BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015391
         (3492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-l...  1259   0.0  
emb|CBI26906.3| unnamed protein product [Vitis vinifera]             1244   0.0  
ref|XP_002526020.1| conserved hypothetical protein [Ricinus comm...  1149   0.0  
ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|2...  1132   0.0  
ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis th...  1077   0.0  

>ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
          Length = 1036

 Score = 1259 bits (3257), Expect = 0.0
 Identities = 653/1004 (65%), Positives = 790/1004 (78%), Gaps = 9/1004 (0%)
 Frame = -3

Query: 3196 QSHYLCCNEKNLKNAISFEVEKGYPNAVGGTMRFSNFXXXXXXXXXXXXXXXSAHKLLEE 3017
            QS   CC+EK L+ AI+FE E+GY NA+G  MRFSNF                  KLL+E
Sbjct: 40   QSADECCSEKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDE 99

Query: 3016 VNSYSTASIADRSKFLNKVSVLMGYDSVQDLLENERTQKKSGADFQDKLDEFDFSLAQRR 2837
            V+SY  ASI+DRSK LNKVSVLMGYDS+ DL+ENER QK+S  + +D+++  D SLA R+
Sbjct: 100  VDSYGKASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACRK 159

Query: 2836 FPSIIMGSSSPIYLFDEIGGKSERKSHMLDKSCQVCIPSSIGGELLD-IERQRKTGPTLD 2660
            FPSII+G+S P+ L+DE    S+ +S +  + C+  + SS G E  D  +R  +T P+L 
Sbjct: 160  FPSIILGNSPPVELYDENKCHSDVRSLLAAQICEEFLSSS-GAEKWDGPDRFSETWPSLC 218

Query: 2659 SPIVT-NSSLLEEKSSNILPISLRYPALQTDGKSVPNATAENSPSTLAFESEQKATIVEM 2483
              +   N+SLL ++SS+ LP+S +   ++T  KS    T E  P+ +  ES+  A  VE+
Sbjct: 219  PTLPNINASLLRKESSSTLPVSSQPLTMETKEKSDVLVTVEGPPANMVLESQNNAEPVEL 278

Query: 2482 ILDKPLNTVPGISTKQCRQLENCGFHTVRKLLHHFPRTYADLQNAQGEVVDGNYIISIGK 2303
            ILDK ++ +PG+  + CRQLENCGFHT+RKLL HFPRTYADL+NA   + DG Y+ISIGK
Sbjct: 279  ILDKSISFIPGLQKRHCRQLENCGFHTLRKLLQHFPRTYADLKNALIGIDDGQYMISIGK 338

Query: 2302 VLSSRGIRAGSSFSFLEIVVACDIANNLAASDCKNDYDS------TDAKKTIYLHLKRFF 2141
            +LSSRG++A  SFSFLE+VV C+IA      DC++ Y+       +  KKTIYLHLK+FF
Sbjct: 339  ILSSRGVKASCSFSFLEVVVGCEIA------DCESKYEQMIGANDSWGKKTIYLHLKKFF 392

Query: 2140 RGTRFTNPYFLKSIQSKHKEGDYVCVSGKVKTMTKEDHFEIREYNVDMIADEKESCLHGE 1961
            RGTRFTN  FL+ +Q KHKEGD VCVSGKV+TM  +DH+E+REYN+D+I D+++S +  +
Sbjct: 393  RGTRFTNVPFLRCLQEKHKEGDIVCVSGKVRTMRTKDHYEMREYNLDLIEDDQDSSVCPK 452

Query: 1960 GRPYPLYPSKGGLNPDFLREMISRVLRALSADIDPIPKDICEEFDLLSLYDAYMVIHHPK 1781
            GRPY +YPSKGGLN +FLR++ISR L +L  +IDPIPKDI E+F LLSL+ AY+ IH PK
Sbjct: 453  GRPYSIYPSKGGLNSNFLRDIISRALHSLPVNIDPIPKDIIEDFGLLSLHSAYVGIHQPK 512

Query: 1780 NFNEADLARKRLLFDEFFYLQLGRLFQMLEPLGTRLEREGLLDRYRKSNLNGVLIEDWSV 1601
            +  EADLARKRL+FDEFFYLQLGRLFQ+LE LGT++E++GLLD+YRK  LN V +E+WS 
Sbjct: 513  DLKEADLARKRLIFDEFFYLQLGRLFQILEGLGTKIEKDGLLDKYRKPELNTVFVEEWSS 572

