BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015442
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]   270   5e-70
ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...   254   3e-65
ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selag...   118   2e-24
ref|XP_003620268.1| Pentatricopeptide repeat-containing protein ...   117   5e-24
emb|CBI26377.3| unnamed protein product [Vitis vinifera]              116   7e-24

>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  270 bits (689), Expect = 5e-70
 Identities = 139/260 (53%), Positives = 183/260 (70%), Gaps = 3/260 (1%)
 Frame = +2

Query: 2    FEWDAGKPDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGK 181
            FEW    PD++SFNT++SAACK  +SSMIRR++YRME+E +KLNVV ST L+QYFC  GK
Sbjct: 459  FEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGK 518

Query: 182  LTESFKLFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRK---TTICPDTTSYNI 352
            ++E  +L ESMI NG +PT V+ N+            TA+RIFR+   T   P+TTSYNI
Sbjct: 519  ISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNI 578

Query: 353  LINAYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDG 532
            LI+A +REGN  +VEQL+ DM+S  LKPD V + SFI  LCKEGKIS A+ L D+M + G
Sbjct: 579  LIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESG 638

Query: 533  VHPGIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLKGSMKRFPV 712
            + P +  YN IL AM +RGK  DI+ LLKDM ++GCEP+A +++IL +A  K  MKRFP 
Sbjct: 639  LTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEILKQAMSKCWMKRFPE 698

Query: 713  VTKAIELILSNNYTRETQLE 772
            V+K +E ++  N  +ETQ E
Sbjct: 699  VSKQLEFVICGNCEKETQTE 718



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 7/234 (2%)
 Frame = +2

Query: 23   PDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKL 202
            PD++++N ++           I  ++  ++ + I  +     +L     K G++  + KL
Sbjct: 326  PDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRGQVRVANKL 385

Query: 203  FESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTT---ICPDTTSYNILINAYLR 373
               +IS G +      N+             A  + +      + P   SYN ++N + R
Sbjct: 386  LLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCR 445

Query: 374  EGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFA 553
            E +     QL       N  PDVV F + + + CK+G  S    +L  M  +GV   + +
Sbjct: 446  ENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVS 505

Query: 554  YNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYT----LDILCKAKLKGSMKR 703
               ++   C  GK+ + + LL+ M+ NG  P   T    LD LCK  L G+  R
Sbjct: 506  STCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHR 559



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
 Frame = +2

Query: 146 TSLLQYFCK---TGKLTESFKLFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRK 316
           TSLL+   K    G L +S  +FE M+     PT  +LN+             A+ +FR 
Sbjct: 154 TSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRV 213

Query: 317 TT---ICPDTTSYNILINAYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGK 487
                      SYN ++ A  + G  +    L+  +       +   + + +    KEG 
Sbjct: 214 LLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGL 273

Query: 488 ISSALHLLDEMWKDGVHPGIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDI 667
              A  +LDEM  DG  P +  Y +I+  +C  G++ D + +L  M   GC+PD  T ++
Sbjct: 274 WEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNV 333

Query: 668 LCK 676
           + +
Sbjct: 334 ILR 336



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 9/251 (3%)
 Frame = +2

Query: 29  LISFNTMMSAACKWR------DSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTE 190
           L SF +++    KW       DS  +   + R+E+   +  +     L+    K G   E
Sbjct: 150 LPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTL---NLLISMLSKAGMARE 206

Query: 191 SFKLFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIF---RKTTICPDTTSYNILIN 361
           +  +F  ++  G      S N             TA  +    +K     +  SY  L+ 
Sbjct: 207 AHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVY 266

Query: 362 AYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHP 541
            + +EG       ++ +M     KP+V+ +   +  LC EG+I  AL +L +M K+G  P
Sbjct: 267 GFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDP 326

Query: 542 GIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLKGSMKRFPVVTK 721
            I  YN+IL  +  + +  +I  LL+ +      PD++T   L    LK    R  V  K
Sbjct: 327 DIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRGQVR--VANK 384

