BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015431
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   531   e-148
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]   531   e-148
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...   530   e-148
ref|XP_002305447.1| chromatin remodeling complex subunit [Populu...   523   e-146
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...   519   e-145

>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 903

 Score =  531 bits (1368), Expect = e-148
 Identities = 265/393 (67%), Positives = 323/393 (82%), Gaps = 5/393 (1%)
 Frame = -3

Query: 1459 TDILHSLEKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDASKAIKRRVMSRGYI 1280
            TD+L+SL KVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+A+ +R+MS+  I
Sbjct: 511  TDVLYSLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDI 570

Query: 1279 --VRKQIKAGADTAFFDVVEETLQNDENSKTKVAVIQDLREMTRNVLHYYKGDFLDELPG 1106
              VRKQ+K+ A  AF+D+VE TLQ D+N + K+ VIQDLREMT  VLHYYKGDFLDELPG
Sbjct: 571  MGVRKQLKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPG 630

Query: 1105 LVDLTVLLNLSSKQKFIVEKLNKYE-KFKRTSILTAVYVHPLLKEVSENATMSDKACNFN 929
            LVD TVLLNLS++QK  V  LNK+E KFK+ S+ +AVY+HP LK  +E    ++   +  
Sbjct: 631  LVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEM 690

Query: 928  --EDKMNDLISKMDFRDGAKTKFFLNMLGLCESSGEKLLVFSQYLLPLKVLERLVVNTKG 755
              + KM++++ ++D RDG K KFFLN+L LC+SSGEKLLVFSQYLLPL+ LE+L +  KG
Sbjct: 691  TCQKKMDEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKG 750

Query: 754  WSVGKEIFMINGDTTQDDREWSMERFNTSPDAKVFFGSIKACGEGISLVGASRILIMDVH 575
            WS GKEIF I+G+++ + REWSMERFNTSPDA+VFFGSIKACGEGISLVGASR+LI+DVH
Sbjct: 751  WSPGKEIFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVH 810

Query: 574  LNPSVTRQAIGRAFRPGQVRKVYVYRLVAADSPEEENHKTSFRKELISKMWFEWSEYCSD 395
            LNPSVTRQAIGRAFRPGQ +KV+VY+LVAADSPEEE+H + F+KELISKMWFEW+EYC  
Sbjct: 811  LNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKMWFEWNEYCGH 870

Query: 394  SNFEMETIDFKDIADEFWESPSLREDVNVLKKR 296
              FE ET+D  D  D F ESP LRED+ VL +R
Sbjct: 871  HEFEAETVDVSDSGDLFLESPLLREDITVLYRR 903


>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score =  531 bits (1368), Expect = e-148
 Identities = 265/393 (67%), Positives = 323/393 (82%), Gaps = 5/393 (1%)
 Frame = -3

Query: 1459 TDILHSLEKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDASKAIKRRVMSRGYI 1280
            TD+L+SL KVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+A+ +R+MS+  I
Sbjct: 737  TDVLYSLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDI 796

Query: 1279 --VRKQIKAGADTAFFDVVEETLQNDENSKTKVAVIQDLREMTRNVLHYYKGDFLDELPG 1106
              VRKQ+K+ A  AF+D+VE TLQ D+N + K+ VIQDLREMT  VLHYYKGDFLDELPG
Sbjct: 797  MGVRKQLKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPG 856

Query: 1105 LVDLTVLLNLSSKQKFIVEKLNKYE-KFKRTSILTAVYVHPLLKEVSENATMSDKACNFN 929
            LVD TVLLNLS++QK  V  LNK+E KFK+ S+ +AVY+HP LK  +E    ++   +  
Sbjct: 857  LVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEM 916

Query: 928  --EDKMNDLISKMDFRDGAKTKFFLNMLGLCESSGEKLLVFSQYLLPLKVLERLVVNTKG 755
              + KM++++ ++D RDG K KFFLN+L LC+SSGEKLLVFSQYLLPL+ LE+L +  KG
Sbjct: 917  TCQKKMDEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKG 976

Query: 754  WSVGKEIFMINGDTTQDDREWSMERFNTSPDAKVFFGSIKACGEGISLVGASRILIMDVH 575
            WS GKEIF I+G+++ + REWSMERFNTSPDA+VFFGSIKACGEGISLVGASR+LI+DVH
Sbjct: 977  WSPGKEIFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVH 1036

Query: 574  LNPSVTRQAIGRAFRPGQVRKVYVYRLVAADSPEEENHKTSFRKELISKMWFEWSEYCSD 395
            LNPSVTRQAIGRAFRPGQ +KV+VY+LVAADSPEEE+H + F+KELISKMWFEW+EYC  
Sbjct: 1037 LNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKMWFEWNEYCGH 1096