Query: 1600 LSHKMLKALPYSLTSSQLKAISEIIWDLKQPVPMYRLLQGDVGCGKTIVAFLACMEVIGS 1421
            L+   LKALPYSLTSSQL A SEIIWDLK+PVPM RLLQGDVGCGKT+VAFLACMEVIGS
Sbjct: 573  LTKNFLKALPYSLTSSQLSAASEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGS 632

Query: 1420 GYQAAFMVPTELLAVQHYEHLHSLLNSID-EPCRPSIALLTGSTPARQSRIIRKGLQDGD 1244
            GYQAAFMVPTELLA+QHYE L +LL +++   C+PSIALLTGSTP++QSR+  KGLQ+GD
Sbjct: 633  GYQAAFMVPTELLALQHYEQLINLLENMEGAECKPSIALLTGSTPSKQSRMTHKGLQNGD 692

Query: 1243 ISLVIGTHSLIAESIEFSTLRIAVIDEQHRFGVIQRGRFNSKLFPSSASLKKNAEDTDAS 1064
            ISLVIGTHSLI+E +EFS LRIAV+DEQHRFGVIQRGRFNSKL+ +S S +     +D  
Sbjct: 693  ISLVIGTHSLISEKVEFSALRIAVVDEQHRFGVIQRGRFNSKLYYNSISSRMAEASSDVL 752

Query: 1063 FKDEVFMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRKPVETYIFEGNYAGNES 884
             + +  MAPH+LAMSATPIPRTLALALYGDMSLTQITDLPPGR PVETY  EG  AG E 
Sbjct: 753  SEGDTRMAPHILAMSATPIPRTLALALYGDMSLTQITDLPPGRTPVETYTIEGCDAGFED 812

Query: 883  VYQMMQDELQSEGKIYIVYPIIEVSEQLPQLRAASSDLETISEKFDRYKCGLLHGKMKSD 704
            VYQMM DEL+  GKIYIVYP+IE SEQLPQLRAAS+DLETIS +F  YKCGLLHG+MKSD
Sbjct: 813  VYQMMLDELEVGGKIYIVYPVIEQSEQLPQLRAASTDLETISSRFQGYKCGLLHGRMKSD 872

Query: 703  IKDEALRRFKSGETHILLSTQVVEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGTK 524
             KDEALRRF+SGET+ILLSTQV+EIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRG +
Sbjct: 873  EKDEALRRFRSGETNILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGVR 932

Query: 523  KSKCIFLVSSASAMSRLKVLEKSSDGFHLANVXXXXXXXXXXXGKKQSGHLPEFPIARLE 344
            KSKC+ + S+AS ++RLKVLE SSDGF+LAN+           GKKQSGHLPEFPIARLE
Sbjct: 933  KSKCLLVSSTASGLNRLKVLENSSDGFYLANMDLLLRGPGDLLGKKQSGHLPEFPIARLE 992

Query: 343  TDGNMLEEAYYAALKILGTSHDLECFPKLKAELSMRQPLCLLGD 212
             DGN+L+EA+ AALKILGTSHDLE FP+LKAELSMRQPLCLLGD
Sbjct: 993  IDGNILQEAHLAALKILGTSHDLEQFPELKAELSMRQPLCLLGD 1036


>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
          Length = 988

 Score = 1244 bits (3218), Expect = 0.0
 Identities = 648/1006 (64%), Positives = 782/1006 (77%), Gaps = 10/1006 (0%)
 Frame = -3

Query: 3199 VQSHYLCCNEKNLKNAISFEVEKGYPNAVGGTMRFSNFXXXXXXXXXXXXXXXSAHKLLE 3020
            V+S  +CC+EK L+ AI+FE E+GY NA+G  MRFSNF                  KLL+
Sbjct: 8    VRSCGMCCSEKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLD 67

Query: 3019 EVNSYSTASIADRSKFLNKVSVLMGYDSVQDLLENERTQKKSGADFQDKLDEFDFSLAQR 2840
            EV+SY  ASI+DRSK LNKVSVLMGYDS+ DL+ENER QK+S  + +D+++  D SLA R
Sbjct: 68   EVDSYGKASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACR 127

