BLASTX nr result

ID: Cimicifuga21_contig00015397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015397
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32,...   457   e-126
ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|2...   453   e-125
ref|XP_003530511.1| PREDICTED: WW domain-containing oxidoreducta...   450   e-124
ref|XP_002518876.1| short-chain dehydrogenase, putative [Ricinus...   439   e-121
ref|XP_002303676.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120

>ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
            vinifera] gi|297742402|emb|CBI34551.3| unnamed protein
            product [Vitis vinifera]
          Length = 336

 Score =  457 bits (1176), Expect = e-126
 Identities = 238/346 (68%), Positives = 275/346 (79%)
 Frame = -2

Query: 1288 MLETIKYLIGAVGASGFSSKSTAEQVTEASPDFGFITAIITGXXXXXXXXXXXXXXXXXX 1109
            ML+ +KYL+G+ GASG+ SKSTAE+VTE  PD G +TA+ITG                  
Sbjct: 1    MLDALKYLLGSFGASGYGSKSTAEEVTENCPDLGSVTAVITGATS--------------- 45

Query: 1108 XXXXXXXXGIGAETARVLAKRGARLVLPXXXXXXXXXXXXRIVNEFPDTEILIMSLDLSS 929
                    GIGAETARVLAKRGARLVLP            RIV EFP++EI++M+LDLSS
Sbjct: 46   --------GIGAETARVLAKRGARLVLPARSLKAAEEAKARIVAEFPNSEIVVMALDLSS 97

Query: 928  LTSVRNFVSNFESLNLPLHLLINNAGKFSHDYAISEDGIEMTFATNYLGHFLLTRLLLNK 749
            L SVR FVS FESL+LPL+LLINNAGKF+H++AISEDGIEMTFATNYLGHFLLT+LLLNK
Sbjct: 98   LDSVRCFVSEFESLDLPLNLLINNAGKFTHEHAISEDGIEMTFATNYLGHFLLTKLLLNK 157

Query: 748  MIETAKLSGHEGRVVNVSSSIHSWFSGDGIHYLEQINSKRSFFDPTRAYALSKLANVLHT 569
            MIETAK +G +GR+VNVSS+IHSWFSGD I YL  I   +S +D TRAYA+SKLANVLHT
Sbjct: 158  MIETAKKTGVQGRIVNVSSTIHSWFSGDVIRYLGLITRNKSQYDATRAYAVSKLANVLHT 217

Query: 568  MELAHRLKKMEANVTINCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTCY 389
             ELA RLK+M+ANVT+NCVHPG+VRTRLTRE EG +TDL+FFL SK LKTIPQAAATTCY
Sbjct: 218  KELAQRLKQMDANVTVNCVHPGIVRTRLTRETEGIVTDLIFFLTSKFLKTIPQAAATTCY 277

Query: 388  VATHPRLVGVSGKYFADCNEALTSKLGSNMKEAARLWAASEALIAK 251
            VATHPRLV VSGKYFADCNEA TSKLGSN +EA+RLW+ASE + A+
Sbjct: 278  VATHPRLVNVSGKYFADCNEAWTSKLGSNSQEASRLWSASEIMTAR 323


>ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|222846702|gb|EEE84249.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  453 bits (1165), Expect = e-125
 Identities = 241/350 (68%), Positives = 273/350 (78%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1288 MLETIKYLIGAVGASGFSSKSTAEQVTEASPDFGFITAIITGXXXXXXXXXXXXXXXXXX 1109
            M E++KYL G+ GASG+ SKST EQVTE   D   ITAIITG                  
Sbjct: 1    MFESLKYLTGSAGASGYGSKSTGEQVTENCGDLHSITAIITGATS--------------- 45

Query: 1108 XXXXXXXXGIGAETARVLAKRGARLVLPXXXXXXXXXXXXRIVNEFPDTEILIMSLDLSS 929
                    GIGAETARVLAKRGARLVLP            RI++E PDTEI++M LDLSS
Sbjct: 46   --------GIGAETARVLAKRGARLVLPARSLKAAEDAKARIISENPDTEIIVMGLDLSS 97

Query: 928  LTSVRNFVSNFESLNLPLHLLINNAGKFSHDYAISEDGIEMTFATNYLGHFLLTRLLLNK 749
            L SVRNFVS FES +LPL+LLINNAGKF+H++AISEDGIEMTFATN+LGHFLLT+LLL K
Sbjct: 98   LNSVRNFVSEFESFDLPLNLLINNAGKFAHEHAISEDGIEMTFATNFLGHFLLTKLLLKK 157