Query: 394  SNFEMETIDFKDIADEFWESPSLREDVNVLKKR 296
              FE ET+D  D  D F ESP LRED+ VL +R
Sbjct: 1097 HEFEAETVDVSDSGDIFLESPLLREDIKVLYRR 1129


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 944

 Score =  530 bits (1365), Expect = e-148
 Identities = 265/393 (67%), Positives = 324/393 (82%), Gaps = 5/393 (1%)
 Frame = -3

Query: 1459 TDILHSLEKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDASKAIKRRVMSRGYI 1280
            TD+L+SL KVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+AI +R+MS+  I
Sbjct: 552  TDVLYSLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAIVKRIMSKVDI 611

Query: 1279 --VRKQIKAGADTAFFDVVEETLQNDENSKTKVAVIQDLREMTRNVLHYYKGDFLDELPG 1106
              VRKQ+K+ A  AF+D+VE TLQ D+N + K+ VIQDLREMT  VLHYYKGDFLDELPG
Sbjct: 612  MGVRKQLKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPG 671

Query: 1105 LVDLTVLLNLSSKQKFIVEKLNKYE-KFKRTSILTAVYVHPLLKEVSENATMSDKACN-- 935
            LVD TVLLNLS++QK  V  LNK+E KFK+ S+ +AVY+HP LK  +E    ++   +  
Sbjct: 672  LVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEM 731

Query: 934  FNEDKMNDLISKMDFRDGAKTKFFLNMLGLCESSGEKLLVFSQYLLPLKVLERLVVNTKG 755
              + KM++++ ++D R+G K KFFLN+L LC+S+GEKLLVFSQYLLPL+ LE+L +   G
Sbjct: 732  TYQKKMDEILEQLDVREGVKVKFFLNVLALCQSAGEKLLVFSQYLLPLRFLEKLTMKVNG 791

Query: 754  WSVGKEIFMINGDTTQDDREWSMERFNTSPDAKVFFGSIKACGEGISLVGASRILIMDVH 575
            WS GKEIF+I+G+++ + REWSMERFNTSPDA+VFFGSIKACGEGISLVGASR+LI+DVH
Sbjct: 792  WSSGKEIFVISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVH 851

Query: 574  LNPSVTRQAIGRAFRPGQVRKVYVYRLVAADSPEEENHKTSFRKELISKMWFEWSEYCSD 395
            LNPSVTRQAIGRAFRPGQ +KV+VY+LVAADSPEEE+H T F+KELISKMWFEW+EYC +
Sbjct: 852  LNPSVTRQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNTCFKKELISKMWFEWNEYCGN 911

Query: 394  SNFEMETIDFKDIADEFWESPSLREDVNVLKKR 296
              FE ET++  D  D F ESP LREDV VL KR
Sbjct: 912  HEFEAETVNVSDSGDLFLESPLLREDVTVLYKR 944


>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222848411|gb|EEE85958.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 630

 Score =  523 bits (1348), Expect = e-146
 Identities = 264/391 (67%), Positives = 315/391 (80%), Gaps = 3/391 (0%)
 Frame = -3

Query: 1459 TDILHSLEKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDASKAIKRRVMSRGYI 1280
            TD+L SL KVQTPRKVVLSGTL+QNH KEVFN+LNLVRPKFL+ D S+AI +R++S+  I
Sbjct: 247  TDVLQSLAKVQTPRKVVLSGTLYQNHAKEVFNVLNLVRPKFLRMDTSRAIVKRILSKVNI 306

Query: 1279 --VRKQIKAGADTAFFDVVEETLQNDENSKTKVAVIQDLREMTRNVLHYYKGDFLDELPG 1106
               RKQ KAGAD AF+D+VE+T+Q D++ K KV VI+DL EMT  VLHYYKGDFLDELPG
Sbjct: 307  PGARKQFKAGADAAFYDLVEQTIQKDQDFKRKVTVIRDLHEMTSKVLHYYKGDFLDELPG 366

Query: 1105 LVDLTVLLNLSSKQKFIVEKLNKYE-KFKRTSILTAVYVHPLLKEVSENATMSDKACNFN 929
            LVD T++LNLSS+QK  V+KL K   KFKR+S+ +AVY+HP L   S+N+ ++D      
Sbjct: 367  LVDFTLMLNLSSRQKHEVKKLKKLAMKFKRSSVGSAVYLHPKLNSFSKNSAITD------ 420