Query: 2839 RFPSIIMGSSSPIYLFDEIGGKSERKSHMLDKSCQVCIPSSIGGELLD-IERQRKTGPTL 2663
            +FPSII+G+S P+ L+DE    S+ +S +  + C+  + SS G E  D  +R  +T P+L
Sbjct: 128  KFPSIILGNSPPVELYDENKCHSDVRSLLAAQICEEFLSSS-GAEKWDGPDRFSETWPSL 186

Query: 2662 --DSPIVTNSSLLEEKSSNILPISLRYPALQTDGKSVPNATAENSPSTLAFESEQKATIV 2489
                P +  S L +EK S++L                   T E  P+ +  ES+  A  V
Sbjct: 187  CPTLPNINASLLRKEKKSDVL------------------VTVEGPPANMVLESQNNAEPV 228

Query: 2488 EMILDKPLNTVPGISTKQCRQLENCGFHTVRKLLHHFPRTYADLQNAQGEVVDGNYIISI 2309
            E+ILDK ++ +PG+  + CRQLENCGFHT+RKLL HFPRTYADL+NA   + DG Y+ISI
Sbjct: 229  ELILDKSISFIPGLQKRHCRQLENCGFHTLRKLLQHFPRTYADLKNALIGIDDGQYMISI 288

Query: 2308 GKVLSSRGIRAGSSFSFLEIVVACDIANNLAASDCKNDYDS------TDAKKTIYLHLKR 2147
            GK+LSSRG++A  SFSFLE+VV C+IA      DC++ Y+       +  KKTIYLHLK+
Sbjct: 289  GKILSSRGVKASCSFSFLEVVVGCEIA------DCESKYEQMIGANDSWGKKTIYLHLKK 342

Query: 2146 FFRGTRFTNPYFLKSIQSKHKEGDYVCVSGKVKTMTKEDHFEIREYNVDMIADEKESCLH 1967
            FFRGTRFTN  FL+ +Q KHKEGD VCVSGKV+TM  +DH+E+REYN+D+I D+++S + 
Sbjct: 343  FFRGTRFTNVPFLRCLQEKHKEGDIVCVSGKVRTMRTKDHYEMREYNLDLIEDDQDSSVC 402

Query: 1966 GEGRPYPLYPSKGGLNPDFLREMISRVLRALSADIDPIPKDICEEFDLLSLYDAYMVIHH 1787
             +GRPY +YPSKGGLN +FLR++ISR L +L  +IDPIPKDI E+F LLSL+ AY+ IH 
Sbjct: 403  PKGRPYSIYPSKGGLNSNFLRDIISRALHSLPVNIDPIPKDIIEDFGLLSLHSAYVGIHQ 462

Query: 1786 PKNFNEADLARKRLLFDEFFYLQLGRLFQMLEPLGTRLEREGLLDRYRKSNLNGVLIEDW 1607
            PK+  EADLARKRL+FDEFFYLQLGRLFQ+LE LGT++E++GLLD+YRK  LN V +E+W
Sbjct: 463  PKDLKEADLARKRLIFDEFFYLQLGRLFQILEGLGTKIEKDGLLDKYRKPELNTVFVEEW 522

Query: 1606 SVLSHKMLKALPYSLTSSQLKAISEIIWDLKQPVPMYRLLQGDVGCGKTIVAFLACMEVI 1427
            S L+   LKALPYSLTSSQL A SEIIWDLK+PVPM RLLQGDVGCGKT+VAFLACMEVI
Sbjct: 523  SSLTKNFLKALPYSLTSSQLSAASEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVI 582

Query: 1426 GSGYQAAFMVPTELLAVQHYEHLHSLLNSID-EPCRPSIALLTGSTPARQSRIIRKGLQD 1250
            GSGYQAAFMVPTELLA+QHYE L +LL +++   C+PSIALLTGSTP++QSR+  KGLQ+
Sbjct: 583  GSGYQAAFMVPTELLALQHYEQLINLLENMEGAECKPSIALLTGSTPSKQSRMTHKGLQN 642

Query: 1249 GDISLVIGTHSLIAESIEFSTLRIAVIDEQHRFGVIQRGRFNSKLFPSSASLKKNAEDTD 1070
            GDISLVIGTHSLI+E +EFS LRIAV+DEQHRFGVIQRGRFNSKL+ +S S +     +D
Sbjct: 643  GDISLVIGTHSLISEKVEFSALRIAVVDEQHRFGVIQRGRFNSKLYYNSISSRMAEASSD 702