Query: 722 AIELILSNNYT 754
            +  ++S   T
Sbjct: 385 LLLYVISAGCT 395


>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
            mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  254 bits (648), Expect = 3e-65
 Identities = 132/239 (55%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
 Frame = +2

Query: 2    FEWDAGKPDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGK 181
            FEW    PD++SFNT++SAACK  +SSMIRR++YRME+E +KLNVV ST L+QYFC  GK
Sbjct: 351  FEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIGK 410

Query: 182  LTESFKLFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRK---TTICPDTTSYNI 352
            ++E  +L ESMI NG +PT V+ N+            TA+RIFR+   T   P+TTSYNI
Sbjct: 411  ISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTGYFPNTTSYNI 470

Query: 353  LINAYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDG 532
            LI+A +REGN  +VEQL+ DM+S  LKPD V + SFI  LCKEGKIS A+ L D+M + G
Sbjct: 471  LIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEGKISVAIQLRDQMLESG 530

Query: 533  VHPGIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLKGSMKRFP 709
            + P I  YN IL AM +RGK  DI+ LLKDM ++GCEP+A +++IL +A  K  MKRFP
Sbjct: 531  LTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVSIEILKQAMSKCWMKRFP 589



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 7/234 (2%)
 Frame = +2

Query: 23  PDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKL 202
           PD++++N ++           I  ++  ++ + I  +     +L     K  ++  + KL
Sbjct: 218 PDIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRDQVRVANKL 277

Query: 203 FESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTT---ICPDTTSYNILINAYLR 373
              +IS G +      N+             A  + +      + P   SYN ++N + R
Sbjct: 278 LLYVISAGCTVDVAVYNIYFHCLCRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCR 337

Query: 374 EGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFA 553
           E +     QL       N  PDVV F + + + CK+G  S    +L  M  +GV   + +
Sbjct: 338 ENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVS 397

Query: 554 YNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYT----LDILCKAKLKGSMKR 703
              ++   C  GK+ + + LL+ M+ NG  P   T    LD LCK  L G+  R
Sbjct: 398 STCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHR 451



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
 Frame = +2

Query: 146 TSLLQYFCK---TGKLTESFKLFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRK 316
           TSLL+   K    G L +S  +FE M+     PT  +LN+             A+ +FR 
Sbjct: 46  TSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTLNLLISMLSKAGMAREAHFVFRV 105

Query: 317 TT---ICPDTTSYNILINAYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGK 487
                      SYN ++ A  + G  +    L+  +       +   + + +    KEG 
Sbjct: 106 LLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGL 165

Query: 488 ISSALHLLDEMWKDGVHPGIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDI 667
              A  +LDEM  DG  P +  Y +I+  +C  G++ D + +L  M   GC+PD  T ++
Sbjct: 166 WEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNV 225

Query: 668 LCK 676
           + +
Sbjct: 226 ILR 228



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 9/251 (3%)
 Frame = +2

Query: 29  LISFNTMMSAACKWR------DSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTE 190
           L SF +++    KW       DS  +   + R+E+   +  +     L+    K G   E
Sbjct: 42  LPSFTSLLKILKKWLGLGSLVDSMSVFEFMLRLEYFPTEPTL---NLLISMLSKAGMARE 98

Query: 191 SFKLFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIF---RKTTICPDTTSYNILIN 361
           +  +F  ++  G      S N             TA  +    +K     +  SY  L+ 
Sbjct: 99  AHFVFRVLLGKGCLKCAHSYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVY 158

Query: 362 AYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHP 541
            + +EG       ++ +M     KP+V+ +   +  LC EG+I  AL +L +M K+G  P
Sbjct: 159 GFSKEGLWEEAFCMLDEMKIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDP 218

Query: 542 GIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLKGSMKRFPVVTK 721
            I  YN+IL  +  + +  +I  LL+ +      PD++T   L    LK    R  V  K
Sbjct: 219 DIVTYNVILRELFHQDRYVEIGELLQVIDQKEISPDSFTYAALTGGLLKRDQVR--VANK 276

