BLASTX nr result

ID: Cimicifuga21_contig00015425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015425
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004222261.1| hypothetical protein BevumaM_p022 [Beta vulg...    97   8e-32
emb|CAN73973.1| hypothetical protein VITISV_023797 [Vitis vinifera]   107   1e-21

>ref|YP_004222261.1| hypothetical protein BevumaM_p022 [Beta vulgaris subsp. maritima]
           gi|346683138|ref|YP_004842068.1| hypothetical protein
           BemaM_p020 [Beta macrocarpa]
           gi|317905698|emb|CBX33237.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439778|emb|CBX33289.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148010|emb|CBJ20676.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500056|emb|CBX24872.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939212|emb|CBL52058.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 134

 Score = 97.4 bits (241), Expect(2) = 8e-32
 Identities = 47/48 (97%), Positives = 47/48 (97%)
 Frame = +3

Query: 3   QRALGCGGAIIAQLPNLMRHRVRTAGNRSMGGRLILLPPQGWLIVRSR 146
           QRALGCGGAIIAQLPNLMRHRVRTAGNRSMGGRLILLP QGWLIVRSR
Sbjct: 57  QRALGCGGAIIAQLPNLMRHRVRTAGNRSMGGRLILLPSQGWLIVRSR 104



 Score = 64.7 bits (156), Expect(2) = 8e-32
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = +1

Query: 154 ELPWFWKAHESERYYECATDTTLRRYLCR 240
           E PWFWKAHESERY ECATDTTLRRYLCR
Sbjct: 106 EDPWFWKAHESERYVECATDTTLRRYLCR 134


>emb|CAN73973.1| hypothetical protein VITISV_023797 [Vitis vinifera]
          Length = 291

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/83 (68%), Positives = 57/83 (68%)
 Frame = -1

Query: 250 RRLTCTGTYVV*CRSHIHNSVRTHVPSRTRGVPLLLLRTISQPCGGKRIRRPPMLRFPAV 71
           RRLTCTGTY     S                    LLRTISQPCG KRIRRPPMLRFPAV
Sbjct: 209 RRLTCTGTYNQGSSS--------------------LLRTISQPCGVKRIRRPPMLRFPAV 248

Query: 70  RTRCRIRLGSWAIIAPPHPKARC 2
           RTRCRIRLGSWAIIAPPHPKARC
Sbjct: 249 RTRCRIRLGSWAIIAPPHPKARC 271


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