BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015443
         (1520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319944.1| f-box family protein [Populus trichocarpa] g...   155   3e-35
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   154   6e-35
ref|NP_191802.1| F-box protein [Arabidopsis thaliana] gi|7526448...   139   2e-30
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-30
ref|XP_003616471.1| F-box/LRR-repeat protein [Medicago truncatul...   137   8e-30

>ref|XP_002319944.1| f-box family protein [Populus trichocarpa]
            gi|222858320|gb|EEE95867.1| f-box family protein [Populus
            trichocarpa]
          Length = 511

 Score =  155 bits (391), Expect = 3e-35
 Identities = 144/491 (29%), Positives = 231/491 (47%), Gaps = 58/491 (11%)
 Frame = +1

Query: 67   DYISDLPDYVLHHVLSFLPIKEVIRTSFISRRWRDLWTSVPTLDF------NGLVFSPKI 228
            D ISDLPD +LHH+L  LP+K + +TS +S+RWR LW+S P LDF        +  + K+
Sbjct: 24   DRISDLPDAILHHILLLLPLKSIAQTSVLSQRWRSLWSSFPDLDFTTMNPSKAICSTRKL 83

Query: 229  EFK------NFVDSVLLRRDNCVIQKFSLTFGFYYCASHRVHGWILAAINHNVRELSLSS 390
            + K      +F+ +VL  RD     + +L F  +   SH ++G I  AI  NV+EL +  
Sbjct: 84   KSKRWWPSMDFIANVLALRDKHSDLR-ALRFRAHLSFSH-LNGLIRRAIRCNVQELDVEV 141

Query: 391  HAIGSFRLPDQIFTCRSIITLKLNLDHSTLN-LPSS---INLPFLKTLQLS-SLTFSDGN 555
                 F  P  + T  S+  LKL   +     LPSS   I  P L TL LS  + +   +
Sbjct: 142  ATGDYFNFPRGVITSESLRVLKLRSRYPGFRLLPSSVMTIGFPSLHTLSLSLVILYEQSS 201

Query: 556  LPQFF--SSCPMLEDVFIEDCCFG------------DLTV---FHIFSTSLKKLTIDGLR 684
            L   F  SS P L+++ + D CFG            DLT+   F + S  +    ++ LR
Sbjct: 202  LLDLFTESSFPCLKNLNL-DACFGMKHLKVCCRALEDLTIENCFQLHSLDICSAKLENLR 260

Query: 685  KYLSVYNATRQYEIKISTPKL--VSFEYKDYFTRNISLENLSSLRNASVDFDFFYMGGGR 858
                    + +   K++ P+L  +S+EY    T + SL NL+SL  ASV F   +     
Sbjct: 261  VASCFDAYSDKTWFKVNAPRLRGISWEYNS-ITASSSLVNLTSLHEASVGFSLLHENLSV 319

Query: 859  CDPHAINNFLRGLANTEILILSAATIKLLSANPSLLLVGLTFSKLKHLKLXXXXXXXXXX 1038
                ++ NFL GL++   L L +  +++LS    ++ +   F+ LK L+L          
Sbjct: 320  EKLQSVCNFLSGLSHVHSLTLDSQCVEILSNKNDIINLLHPFNNLKVLELHTGFEKNNVP 379

Query: 1039 XXTCFLRISPCVEFLTIQL-----SHCRPWWLDNNDVFEPQDYGGE-------------V 1164
                  R SP +  L +++     +  R W   N D+++      E             +
Sbjct: 380  GLAFLFRSSPTLHTLILKIINDFKTERRQW---NRDLWDLSTSAEEQYWESQLQALRPFL 436

Query: 1165 DFLKIVKIRGFRGGKQELAFVKYLLEHAWGLERMSIFYFS----ENSERQLKIIEEILTH 1332
            D LK+VKI GF   + E++  K+LL+H   L+ M++   +    ++S R+ K+  +I+  
Sbjct: 437  DHLKVVKIHGFLECENEVSLAKFLLKHGKDLQEMTLCTANCCNFKDSLRRQKVRSQIMGF 496