Query: 722 AIELILSNNYT 754
            +  ++S   T
Sbjct: 277 LLLYVISAGCT 287


>ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
           gi|300160021|gb|EFJ26640.1| hypothetical protein
           SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  118 bits (296), Expect = 2e-24
 Identities = 61/227 (26%), Positives = 118/227 (51%), Gaps = 3/227 (1%)
 Frame = +2

Query: 23  PDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKL 202
           P+++++N +++  CK         ++  M  + +  +V+  + L+  FCK  ++ E+ +L
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 315

Query: 203 FESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKT---TICPDTTSYNILINAYLR 373
              M S G +P  V+ N              A++I  +     + PD  ++NILI    +
Sbjct: 316 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACK 375

Query: 374 EGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFA 553
            GN      L  +M ++N++PDV+ F + I  LCK G++ +A  +LD M   GV P +  
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 435

Query: 554 YNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLKGS 694
           YN++++ +C+ G++++    L++MV +GC P++ T   L  A  + S
Sbjct: 436 YNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRAS 482



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
 Frame = +2

Query: 23  PDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKL 202
           PD++++NT++ + CK  D    RR+   M       NVV  + L+   CK G++ E+ +L
Sbjct: 114 PDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEAREL 173

Query: 203 FESMISNGPS--PTTVSLNVXXXXXXXXXXXXTAYRIFRKTT-----ICPDTTSYNILIN 361
            + M        P  ++ N              A  + R        + PDT +++ LI+
Sbjct: 174 IQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLID 233

Query: 362 AYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHP 541
              + G     E    DM +    P+VV + + +  LCK  K+  A  +++ M   GV P
Sbjct: 234 GLCKCGQ--TDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTP 291

Query: 542 GIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYT----LDILCKAKLKG 691
            +  Y++++ A C+  ++ + + LL  M   GC P+  T    +D LCK+   G
Sbjct: 292 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 7/249 (2%)
 Frame = +2

Query: 11  DAGKPDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTE 190
           D   P ++++NT+++  CK  +      +   +       +VV   +L+   CK G L E
Sbjct: 75  DGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEE 134

Query: 191 SFKLFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTT-----ICPDTTSYNIL 355
           + +L   M S G  P  V+ +V             A  + ++ T     + P+  +YN  
Sbjct: 135 ARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSF 194

Query: 356 INAYLREGNHFVVEQLIADMHSRNLK--PDVVKFRSFICSLCKEGKISSALHLLDEMWKD 529
           ++   ++       +L+  +   +L+  PD V F + I  LCK G+   A +  D+M   
Sbjct: 195 LDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAG 252

Query: 530 GVHPGIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLKGSMKRFP 709
           G  P +  YN ++  +C+  K++    +++ MV  G  PD  T  +L  A  K S     
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR---- 308

Query: 710 VVTKAIELI 736
            V +A+EL+
Sbjct: 309 -VDEALELL 316



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 3/215 (1%)
 Frame = +2

Query: 23  PDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKL 202
           P++++FN+++   CK   S    +I  ++    +  + V    L+   CK G   ++  L
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASAL 385

Query: 203 FESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFR---KTTICPDTTSYNILINAYLR 373
           FE M++    P  ++                A  I        + P+  +YN+L++   +
Sbjct: 386 FEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCK 445

Query: 374 EGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFA 553
            G      + + +M S    P+ + + S + +LC+  +   AL L+ ++   G  P    
Sbjct: 446 SGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVT 505

Query: 554 YNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYT 658
           YNI++  + + GK +  I +L++MV  G +PD++T
Sbjct: 506 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 540



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 3/215 (1%)
 Frame = +2

Query: 23   PDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKL 202
            PD ++FN +++ ACK  +      +   M  +N++ +V+   +L+   CK G++  +  +
Sbjct: 361  PDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDI 420

Query: 203  FESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTT---ICPDTTSYNILINAYLR 373
             + M + G  P  V+ NV                   +       P++ +Y  L+ A  R
Sbjct: 421  LDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCR 480

