BLASTX nr result
ID: Cimicifuga21_contig00015410
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00015410 (220 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK20967.1| unknown [Picea sitchensis] gi|116790854|gb|ABK257... 56 3e-06 ref|NP_188703.1| histone H2A 13 [Arabidopsis thaliana] gi|297830... 56 3e-06 ref|XP_002272843.1| PREDICTED: probable histone H2A.3 [Vitis vin... 55 4e-06 ref|XP_002275483.1| PREDICTED: probable histone H2A.3 [Vitis vin... 55 4e-06 ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucu... 55 8e-06 >gb|ABK20967.1| unknown [Picea sitchensis] gi|116790854|gb|ABK25764.1| unknown [Picea sitchensis] Length = 140 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/29 (89%), Positives = 29/29 (100%) Frame = -3 Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132 NDEELSKLLGTVTIANGGVMPNI+++LLP Sbjct: 93 NDEELSKLLGTVTIANGGVMPNIHNILLP 121 >ref|NP_188703.1| histone H2A 13 [Arabidopsis thaliana] gi|297830764|ref|XP_002883264.1| hypothetical protein ARALYDRAFT_898500 [Arabidopsis lyrata subsp. lyrata] gi|75311179|sp|Q9LHQ5.1|H2A2_ARATH RecName: Full=Probable histone H2A.2; AltName: Full=HTA13 gi|9294346|dbj|BAB02243.1| histone H2A-like protein [Arabidopsis thaliana] gi|15028329|gb|AAK76641.1| putative histone H2A protein [Arabidopsis thaliana] gi|19310641|gb|AAL85051.1| putative histone H2A protein [Arabidopsis thaliana] gi|21553450|gb|AAM62543.1| histone H2A, putative [Arabidopsis thaliana] gi|297329104|gb|EFH59523.1| hypothetical protein ARALYDRAFT_898500 [Arabidopsis lyrata subsp. lyrata] gi|332642889|gb|AEE76410.1| histone H2A 13 [Arabidopsis thaliana] Length = 132 Score = 55.8 bits (133), Expect = 3e-06 Identities = 27/29 (93%), Positives = 28/29 (96%) Frame = -3 Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132 NDEELSKLLG VTIANGGVMPNI+SLLLP Sbjct: 91 NDEELSKLLGDVTIANGGVMPNIHSLLLP 119 >ref|XP_002272843.1| PREDICTED: probable histone H2A.3 [Vitis vinifera] gi|296086995|emb|CBI33257.3| unnamed protein product [Vitis vinifera] Length = 135 Score = 55.5 bits (132), Expect = 4e-06 Identities = 26/29 (89%), Positives = 29/29 (100%) Frame = -3 Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132 NDEELSKLLG+VTIANGGVMPNI++LLLP Sbjct: 91 NDEELSKLLGSVTIANGGVMPNIHNLLLP 119 >ref|XP_002275483.1| PREDICTED: probable histone H2A.3 [Vitis vinifera] gi|297744943|emb|CBI38491.3| unnamed protein product [Vitis vinifera] Length = 136 Score = 55.5 bits (132), Expect = 4e-06 Identities = 26/29 (89%), Positives = 29/29 (100%) Frame = -3 Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132 NDEELSKLLG+VTIANGGVMPNI++LLLP Sbjct: 91 NDEELSKLLGSVTIANGGVMPNIHNLLLP 119 >ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucumis sativus] gi|449522341|ref|XP_004168185.1| PREDICTED: probable histone H2A.1-like [Cucumis sativus] Length = 135 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/29 (89%), Positives = 28/29 (96%) Frame = -3 Query: 218 NDEELSKLLGTVTIANGGVMPNINSLLLP 132 NDEELSKLLG VTIANGGVMPNI++LLLP Sbjct: 91 NDEELSKLLGDVTIANGGVMPNIHNLLLP 119