BLASTX nr result

ID: Cimicifuga21_contig00015439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015439
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    57   7e-06
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...    57   7e-06

>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
 Frame = +2

Query: 59   EDLWM*KDPAGKT--PFPMEQLRKWYKSGFFPVALRVWRQSASKVEAEFLLVILCGSQS- 229
            E +W  +DP+GK   PF M QLRKW  +G+FP  LR+WR S  + ++  L  +L G  S 
Sbjct: 892  EKIWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISK 951

Query: 230  GLKSTSNGL-VAIGSTVEISRGEGERVGAAIRG 325
                TSN L V   S+  + R +G  + + + G
Sbjct: 952  DTPLTSNSLQVHPNSSPFVGRPQGGTLQSGVDG 984


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
 Frame = +2

Query: 59   EDLWM*KDPAGKT--PFPMEQLRKWYKSGFFPVALRVWRQSASKVEAEFLLVILCGSQS- 229
            E +W  +DP+GK   PF M QLRKW  +G+FP  LR+WR S  + ++  L  +L G  S 
Sbjct: 892  EKIWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISK 951

Query: 230  GLKSTSNGL-VAIGSTVEISRGEGERVGAAIRG 325
                TSN L V   S+  + R +G  + + + G
Sbjct: 952  DTPLTSNSLQVHPNSSPFVGRPQGGTLQSGVDG 984


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