Query: 1333 RKVSMNCEIIF 1365
               S N +I+F
Sbjct: 497  SWASSNAKIVF 507


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  154 bits (389), Expect = 6e-35
 Identities = 137/457 (29%), Positives = 219/457 (47%), Gaps = 23/457 (5%)
 Frame = +1

Query: 61   SCDYISDLPDYVLHHVLSFLPIKEVIRTSFISRRWRDLWTSVPTLDFNG-LVFSPK---- 225
            S D IS+LPD +L H+LSFLP K  + TS +S+RWR LW SVP LDF+  L  +P     
Sbjct: 8    SRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVE 67

Query: 226  -----IEFKNFVDSVLLRRDNCVIQKFSLTFGFYYCASHRVHGWILAAINHNVRELSLSS 390
                 I F+NFVD VL   +   I+KF L  G+       V+ WI  A+   V+EL L  
Sbjct: 68   LEERIIMFQNFVDGVLRHSEVSCIKKFRL--GYRDNNLDSVYSWICIALERRVQELDLHL 125

Query: 391  HAIGSFRLPDQIFTCRSIITLKLNLDHSTLNLPSSINLPFLKTLQLSSLTFS-DGNLPQF 567
                   LP   F C++++ +KL+     L++P+++ LP LK L L S+ +S D ++ + 
Sbjct: 126  LIDWRVELPPMFFICKTLVVVKLSC-ALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKL 184

Query: 568  FSSCPMLEDVFIEDCCFGDLTVFHIFSTSLKKLTI----DGLRKYLSVYNATRQ-YEIKI 732
             S CP+LE++ IE     +  V ++ + SLK L I    DG   +   Y    Q Y++ +
Sbjct: 185  LSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDG---FAHPYEQEDQDYKVVV 241

Query: 733  STPKLVSFEYKDYFTRNISLENLSSLRNASVD-------FDFFYMGGGRCDPHAINNFLR 891
              P L      DY +++  +++L SL  A +D       F+     GG      I   L 
Sbjct: 242  DAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLG 301

Query: 892  GLANTEILILSAATIKLLSANPSLLLVGLTFSKLKHLKLXXXXXXXXXXXXTCFLRISPC 1071
             ++N + L L+  T+  LS       +  TF  +  L+               FL  SP 
Sbjct: 302  RISNVKCLSLTGVTLDSLSGTIGDYKLP-TFHNMTRLEFLFIGGFNWDFLPN-FLHSSPN 359

Query: 1072 VEFLTIQLSHCRPWWLDNNDVFEPQDYGGEVDFLKIVKIRGFRGGKQELAFVKYLLEHAW 1251
            +E L I+  +     +    +   Q     V  LK ++IR   G   EL  V+YLL++A 
Sbjct: 360  LEALVIETGYTNE-LIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAE 418

Query: 1252 GLERMSIFYFSENSERQLKIIEEILTHRKVSMNCEII 1362
             L++M+I       +++  + +++L   + S +C ++
Sbjct: 419  VLQQMTIDCHESYMDQEFCVCKKLLGLPRGSRSCFVV 455


>ref|NP_191802.1| F-box protein [Arabidopsis thaliana]
            gi|75264480|sp|Q9LZP7.1|FB216_ARATH RecName: Full=F-box
            protein At3g62430 gi|7340714|emb|CAB82957.1| putative
            protein [Arabidopsis thaliana]
            gi|332646831|gb|AEE80352.1| F-box protein [Arabidopsis
            thaliana]
          Length = 437

 Score =  139 bits (350), Expect = 2e-30
 Identities = 128/443 (28%), Positives = 213/443 (48%), Gaps = 12/443 (2%)
 Frame = +1

Query: 67   DYISDLPDYVLHHVLSFLPIKEVIRTSFISRRWRDLWTSVPTLDF-NGLVFSPKIEFKNF 243
            D IS+LPD V++ V+S L  KE     + S+ W +L T +P   F +    +    FK+F
Sbjct: 2    DRISNLPDGVIYRVISLLSTKEATCLKYTSKNWLNLVTIIPIAVFVDSSASAISASFKDF 61