Query: 374  EGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFA 553
                    QL++ + S    PD V +   +  L K GK   A+ +L+EM   G  P  F 
Sbjct: 481  ASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 540

Query: 554  YNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYT 658
            +      + R G L   + LL+ ++  G  PDA T
Sbjct: 541  FAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575



 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
 Frame = +2

Query: 296 AYRIFR----KTTICPDTTSYNILINAYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFI 463
           A  IFR    +  + P   +YN +IN   +        +L  ++  R   PDVV + + I
Sbjct: 64  ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLI 123

Query: 464 CSLCKEGKISSALHLLDEMWKDGVHPGIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCE 643
            SLCK G +  A  L   M   G  P +  Y++++  +C+ G++ +   L+++M    C+
Sbjct: 124 DSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCD 183

Query: 644 --PDAYT----LDILCKAKL 685
             P+  T    LD LCK  +
Sbjct: 184 VLPNIITYNSFLDGLCKQSM 203



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = +2

Query: 344 YNILINAYLREGNHF-VVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEM 520
           YNI++ +  R G     +E    +M    + P +V + + I  LCK  ++ + + L +E+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 521 WKDGVHPGIFAYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLK 688
            K G HP +  YN ++ ++C+ G L++   L   M   GC P+  T  +L     K
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163


>ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495283|gb|AES76486.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  117 bits (292), Expect = 5e-24
 Identities = 77/236 (32%), Positives = 115/236 (48%), Gaps = 8/236 (3%)
 Frame = +2

Query: 23  PDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKL 202
           PD+++++ ++S  C     +    +  +M  ENIK +V     L+  FCK GK+ E   +
Sbjct: 258 PDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317

Query: 203 FESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTT---ICPDTTSYNILINAYLR 373
           F+ M+  G  P  V+ N              A  IF       + PD  SY+I+IN + +
Sbjct: 318 FDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377

Query: 374 EGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFA 553
                    L  +MH +N+ PDVV + S I  L K G+IS AL L+D+M   GV P I  
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRT 437

Query: 554 YNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCK-----AKLKGSMKRF 706
           YN IL A+C+  ++   I LL  +   G +P+ YT  IL K      KL+ + K F
Sbjct: 438 YNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVF 493



 Score =  101 bits (252), Expect = 2e-19
 Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 5/221 (2%)
 Frame = +2

Query: 20  KPDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFK 199
           KPD+ +FN +++A CK       + +   M  + IK N V   SL+  +C   ++ ++  
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351

Query: 200 LFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFR---KTTICPDTTSYNILINAYL 370
           +F +M   G +P   S ++             A  +F+   +  I PD  +Y+ LI+   
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLS 411

Query: 371 REGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIF 550
           + G      QL+  MH R + P +  + S + +LCK  ++  A+ LL ++   G+ P ++
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMY 471

Query: 551 AYNIILYAMCRRGKLQDIIFLLKDMVING--CEPDAYTLDI 667
            Y+I++  +C+ GKL+D   + + +++ G     D YT+ I
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMI 512



 Score =  101 bits (251), Expect = 3e-19
 Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 4/230 (1%)
 Frame = +2

Query: 23  PDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKL 202
           P    FN ++ +  K +    +  +  +MEF  IK N+V    L+  FC+ G +  +F +
Sbjct: 83  PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142

Query: 203 FESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTTICP---DTTSYNILINAYLR 373
           F  ++  G  P T++                A+    K        D  SY  LI+   +
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202

Query: 374 EGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFA 553
            G       L+  +    ++P+VV + + I S+CK   ++ A  L  EM   G+ P +  
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262

Query: 554 YNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLK-GSMK 700
           Y+ ++   C  GKL D I L   M++   +PD YT +IL  A  K G MK
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312



 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 4/223 (1%)
 Frame = +2

Query: 26  DLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKLF 205
           D IS+ T++   CK  ++     ++ R++   ++ NVV   +++   CK   + E+F LF
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 206 ESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTTICPDTTSYNILINAYLREGNH 385
             MIS G                                I PD  +Y+ LI+ +   G  
Sbjct: 249 SEMISKG--------------------------------ISPDVVTYSALISGFCILGKL 276