Query: 748  MIETAKLSGHEGRVVNVSSSIHSWFSGDGIHYLEQIN-SKRSFFDPTRAYALSKLANVLH 572
            MIETAK +G +GR+VNVSSSI++WFSGD I YL QI+ +K   FDPTRAYALSKLANVLH
Sbjct: 158  MIETAKTTGIQGRIVNVSSSIYNWFSGDPIRYLGQISRNKLRDFDPTRAYALSKLANVLH 217

Query: 571  TMELAHRLKKMEANVTINCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTC 392
            T ELA RLK+MEANVT+NCVHPGVVRTRLTREREG +TD+ FFL SKLLKTIPQAAATTC
Sbjct: 218  TKELAQRLKQMEANVTVNCVHPGVVRTRLTREREGIVTDMAFFLTSKLLKTIPQAAATTC 277

Query: 391  YVATHPRLVGVSGKYFADCNEALTSKLGSNMKEAARLWAASEALIAKRFK 242
            YVATHPRLV V+GKYF+DCNEA TSKLGSN  EAARLW ASE ++++  K
Sbjct: 278  YVATHPRLVNVTGKYFSDCNEASTSKLGSNSTEAARLWTASEIMVSRGSK 327


>ref|XP_003530511.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 1
            [Glycine max]
          Length = 337

 Score =  450 bits (1158), Expect = e-124
 Identities = 235/346 (67%), Positives = 268/346 (77%)
 Frame = -2

Query: 1288 MLETIKYLIGAVGASGFSSKSTAEQVTEASPDFGFITAIITGXXXXXXXXXXXXXXXXXX 1109
            MLET+KYL+G+ G SGF SK+TAEQVTE   D   ITAIITG                  
Sbjct: 1    MLETVKYLLGSAGPSGFGSKTTAEQVTENHADLRSITAIITGATS--------------- 45

Query: 1108 XXXXXXXXGIGAETARVLAKRGARLVLPXXXXXXXXXXXXRIVNEFPDTEILIMSLDLSS 929
                    GIG ETARVLAKRGARLVLP            RIV+E PD+EI++M+LDLSS
Sbjct: 46   --------GIGTETARVLAKRGARLVLPARSMKAAEDAKARIVSECPDSEIIVMALDLSS 97

Query: 928  LTSVRNFVSNFESLNLPLHLLINNAGKFSHDYAISEDGIEMTFATNYLGHFLLTRLLLNK 749
            L SV NFV++F SL LPLHLLINNAGKF+H++AISEDG+EMTFATNYLGHF++T LL+ K
Sbjct: 98   LNSVTNFVAHFHSLGLPLHLLINNAGKFAHEHAISEDGVEMTFATNYLGHFVMTNLLVKK 157

Query: 748  MIETAKLSGHEGRVVNVSSSIHSWFSGDGIHYLEQINSKRSFFDPTRAYALSKLANVLHT 569
            M+ETAK +G +GR+VNVSSSIH WFSGD I YL  I+  +  +D TRAYALSKLANV HT
Sbjct: 158  MVETAKETGVQGRIVNVSSSIHGWFSGDAISYLALISRNKRHYDATRAYALSKLANVFHT 217

Query: 568  MELAHRLKKMEANVTINCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTCY 389
             ELA RL++M ANVT+NCVHPG+VRTRLTREREG LTDLVFFLASKLLKTIPQAAATTCY
Sbjct: 218  KELARRLQQMGANVTVNCVHPGIVRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCY 277

Query: 388  VATHPRLVGVSGKYFADCNEALTSKLGSNMKEAARLWAASEALIAK 251
            VATHPRL+ VSGKYFADCNE  TSKLGSN  EAARLWAASE +I++
Sbjct: 278  VATHPRLLNVSGKYFADCNETSTSKLGSNSTEAARLWAASEFMISR 323


>ref|XP_002518876.1| short-chain dehydrogenase, putative [Ricinus communis]
            gi|223541863|gb|EEF43409.1| short-chain dehydrogenase,
            putative [Ricinus communis]
          Length = 339

 Score =  439 bits (1130), Expect = e-121
 Identities = 232/347 (66%), Positives = 274/347 (78%), Gaps = 1/347 (0%)
 Frame = -2

Query: 1288 MLETIKYLIGAVGASGFSSKSTAEQVTEASPDFGFITAIITGXXXXXXXXXXXXXXXXXX 1109
            MLET+KYLIG+ G S F SKSTAEQVTE S D   +TAIITG                  
Sbjct: 1    MLETVKYLIGSAGPSNFGSKSTAEQVTEFS-DLRSVTAIITGATS--------------- 44