Query: 244  VDSVLLRR-DNCVIQKFSLTFGFYYCASHR-VHGWILAAINHNVRELSLSSHAIGSFRLP 417
             D ++L R  +  I++FSL       A ++ V+  +   +   V +L L  +  G + LP
Sbjct: 62   ADRIMLARLASHRIRRFSLKLQSLNFAQYKTVNDCLRNVLECGVLDLELDINVRGDYSLP 121

Query: 418  DQIFTCRSIITLKLNLDHSTLNLPSSINLPFLKTLQLSSLTFSDGN-----LPQFFSSCP 582
             +IFTC+S++ +KL        LP +  LP LKTL L ++ F   N       +  S+CP
Sbjct: 122  SEIFTCKSVVKMKLGSGFVIDILPKNAWLPALKTLLLDTVRFEFDNTAGCSFTKLISACP 181

Query: 583  MLEDVFIE-DCCFGDLTVFHIFSTSLKKLTIDGLRKYLSVYNATRQYEIKISTPKLVSFE 759
            +LE++ I+   C        + S  LK+LTI   R+   V++ +    I +  P L  F+
Sbjct: 182  VLEELVIDGHNCEDWKWSRRVSSQILKRLTI---RRKEWVHDGSSFEPISLDIPSLEYFK 238

Query: 760  YKDYFTRNISLENLSSLRNASVDFDFFYMGGGRCDPHAINNFLRGLANTEILILSAA-TI 936
            Y D    +  +  L+SL  A ++    Y+G    D + + N ++GL N +IL L A  T+
Sbjct: 239  YFDTLRDSYPVVKLNSLVEAKLELPSLYIG----DTYNVRNLIKGLKNVQILRLGAVDTM 294

Query: 937  KLLSANPSLLLVGLTFSKLKHLKLXXXXXXXXXXXXTCFLRISPCVEFLTIQLSHCRPWW 1116
             L       + V   F  L HL +               L  SP ++ LTI+  H   + 
Sbjct: 295  HLFWVFREAVPV---FENLFHLSV-STHDAICWDDLRILLEKSPNLKTLTIEALHYHGYG 350

Query: 1117 LDNNDVFEPQD-YGGEVDF-LKIVKIRGFRGGKQELAFVKYLLEHAWGLERMSIFYFSEN 1290
             D N V E  D Y   +   ++I+KI  F G  +E+  V+Y+LE+   L  + I   ++ 
Sbjct: 351  -DENSVCECLDGYSFLLSCPIEILKITEFGGEIEEMEQVEYVLENLLCLVLLEIHVKTKK 409

Query: 1291 SERQLKIIEEILTHRKVSMNCEI 1359
             +R+L+I+ ++L   + S  C++
Sbjct: 410  IDRKLQILADLLMLPRASSKCKV 432


>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  138 bits (347), Expect = 4e-30
 Identities = 101/271 (37%), Positives = 141/271 (52%), Gaps = 12/271 (4%)
 Frame = +1

Query: 67  DYISDLPDYVLHHVLSFLPIKEVIRTSFISRRWRDLWTSVPTLDFNGLVFSPKI------ 228
           D IS LP+ +LHH+LSFL   +V++T  +S+RW ++W S P LDFN   FS  I      
Sbjct: 16  DRISTLPNVLLHHILSFLDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLISSYYYD 75

Query: 229 ----EFKNFVDSVLLRRDNCVIQKFSLTFGFYYCASHRVHGWILAAINHNVRELSL-SSH 393
                F +F+  VL+RR+N    K SL      C    V   I  A+ H+V E+S+ ++H
Sbjct: 76  DDMNNFTDFISHVLVRRNNVKAFKLSLDTR-RDCQYSVVESLIYYAVKHHVEEISINTAH 134

Query: 394 AIGSFRLPDQIFTCRSIITLKLNLDHSTLNLPSSINLPFLKTLQLSSLTFSDGNLPQFFS 573
                 LP   F C S+ +LKL +D   L LP S+ L  LKTL L      DG +   FS
Sbjct: 135 WDVPIVLPRCFFDCESLRSLKLKVD-GGLALPKSLGLQSLKTLHLGGAQNFDGKI---FS 190