Query: 928  EDKMNDLISKMDFRDGAKTKFFLNMLGLCESSGEKLLVFSQYLLPLKVLERLVVNTKGWS 749
             D M+DL+  +D RDG K KFFLN+L LCES+GEKLLVFSQYL PLK LERLV+  KGW 
Sbjct: 421  -DMMDDLLETVDVRDGVKAKFFLNILSLCESAGEKLLVFSQYLTPLKFLERLVMKVKGWI 479

Query: 748  VGKEIFMINGDTTQDDREWSMERFNTSPDAKVFFGSIKACGEGISLVGASRILIMDVHLN 569
            +GKEIF+I+G+++ D REWSMERFN S DAKVFFGSIKACGEGISLVGASRI+I+DVHLN
Sbjct: 480  LGKEIFVISGESSSDHREWSMERFNNSMDAKVFFGSIKACGEGISLVGASRIIILDVHLN 539

Query: 568  PSVTRQAIGRAFRPGQVRKVYVYRLVAADSPEEENHKTSFRKELISKMWFEWSEYCSDSN 389
            PSVT QAIGRAFRPGQ +KVY YRLVAADSPEEE+H T FRKE I+KMWFEW+EYC   +
Sbjct: 540  PSVTCQAIGRAFRPGQTKKVYAYRLVAADSPEEEDHTTCFRKEAIAKMWFEWNEYCGYQD 599

Query: 388  FEMETIDFKDIADEFWESPSLREDVNVLKKR 296
            FE+ T++  D  D F ES  +REDV VL KR
Sbjct: 600  FEVGTVELDDSGDRFLESLLVREDVRVLYKR 630


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  519 bits (1336), Expect = e-145
 Identities = 261/391 (66%), Positives = 314/391 (80%), Gaps = 3/391 (0%)
 Frame = -3

Query: 1459 TDILHSLEKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDASKAIKRRVMSRGYI 1280
            TD L +L KV+TPRKVVLSGTL+QNHVKEVFNI+NLVRPKF++S+ S+ I +R+MSR  I
Sbjct: 520  TDTLQTLAKVRTPRKVVLSGTLYQNHVKEVFNIVNLVRPKFMRSETSRPIIKRIMSRVDI 579

Query: 1279 --VRKQIKAGADTAFFDVVEETLQNDENSKTKVAVIQDLREMTRNVLHYYKGDFLDELPG 1106
               RKQ KAG D AF+D+VE TLQ D + + KV+VI DLREMT  +LHYYKGDFLDELPG
Sbjct: 580  PGARKQFKAGVDAAFYDLVEHTLQKDTDFRRKVSVIHDLREMTSKILHYYKGDFLDELPG 639

Query: 1105 LVDLTVLLNLSSKQKFIVEKLNKYE-KFKRTSILTAVYVHPLLKEVSENATMSDKACNFN 929
            LVD TV+LNL+SKQK   EK+ K+  KFK +S  +AVY+HP L   S NA ++D      
Sbjct: 640  LVDFTVVLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPKLNVFSVNAAVTD------ 693

Query: 928  EDKMNDLISKMDFRDGAKTKFFLNMLGLCESSGEKLLVFSQYLLPLKVLERLVVNTKGWS 749
             DK++++I KMD +DG KTKFFLN+L LC ++GEKLLVFSQYLLPLK +ERLVV  KGWS
Sbjct: 694  -DKIDEVIDKMDVKDGVKTKFFLNLLNLCATTGEKLLVFSQYLLPLKFMERLVVQKKGWS 752

Query: 748  VGKEIFMINGDTTQDDREWSMERFNTSPDAKVFFGSIKACGEGISLVGASRILIMDVHLN 569
             G+E FMI+G+TT + REWSMERFN SPDA+VFFGSIKACGEGISLVGASRI+I+DVHLN
Sbjct: 753  PGRETFMISGETTPEQREWSMERFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLN 812

Query: 568  PSVTRQAIGRAFRPGQVRKVYVYRLVAADSPEEENHKTSFRKELISKMWFEWSEYCSDSN 389
            PSVTRQAIGRAFRPGQ +KV+ YRLVA DSPEE +H T F+KELI+KMWFEW+EYC   +
Sbjct: 813  PSVTRQAIGRAFRPGQTKKVFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHD 872

Query: 388  FEMETIDFKDIADEFWESPSLREDVNVLKKR 296
            FE+ET+D K   D F E+P L +DV VL +R
Sbjct: 873  FEVETVDVKQCGDNFLETPLLGQDVKVLYRR 903