Query: 1069 ASFKDEVFMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRKPVETYIFEGNYAGN 890
               + +  MAPH+LAMSATPIPRTLALALYGDMSLTQITDLPPGR PVETY  EG  AG 
Sbjct: 703  VLSEGDTRMAPHILAMSATPIPRTLALALYGDMSLTQITDLPPGRTPVETYTIEGCDAGF 762

Query: 889  ESVYQMMQDELQSEGKIYIVYPIIEVSEQLPQLRAASSDLETISEKFDRYKCGLLHGKMK 710
            E VYQMM DEL+  GKIYIVYP+IE SEQLPQLRAAS+DLETIS +F  YKCGLLHG+MK
Sbjct: 763  EDVYQMMLDELEVGGKIYIVYPVIEQSEQLPQLRAASTDLETISSRFQGYKCGLLHGRMK 822

Query: 709  SDIKDEALRRFKSGETHILLSTQVVEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRG 530
            SD KDEALRRF+SGET+ILLSTQV+EIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRG
Sbjct: 823  SDEKDEALRRFRSGETNILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRG 882

Query: 529  TKKSKCIFLVSSASAMSRLKVLEKSSDGFHLANVXXXXXXXXXXXGKKQSGHLPEFPIAR 350
             +KSKC+ + S+AS ++RLKVLE SSDGF+LAN+           GKKQSGHLPEFPIAR
Sbjct: 883  VRKSKCLLVSSTASGLNRLKVLENSSDGFYLANMDLLLRGPGDLLGKKQSGHLPEFPIAR 942

Query: 349  LETDGNMLEEAYYAALKILGTSHDLECFPKLKAELSMRQPLCLLGD 212
            LE DGN+L+EA+ AALKILGTSHDLE FP+LKAELSMRQPLCLLGD
Sbjct: 943  LEIDGNILQEAHLAALKILGTSHDLEQFPELKAELSMRQPLCLLGD 988


>ref|XP_002526020.1| conserved hypothetical protein [Ricinus communis]
            gi|223534667|gb|EEF36360.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 983

 Score = 1149 bits (2971), Expect = 0.0
 Identities = 593/964 (61%), Positives = 735/964 (76%), Gaps = 22/964 (2%)
 Frame = -3

Query: 3037 AHKLLEEVNSYSTASIADRSKFLNKVSVLMGYDSVQDLLENERTQKKSGADFQDKLDEFD 2858
            A KLL++   Y   S++DRSK LNKV+ L+ YD   DL+EN +  ++SG D +D  D+FD
Sbjct: 22   AEKLLDQAYKYDMPSVSDRSKLLNKVTALVDYDGFHDLIENGKAGEQSGQDLKDATDDFD 81

Query: 2857 FSLAQRRFPSIIMGSSSPIYLFDEIGGKSERKSHMLDKSCQVCIPSSIGGELLDIERQRK 2678
             SLA +RFPSI +GSS P+ L+DE     E K+ +  +S +  +  ++G + +D +   +
Sbjct: 82   VSLACKRFPSITLGSSPPVELYDETTKPLEMKTLLAAESYKEFVSDALGMKWVDSDGFYE 141

Query: 2677 TGPTLDSPIVTNSSL--LEEKSSNILPISLRYP--------------ALQTDGKSVPNAT 2546
               + D+    N S+   E+  S  +    R                +L    + V   T
Sbjct: 142  QWTSADAVPSENYSIPKAEKDESACMTTESREEKTYLLEELKEESVNSLSVHSEDVTAET 201

Query: 2545 AENSPSTLAFESEQKATIVEMIL-----DKPLNTVPGISTKQCRQLENCGFHTVRKLLHH 2381
             E   +  + +      + E +L     D P++ +PG+S +Q  QLENCGFHT+RKLLHH
Sbjct: 202  KEKIDNIFSMQETSNKKVGESLLSAAFLDTPVSCIPGLSKRQHHQLENCGFHTLRKLLHH 261

Query: 2380 FPRTYADLQNAQGEVVDGNYIISIGKVLSSRGIRAGSSFSFLEIVVACDIANNLAASDCK 2201
            FPRTYADLQNA   V DG Y+IS+GK+LSSRG+RA  SFSFLE+VV C++A + +  +  
Sbjct: 262  FPRTYADLQNALVGVDDGQYLISVGKILSSRGVRASYSFSFLEVVVGCEVAIDESQHNTI 321