Query: 1108 XXXXXXXXGIGAETARVLAKRGARLVLPXXXXXXXXXXXXRIVNEF-PDTEILIMSLDLS 932
                    GIGAETARVLAK+GARLV+P            RI+++F P++EI+IM+LDLS
Sbjct: 45   --------GIGAETARVLAKQGARLVIPARSMKAAEEAKARIMSDFKPESEIIIMALDLS 96

Query: 931  SLTSVRNFVSNFESLNLPLHLLINNAGKFSHDYAISEDGIEMTFATNYLGHFLLTRLLLN 752
            SL SV+NFV+ FES NLPL+LLINNAG F+H++AISEDGIEMTFATNYLGHFLLT+LLL 
Sbjct: 97   SLNSVKNFVAEFESFNLPLNLLINNAGTFAHEHAISEDGIEMTFATNYLGHFLLTKLLLK 156

Query: 751  KMIETAKLSGHEGRVVNVSSSIHSWFSGDGIHYLEQINSKRSFFDPTRAYALSKLANVLH 572
            KMIETAK +G +GR+VNVSSSIHSWFSGD I YL +I+  +  +D TRAYALSKLAN+LH
Sbjct: 157  KMIETAKETGVQGRIVNVSSSIHSWFSGDMIRYLGEISRNKCHYDATRAYALSKLANILH 216

Query: 571  TMELAHRLKKMEANVTINCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTC 392
            T ELA RLK+MEANVT+NCVHPG+VRTRLTREREG LTD+VFF+ASKLLKTIPQAAATTC
Sbjct: 217  TKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGILTDMVFFMASKLLKTIPQAAATTC 276

Query: 391  YVATHPRLVGVSGKYFADCNEALTSKLGSNMKEAARLWAASEALIAK 251
            +VAT PRL+ VSGKYFADCNEA  SKLGS+  EA++LW+ASE ++++
Sbjct: 277  FVATSPRLLNVSGKYFADCNEASASKLGSSSTEASKLWSASEIMVSR 323


>ref|XP_002303676.1| predicted protein [Populus trichocarpa] gi|222841108|gb|EEE78655.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  437 bits (1124), Expect = e-120
 Identities = 236/345 (68%), Positives = 266/345 (77%), Gaps = 1/345 (0%)
 Frame = -2

Query: 1288 MLETIKYLIGAVGASGFSSKSTAEQVTEASPDFGFITAIITGXXXXXXXXXXXXXXXXXX 1109
            M ET+KYL+G+ GASG+ SKSTAEQVTE   D   ITAIITG                  
Sbjct: 1    MFETLKYLVGSAGASGYGSKSTAEQVTENCCDLHSITAIITGATS--------------- 45

Query: 1108 XXXXXXXXGIGAETARVLAKRGARLVLPXXXXXXXXXXXXRIVNEFPDTEILIMSLDLSS 929
                    GIGAETARVLAKRGARLVLP            RI++E PD +I++M LDLSS
Sbjct: 46   --------GIGAETARVLAKRGARLVLPARNLKGAEDAKARILSENPDADIIVMGLDLSS 97

Query: 928  LTSVRNFVSNFESLNLPLHLLINNAGKFSHDYAISEDGIEMTFATNYLGHFLLTRLLLNK 749
            L SVRNFVS FESLNLPL+LLINNAG+F+ + AISEDGIEMTFATNYLGHFLLT+LLL K
Sbjct: 98   LNSVRNFVSEFESLNLPLNLLINNAGRFALEPAISEDGIEMTFATNYLGHFLLTKLLLKK 157

Query: 748  MIETAKLSGHEGRVVNVSSSIHSWFSGDGIHYLEQIN-SKRSFFDPTRAYALSKLANVLH 572
            MIETAK +  +GR+VNVSSSI++WFSGD I YL +I+ +K   FDPTRAYALSKLA VLH
Sbjct: 158  MIETAKTTSLQGRIVNVSSSIYNWFSGDMIRYLCEISRNKLCDFDPTRAYALSKLAIVLH 217

Query: 571  TMELAHRLKKMEANVTINCVHPGVVRTRLTREREGFLTDLVFFLASKLLKTIPQAAATTC 392
            T E+A RLK+MEANVT+NCVHPGVVRTRLTREREG  TD+ FFL SKLLKTIPQAAATTC
Sbjct: 218  TKEVAQRLKQMEANVTVNCVHPGVVRTRLTREREGMATDIAFFLTSKLLKTIPQAAATTC 277

Query: 391  YVATHPRLVGVSGKYFADCNEALTSKLGSNMKEAARLWAASEALI 257
            YVATHP LV V+GKYF+DCNEA TSKLGSN  EAARLW ASE ++
Sbjct: 278  YVATHPTLVNVTGKYFSDCNEASTSKLGSNSTEAARLWTASEIMV 322


Top