPKNGLLVPDLVPVAYEVFDAWKLLIEGLAQLLHVIPAHGCSECSEVHVAQTGHHIRD 177

Query: 666  CRGPGNGRRRSYHTWIKGSVNDVLLPIESYHLYDPFGRRIKHETRFDYDRIPAVVELCIQ 845
            C G    +RRS H W+KGSVND+L+PIESYHL+DPFGRRIKH+TRF+YDRIPAVVELCIQ
Sbjct: 178  CSGTNGRQRRSSHAWVKGSVNDILVPIESYHLFDPFGRRIKHDTRFEYDRIPAVVELCIQ 237

Query: 846  AGVNLHEYPSRRRKQPIRMMGKKVIDRGGFVEEPKPYCSEDSSSPLAELDTYGAHIQKIP 1025
            AGV++ EYPSRRR  PIRM+G++VIDRGG +EEPKP+   D SS L + DTY A  ++ P
Sbjct: 238  AGVDIPEYPSRRRTNPIRMLGRRVIDRGGNLEEPKPWRFADPSS-LNDFDTYRAS-ERFP 295

Query: 1026 PPTASDVTSIAQQTIKAHETVR 1091
             P+ SD+  IAQ+T+ A+ETV+
Sbjct: 296  RPSLSDLPKIAQETMSAYETVK 317



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 41/116 (35%), Positives = 62/116 (53%)
 Frame = +3

Query: 519 DLVPVAYEVLEAWKVLIKGIAQLLHVIPVHGCSICSEVHVGKTGHEIQDCRGPGNGRRRS 698
           DL  +A E + A++ + KG+ +L+    V  C  C+EVHVG  GH  + C    +  R  
Sbjct: 301 DLPKIAQETMSAYETVKKGVKKLMRKYTVKACGYCTEVHVGPWGHNAKLCGAFKHQWRDG 360

Query: 699 YHTWIKGSVNDVLLPIESYHLYDPFGRRIKHETRFDYDRIPAVVELCIQAGVNLHE 866
            H W   +V++V  P   +H+ DP G  +    R  Y + PAVVE+C+QAG  + E
Sbjct: 361 KHGWQDATVDEVFPPNYVWHVRDPRGPPLASALRRYYGKAPAVVEVCMQAGAQIPE 416


>ref|XP_003533257.1| PREDICTED: APO protein 1, chloroplastic-like [Glycine max]
          Length = 438

 Score =  334 bits (857), Expect = 2e-89
 Identities = 162/262 (61%), Positives = 201/262 (76%)
 Frame = +3

Query: 306  VCGGYKWDHTTHRKELHSQNVDLPPILPRDXXXXXXXXXXXXHQAARADKELAQKGIEKP 485
            VC   +   T  R++   QN DLPPILP++             QA R D++LA  GIEKP
Sbjct: 58   VCASRRPKGTIWRRKTLQQNEDLPPILPKNKKKPYPIPFKEIKQAGREDRKLAHMGIEKP 117

Query: 486  LQPPKNGLLVPDLVPVAYEVLEAWKVLIKGIAQLLHVIPVHGCSICSEVHVGKTGHEIQD 665
            L+PPKNGLLVPDL+PVAYEV  AWK+LIKG+AQLLHVIPVHGCS C+EVHV +TGH I+D
Sbjct: 118  LEPPKNGLLVPDLIPVAYEVFGAWKLLIKGLAQLLHVIPVHGCSECTEVHVAQTGHHIRD 177

Query: 666  CRGPGNGRRRSYHTWIKGSVNDVLLPIESYHLYDPFGRRIKHETRFDYDRIPAVVELCIQ 845
            C G    +RRS H W+KGSVND+L+PIESYHL+DPFGRRIKH+TRF+YDRIPAVVELC+Q
Sbjct: 178  CSGTNGRQRRSSHAWVKGSVNDILVPIESYHLFDPFGRRIKHDTRFEYDRIPAVVELCVQ 237

Query: 846  AGVNLHEYPSRRRKQPIRMMGKKVIDRGGFVEEPKPYCSEDSSSPLAELDTYGAHIQKIP 1025
            AGV++ EYPSRRR  PIR++G++VIDRGG +EEPKP+   D SS L + DTY A  ++ P
Sbjct: 238  AGVDIPEYPSRRRTNPIRILGRRVIDRGGNLEEPKPWRFADPSS-LNDFDTYRAS-ERFP 295

Query: 1026 PPTASDVTSIAQQTIKAHETVR 1091
             P+ SD+  IAQ+T+ A+ETV+
Sbjct: 296  LPSLSDLPKIAQETMSAYETVK 317



 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 41/116 (35%), Positives = 62/116 (53%)
 Frame = +3

Query: 519 DLVPVAYEVLEAWKVLIKGIAQLLHVIPVHGCSICSEVHVGKTGHEIQDCRGPGNGRRRS 698
           DL  +A E + A++ + KG+ +L+    V  C  C+EVHVG  GH  + C    +  R  
Sbjct: 301 DLPKIAQETMSAYETVKKGVKKLMRKYTVKACGYCTEVHVGPWGHNAKLCGAFKHQWRDG 360

Query: 699 YHTWIKGSVNDVLLPIESYHLYDPFGRRIKHETRFDYDRIPAVVELCIQAGVNLHE 866
            H W   +V++V  P   +H+ DP G  +    R  Y + PAVVE+C+QAG  + E
Sbjct: 361 KHGWQDATVDEVFPPNYVWHVRDPRGPPLASALRRYYGKAPAVVEVCMQAGAQIPE 416


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