Query: 574 SCPMLEDVFIEDCCFGDLTVFHIFSTSLKKLTIDGLRKYLSVYNATRQ-YEIKISTPKLV 750
           SCP LE++ IED C   +  F+I + SLK L I   R     YN  +Q  ++ +  PKL 
Sbjct: 191 SCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWR-----YNRIKQGCKVMLVAPKLT 245

Query: 751 SFEYKDYFTRNISLENLSSLRNASVDFDFFY 843
           SF++        S  NL+SL + +V    +Y
Sbjct: 246 SFKFYGNTPLFWSEVNLTSLDDVNVVLQRYY 276


>ref|XP_003616471.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355517806|gb|AES99429.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 459

 Score =  137 bits (345), Expect = 8e-30
 Identities = 126/447 (28%), Positives = 199/447 (44%), Gaps = 8/447 (1%)
 Frame = +1

Query: 67   DYISDLPDYVLHHVLSFLPIKEVIRTSFISRRWRDLWTSVPTLDFNGLV--FSPKIEFKN 240
            D IS LP+ V+ ++LSFLP K+ I TS +S RW  LWT    L F      F  K  F +
Sbjct: 33   DRISRLPNEVIAYILSFLPTKDAITTSVLSHRWISLWTFADALHFPNHCPSFLTKENFVD 92

Query: 241  FVDSVLLRRDNCVIQKFSLTFGFYYCASHRVHGWILAAINHNVRELSLSSHAIGSFRLPD 420
             ++SVL +R++  I++ S +        H V   +  A    V E+ LS + +  + LP 
Sbjct: 93   IMNSVLSQRESKCIKRLSFSILNNCYIPHLVSSIVSMATTQKVYEIDLSLYRLKVY-LPH 151

Query: 421  QIFTCRSIITLKLNLDHSTLNLPSSINLPFLKTLQLSSLTFSDGN----LPQFFSSCPML 588
            Q++TC+++  L+L +    LN+PS ++LP LK L L+ L F D +    L +F SSCP L
Sbjct: 152  QLYTCKTLTVLRL-VGTFHLNVPSHLHLPLLKILHLNLLCFVDDHDDDALMRFLSSCPAL 210

Query: 589  EDVFIEDCCFGDLTVFHIFSTSLKKLTIDGLRKYLSVYNATRQYEIKISTPKLVSFEYKD 768
            E +F E+  F   ++F I   SLK+L +    +            + I TP L     K+
Sbjct: 211  EQLFYEEVKFKRTSLFGICVPSLKRLFVRSFDE-----------RLHIKTPLLECLVMKE 259

Query: 769  YFTRNISLENLSSLRNASVDFDFFYMGGGRCDPHAINNFLRGLANTEILILSAATIKLLS 948
                N  +ENL +L+ A +   F Y    +     I N   G+  T  L L   T ++L+
Sbjct: 260  TKAINYVVENLDNLKEAHIGIHFDY--ENKKVKENIANIFNGVRKTRFLCLDLYTTEVLT 317

Query: 949  ANPSLLLVGLTFSKLKHLKLXXXXXXXXXXXXTCFLRISPCVEFLTIQLSHCRPWWLDNN 1128
                  L   TF  L HL+L              +L+I      + + L  C        
Sbjct: 318  ---YACLEFPTFDHLGHLQL--------------YLKILDSYFLVELLLEKC-------- 352

Query: 1129 DVFEPQDYGGEVDFLKIVKIRGFRGGKQELAFVKYLLEHAWGLERMSIFYFS--ENSERQ 1302
                       ++FL+I+K+        E+ + +  +  +     ++ F F   E ++ +
Sbjct: 353  ---------PNLEFLEIIKVDEL--CDNEIEWRQPTIVPSCLSSHLTTFIFRDYEGTDEE 401

Query: 1303 LKIIEEILTHRKVSMNCEIIFEPVHWN 1383
             ++I  IL   KV     I FE   WN
Sbjct: 402  FELISYILNSGKVLKRTTIYFESSCWN 428