Query: 386 FVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFAYNII 565
                L   M   N+KPDV  F   + + CK+GK+     + D M K G+ P    YN +
Sbjct: 277 NDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336

Query: 566 LYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDIL----CKAK 682
           +   C   ++     +   M   G  PD  +  I+    CK K
Sbjct: 337 MDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIK 379


>emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  116 bits (291), Expect = 7e-24
 Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 3/226 (1%)
 Frame = +2

Query: 20  KPDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFK 199
           +PD++++NT+M+  C         ++   +    IKLNV     L+  +CK  K+ E+F+
Sbjct: 283 EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFR 342

Query: 200 LFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTTICPD---TTSYNILINAYL 370
           LFE M   G  P+TV+ N             TA ++F +   C      ++Y +L++   
Sbjct: 343 LFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLC 402

Query: 371 REGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIF 550
           + G+      L   +     KP++  F   +  +C+ GK+  A    DE+ K+G+ P   
Sbjct: 403 KNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTI 462

Query: 551 AYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLK 688
           AYNI++  +C +G L + + LL  M   GC PD+ T +++ +  LK
Sbjct: 463 AYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 508



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 3/224 (1%)
 Frame = +2

Query: 26  DLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFKLF 205
           D  ++  +++  CK R + +  ++  +M+  N K +V     ++   CK G  TE+  +F
Sbjct: 111 DAKTYGILINGLCKARKTGLAIKLHEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMF 169

Query: 206 ESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYRIFRKTT---ICPDTTSYNILINAYLRE 376
             MI  G  P  V  +              A   F++     I  D  +YN LI+   R 
Sbjct: 170 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 229

Query: 377 GNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIFAY 556
           G    V   +  M  R   PD   F   I  LCKEGK+  A  +L+ M   G  P I  Y
Sbjct: 230 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTY 289

Query: 557 NIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKAKLK 688
           N ++  +C  G+L+D   L + +   G + + ++ +IL     K
Sbjct: 290 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 51/223 (22%), Positives = 102/223 (45%), Gaps = 3/223 (1%)
 Frame = +2

Query: 20  KPDLISFNTMMSAACKWRDSSMIRRIVYRMEFENIKLNVVGSTSLLQYFCKTGKLTESFK 199
           K D+ ++  ++ + CK   ++    +   M    I  +VV  +SL+   C+ G+L E+ +
Sbjct: 143 KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 202

Query: 200 LFESMISNGPSPTTVSLN--VXXXXXXXXXXXXTAY-RIFRKTTICPDTTSYNILINAYL 370
            F+ M   G S    + N  +            T +  +       PD  ++ ILI+   
Sbjct: 203 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 262

Query: 371 REGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLCKEGKISSALHLLDEMWKDGVHPGIF 550
           +EG     +Q++  MH +  +PD++ + + +  LC  G++  A  L + +   G+   +F
Sbjct: 263 KEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 322

Query: 551 AYNIILYAMCRRGKLQDIIFLLKDMVINGCEPDAYTLDILCKA 679
           +YNI++   C+  K+ +   L ++M   G +P   T + L  A
Sbjct: 323 SYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGA 365



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
 Frame = +2

Query: 125 KLNVVGSTSLLQYFCKTGKLTESFKLFESMISNGPSPTTVSLNVXXXXXXXXXXXXTAYR 304
           K N+   + LL   C+ GKL E++K F+ +  NG  P T++ N+             A +
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 482

Query: 305 IF---RKTTICPDTTSYNILINAYLREGNHFVVEQLIADMHSRNLKPDVVKFRSFICSLC 475
           +     +    PD+ ++N++I   L+E       QL+ +M +RN  PD       +C   
Sbjct: 483 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLAS 542

Query: 476 KEGKISSALHLLDEMWKDGV 535
            + +  +AL  L    + GV
Sbjct: 543 FDPQWHAALVSLPNALQKGV 562