BLASTX nr result

ID: Cimicifuga21_contig00015410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015410
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK20967.1| unknown [Picea sitchensis] gi|116790854|gb|ABK257...    56   3e-06
ref|NP_188703.1| histone H2A 13 [Arabidopsis thaliana] gi|297830...    56   3e-06
ref|XP_002272843.1| PREDICTED: probable histone H2A.3 [Vitis vin...    55   4e-06
ref|XP_002275483.1| PREDICTED: probable histone H2A.3 [Vitis vin...    55   4e-06
ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucu...    55   8e-06

>gb|ABK20967.1| unknown [Picea sitchensis] gi|116790854|gb|ABK25764.1| unknown
           [Picea sitchensis]
          Length = 140

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = -3

Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132
           NDEELSKLLGTVTIANGGVMPNI+++LLP
Sbjct: 93  NDEELSKLLGTVTIANGGVMPNIHNILLP 121


>ref|NP_188703.1| histone H2A 13 [Arabidopsis thaliana]
           gi|297830764|ref|XP_002883264.1| hypothetical protein
           ARALYDRAFT_898500 [Arabidopsis lyrata subsp. lyrata]
           gi|75311179|sp|Q9LHQ5.1|H2A2_ARATH RecName:
           Full=Probable histone H2A.2; AltName: Full=HTA13
           gi|9294346|dbj|BAB02243.1| histone H2A-like protein
           [Arabidopsis thaliana] gi|15028329|gb|AAK76641.1|
           putative histone H2A protein [Arabidopsis thaliana]
           gi|19310641|gb|AAL85051.1| putative histone H2A protein
           [Arabidopsis thaliana] gi|21553450|gb|AAM62543.1|
           histone H2A, putative [Arabidopsis thaliana]
           gi|297329104|gb|EFH59523.1| hypothetical protein
           ARALYDRAFT_898500 [Arabidopsis lyrata subsp. lyrata]
           gi|332642889|gb|AEE76410.1| histone H2A 13 [Arabidopsis
           thaliana]
          Length = 132

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132
           NDEELSKLLG VTIANGGVMPNI+SLLLP
Sbjct: 91  NDEELSKLLGDVTIANGGVMPNIHSLLLP 119


>ref|XP_002272843.1| PREDICTED: probable histone H2A.3 [Vitis vinifera]
           gi|296086995|emb|CBI33257.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = -3

Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132
           NDEELSKLLG+VTIANGGVMPNI++LLLP
Sbjct: 91  NDEELSKLLGSVTIANGGVMPNIHNLLLP 119


>ref|XP_002275483.1| PREDICTED: probable histone H2A.3 [Vitis vinifera]
           gi|297744943|emb|CBI38491.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = -3

Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132
           NDEELSKLLG+VTIANGGVMPNI++LLLP
Sbjct: 91  NDEELSKLLGSVTIANGGVMPNIHNLLLP 119


>ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucumis sativus]
           gi|449522341|ref|XP_004168185.1| PREDICTED: probable
           histone H2A.1-like [Cucumis sativus]
          Length = 135

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -3

Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132
           NDEELSKLLG VTIANGGVMPNI++LLLP
Sbjct: 91  NDEELSKLLGDVTIANGGVMPNIHNLLLP 119


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