BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015427
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   133   5e-29
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   132   8e-29
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   130   2e-28
ref|XP_003594230.1| F-box protein [Medicago truncatula] gi|35548...   124   2e-26
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   120   4e-25

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  133 bits (334), Expect = 5e-29
 Identities = 90/268 (33%), Positives = 134/268 (50%), Gaps = 20/268 (7%)
 Frame = -3

Query: 779 YSAEYDSCDKAIELTLPFEEPRKCYP----IVGSCNGLICVVNHDSKDTNSSVYLWNPCT 612
           Y  + +S D+  EL    + P  CY     ++GSCNGL+C+ N         +  WNP  
Sbjct: 62  YELDLNSMDRVKEL----DHPLMCYSNRIKVLGSCNGLLCICN-----IADDIAFWNPTI 112

Query: 611 GEHITIPCPP------TQYNTDDSL--SH-FGFGFDQTNDEYKVVRIE-----DSWGLPS 474
            +H  IP  P       + NT  +L  +H +GFG+D   D+YK+V I       +    S
Sbjct: 113 RKHRIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDS 172

Query: 473 LVDVYTLLTNSWRSLEPQK-GTHFQSSNAALVNGSLHWIAAR-LSPWSTLWNLIVFFNVK 300
            V +YT+ T+ W++L           +    V+G+LHW+  R L P S   +LIV F+++
Sbjct: 173 HVKIYTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESR--DLIVAFDLR 230

Query: 299 DEVFQELLQPCDVGKSAINPCDVTVGELDGSLCLFRHHTEDKVEIWVMKVYGVVDSWAKQ 120
            EVF+E+  P  V        D+ V  L G LC+  +   D  ++WVM+ YG  DSW K 
Sbjct: 231 FEVFREVALPGTVD----GKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCKM 286

Query: 119 FTIGRPMVTGSFYFLQPLGLLKNGDIIL 36
           FT+G+P        L+PLG  +NGD +L
Sbjct: 287 FTVGQPRDVKLMKSLKPLGYSRNGDKVL 314


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  132 bits (332), Expect = 8e-29
 Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 15/243 (6%)
 Frame = -3

Query: 719 PRKCY----PIVGSCNGLICVVNHDSKDTNSSVYLWNPCTGEHITIPCPPTQ----YNTD 564
           P  CY     ++GS NGL+C+ N         + +WNP T +H  +P  P +    + T 
Sbjct: 88  PLMCYNHGIKVLGSVNGLLCISN-----VVDDIAVWNPSTRKHRVVPFLPIELKRYFGTK 142

Query: 563 D-SLSHFGFGFDQTNDEYKVVRIEDSWG-----LPSLVDVYTLLTNSWRSL-EPQKGTHF 405
             S+  FGFG+D   D+YK+VRI    G       S V VY+L   SWR + +     H+
Sbjct: 143 SCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHY 202

Query: 404 QSSNAALVNGSLHWIAARLSPWSTLWNLIVFFNVKDEVFQELLQPCDVGKSAINPCDVTV 225
             +N    NG+LHW+    +P S + N++V  ++  E ++E+LQP    K+      + +
Sbjct: 203 PGANGVFANGALHWVVGE-NPESNVANIVVALDLGVEDYREVLQPEYKDKNFY----IDL 257

Query: 224 GELDGSLCLFRHHTEDKVEIWVMKVYGVVDSWAKQFTIGRPMVTGSFYFLQPLGLLKNGD 45
           G L G LC   +   ++V++W+MK YGV +SW K F++ +  V G    L+PL   K+GD
Sbjct: 258 GVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGD 317

Query: 44  IIL 36
            +L
Sbjct: 318 EVL 320


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  130 bits (328), Expect = 2e-28
 Identities = 87/275 (31%), Positives = 138/275 (50%), Gaps = 16/275 (5%)
 Frame = -3

Query: 779 YSAEYDSCDKAIELTLPFEEPRKCY----PIVGSCNGLICVVNHDSKDTNSSVYLWNPCT 612
           YS  +D  D       P + P  CY     I+GSCNGL+C+ N         + LWNP  
Sbjct: 65  YSLSFDLLDNI----QPLDHPLMCYNHGVKILGSCNGLLCICN-----IVDDIALWNPSI 115

Query: 611 GEHITIPCPPTQYNT-----DDSLSHFGFGFDQTNDEYKVVRIEDSWGLP-----SLVDV 462
             H  +P  P +           +S FGFG+D +ND+YK+VRI    G+      S V V
Sbjct: 116 RAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKV 175

