BLASTX nr result

ID: Cimicifuga21_contig00015438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015438
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    87   4e-15
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    80   5e-13
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    74   2e-11
gb|ACU18186.1| unknown [Glycine max]                                   74   2e-11

>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 45/111 (40%), Positives = 62/111 (55%)
 Frame = -3

Query: 487 NFVDLIRFRSVCKSWGSISLKKSRNPTLQLPWLFLSSDDETIETPRCHFFSISDNRVYSF 308
           N+VD I  R+VCKSW S   KK  +   QLPWL L             F++++D + Y  
Sbjct: 21  NYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKNNPN--HRGFYNLADGKTYHL 78

Query: 307 PLSESLRNCCCRASHGWLFMVDNLINSSLFNPLTGVRLPLPSIRSFLQFIT 155
            L E++   CC +SHGWL MV++  +  L NPLT  R+ LPS+ +F  F T
Sbjct: 79  ELPETIEKRCCGSSHGWLVMVEDTPSIFLLNPLTKARIELPSLSTFPYFPT 129


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 45/111 (40%), Positives = 62/111 (55%)
 Frame = -3

Query: 487 NFVDLIRFRSVCKSWGSISLKKSRNPTLQLPWLFLSSDDETIETPRCHFFSISDNRVYSF 308
           N+VD I  R+VCKSW S   KK  +   +LPWL L    +        F++ SD + Y  
Sbjct: 21  NYVDYISTRAVCKSWWSAIPKKPHDLLCRLPWLLLPHHKDNPN--HRGFYNPSDGKTYHL 78

Query: 307 PLSESLRNCCCRASHGWLFMVDNLINSSLFNPLTGVRLPLPSIRSFLQFIT 155
            L E++   CC +SHGWL MV++  +  L NPLT  R+ LPS+ +F  F T
Sbjct: 79  ELPETVDKRCCGSSHGWLVMVEDTPSIFLLNPLTKSRIELPSLSTFPNFPT 129


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = -3

Query: 487 NFVDLIRFRSVCKSWGSISLKKSRNPTL-QLPWLFLSSDDETIETPRCHFFSISDNRVYS 311
           N+VD +  R+VC SW S   K+  N  L QLP+L L       +  R  F++ISD+++Y 
Sbjct: 22  NYVDYLVTRAVCGSWQSAIAKRPHNHLLCQLPFLLLPYYQNNPD--RRGFYNISDDKIYV 79

Query: 310 FPLSESLRNCCCRASHGWLFMVDNLINSSLFNPLTGVRLPLPSIRSFLQFIT 155
             L E+    CC +SHGWL MV++  +  L NPLT  R+ LP++ +F  F T
Sbjct: 80  LELPEAYEKRCCGSSHGWLIMVEDSPSIFLLNPLTRERIELPALSTFSIFPT 131


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/105 (40%), Positives = 54/105 (51%)
 Frame = -3

Query: 484 FVDLIRFRSVCKSWGSISLKKSRNPTLQLPWLFLSSDDETIETPRCHFFSISDNRVYSFP 305
           +VD +RFRSVC+SW S   K   +   QLPWL LS         R  FF +S N+ +   
Sbjct: 23  YVDYLRFRSVCRSWRSSVPKIPLHLPPQLPWLMLS---------RRAFFDLSLNKTHLLN 73

Query: 304 LSESLRNCCCRASHGWLFMVDNLINSSLFNPLTGVRLPLPSIRSF 170
              S R   C +SHGWL M+D      L NPLT    PLP + +F
Sbjct: 74  PQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLPPLHAF 118


>gb|ACU18186.1| unknown [Glycine max]
          Length = 226

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/105 (40%), Positives = 54/105 (51%)
 Frame = -3

Query: 484 FVDLIRFRSVCKSWGSISLKKSRNPTLQLPWLFLSSDDETIETPRCHFFSISDNRVYSFP 305
           +VD +RFRSVC+SW S   K   +   QLPWL LS         R  FF +S N+ +   
Sbjct: 23  YVDYLRFRSVCRSWRSSVPKIPLHLPPQLPWLMLS---------RRAFFDLSLNKTHLLN 73

Query: 304 LSESLRNCCCRASHGWLFMVDNLINSSLFNPLTGVRLPLPSIRSF 170
              S R   C +SHGWL M+D      L NPLT    PLP + +F
Sbjct: 74  PQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLPPLHAF 118


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