Query: 461 YTLLTNSWRSLEPQKG-THFQSSNAALVNGSLHWIAARLSPWSTLWNLIVFFNVKDEVFQ 285
           ++L  NSWR +        +   N    NG+LHW+ ++  P ST+ + IV  ++  E + 
Sbjct: 176 FSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQ-DPDSTVADTIVALDLGVEDYH 234

Query: 284 ELLQPCDVGKSAINPCDVTVGELDGSLCLFRHHTEDKVEIWVMKVYGVVDSWAKQFTIGR 105
            + +P  V  +    C++ VG L G L L  +   ++V++WVM+ Y V +SW+K F++ R
Sbjct: 235 VVPKPEFVDMN----CNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKLFSVAR 290

Query: 104 PMVTGSFYFLQPLGLLKNG-DIILKKNTQHFILYD 3
             V G    L+PL   K+G +++++ +  +   YD
Sbjct: 291 LEVIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYD 325


>ref|XP_003594230.1| F-box protein [Medicago truncatula] gi|355483278|gb|AES64481.1|
           F-box protein [Medicago truncatula]
          Length = 409

 Score =  124 bits (312), Expect = 2e-26
 Identities = 86/271 (31%), Positives = 134/271 (49%), Gaps = 26/271 (9%)
 Frame = -3

Query: 770 EYDSCDKAIELTLPFEEPRKCYPIVGSCNGLICVVNHD----SKDTNSSVYLWNPCTGEH 603
           ++ +   A+ L  PF        ++GSCNGL+ V N +      +  + + +WNP   +H
Sbjct: 69  DFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITIWNPNIRKH 128

Query: 602 ITIP------CPPTQYNTDDSLSHFGFGFDQTNDEYKVVRIEDSWGLPSL--------VD 465
             IP       P +  + + SL   GFGFD    +YK++R+  SW L SL        V 
Sbjct: 129 HIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRL--SW-LVSLQNPFYDPHVR 185

Query: 464 VYTLLTNSWRSLEPQK-GTHFQSSNAALVNGSLHWIAAR----LSPWSTLWNLIVFFNVK 300
           +++L TNSW+ +        F  +   LV  S+HWI A+    L P     +LIV FN+ 
Sbjct: 186 LFSLKTNSWKIIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGLHP-----SLIVAFNLT 240

Query: 299 DEVFQELLQPCDVGKSAINPCD---VTVGELDGSLCLFRHHTEDKVEIWVMKVYGVVDSW 129
            E+F E+  P ++G+  +N  D   + V  L G LC+  ++   K+++WVMK YG+ DSW
Sbjct: 241 LEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVWVMKQYGLKDSW 300

Query: 128 AKQFTIGRPMVTGSFYFLQPLGLLKNGDIIL 36
            K FT+ +  VT       PL    +G  +L
Sbjct: 301 CKLFTMMKSCVTSHLKSSSPLCYSSDGSKVL 331


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score =  120 bits (300), Expect = 4e-25
 Identities = 91/290 (31%), Positives = 139/290 (47%), Gaps = 31/290 (10%)
 Frame = -3

Query: 779 YSAEYDSCDKAIELTLPFEEPRKCYPIVGSCNGLICVVNHDSKDTNSSVYLWNPCTGEHI 600
           ++A  +  +K   +  PF      + +VGSCNGL+C+        N S+Y++NP TG + 
Sbjct: 97  FAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCL---SDSLFNDSLYIYNPFTGRYK 153

Query: 599 TIPCPPTQYNTDDSLSHFGFGFDQTNDEYKVVRI----EDSWGLP---------SLVDVY 459
            +P    QY   + +  FGFGF+   +EYKV+RI          P         S V + 
Sbjct: 154 ELP-KSLQYPDQEVV--FGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQIL 210

Query: 458 TLLTNSWRSLEPQKGTHFQSSNAALVNGSLHWIA--ARLSPWSTLWNLIVFFNVKDEVFQ 285
           TL    WRSL        + ++  LVNG LHW++   R  P   L    V F++ DE F+
Sbjct: 211 TLGCPGWRSLGKVSYRLVRRASETLVNGRLHWVSRPCRNKPARRL----VSFDLTDEQFR 266

Query: 284 ELLQPCDVGKSAINPCDVTVGELDGSLCLFRHHTEDKVEIWVMKVYGVVDSWAKQFTIGR 105
           E+ +P D G   +N CD  +  L G L +  +    ++EIWVMK Y V +SW K++ IG 
Sbjct: 267 EVPKP-DCG--GLNRCDYHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVKESWVKEYNIGA 323

Query: 104 PMVTG----------------SFYFLQPLGLLKNGDIILKKNTQHFILYD 3
            M  G                +   ++ L +LKNG+I+L+   +  + YD
Sbjct: 324 YMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYD 373