Query: 2200 NDYDSTDAKKTIYLHLKRFFRGTRFTNPYFLKSIQSKHKEGDYVCVSGKVKTMTKEDHFE 2021
             D DS + + TIYLHLK+FFRG RFTN  FLKS+ +KHK GD VC+SGKVKTM+ +DH+E
Sbjct: 322  -DTDSGETR-TIYLHLKKFFRGVRFTNQPFLKSLANKHKLGDVVCISGKVKTMSTKDHYE 379

Query: 2020 IREYNVDMIADEKESCLHGEGRPYPLYPSKGGLNPDFLREMISRVLRALSADIDPIPKDI 1841
            +REYN+D++ D+  S LH EGRPYP+YPSKGGLNPDFLR++I+R L+AL   IDPIPK+I
Sbjct: 380  MREYNIDVLKDDDVSSLHPEGRPYPIYPSKGGLNPDFLRDIIARALQALGPGIDPIPKEI 439

Query: 1840 CEEFDLLSLYDAYMVIHHPKNFNEADLARKRLLFDEFFYLQLGRLFQMLEPLGTRLEREG 1661
             ++F LL L+DAY  IH P+N  EAD AR+RL+FDEFFYLQLGRLFQMLE L TR E++G
Sbjct: 440  IQDFRLLHLHDAYTGIHQPRNVEEADSARRRLIFDEFFYLQLGRLFQMLEGLSTRTEKDG 499

Query: 1660 LLDRYRKSNLNGVLIEDWSVLSHKMLKALPYSLTSSQLKAISEIIWDLKQPVPMYRLLQG 1481
            LL +YRK  LN + +E+WS L+ K LKALPYSLTSSQL A+SEIIWDLK+PVPM RLLQG
Sbjct: 500  LLLKYRKPELNALYVENWSSLTKKFLKALPYSLTSSQLNAVSEIIWDLKRPVPMNRLLQG 559

Query: 1480 DVGCGKTIVAFLACMEVIGSGYQAAFMVPTELLAVQHYEHLHSLLNSIDE-PCRPSIALL 1304
            DVGCGKT+VAFLACMEVIGSGYQAAFMVPTELLA+QHYEHL  LL +++E   +PSIALL
Sbjct: 560  DVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAIQHYEHLLKLLETMEENQSKPSIALL 619

Query: 1303 TGSTPARQSRIIRKGLQDGDISLVIGTHSLIAESIEFSTLRIAVIDEQHRFGVIQRGRFN 1124
            TGSTP +QSR+IRK LQ GDIS+VIGTHSLI+E++EFS LRIAV+DEQHRFGVIQRG+FN
Sbjct: 620  TGSTPLKQSRMIRKDLQSGDISMVIGTHSLISENVEFSALRIAVVDEQHRFGVIQRGQFN 679

Query: 1123 SKLFPSSASLKKNAEDTDASFKDEVFMAPHVLAMSATPIPRTLALALYGDMSLTQITDLP 944
            SKL+ +S   +     +  S K +V+MAPH+LAMSATPIPRTLALALYGDMSLTQITDLP
Sbjct: 680  SKLYYTSLRSRMAVTTSIGSSKGDVYMAPHILAMSATPIPRTLALALYGDMSLTQITDLP 739

Query: 943  PGRKPVETYIFEGNYAGNESVYQMMQDELQSEGKIYIVYPIIEVSEQLPQLRAASSDLET 764
            PGR PVET+I EGN  G E +Y+M+ DEL++ G++Y+VYP+IE SEQLPQLRAAS+DL+ 
Sbjct: 740  PGRIPVETHIIEGNSQGFEDIYKMILDELEAGGRVYLVYPVIEQSEQLPQLRAASADLQA 799

Query: 763  ISEKFDRYKCGLLHGKMKSDIKDEALRRFKSGETHILLSTQVVEIGVDVPDASMMVVMNA 584
            IS++F R+ CGLLHG+MKSD KDEALRRF+SGET ILLSTQV+E+GVDVPDASMMVVMNA
Sbjct: 800  ISDRFQRFNCGLLHGRMKSDEKDEALRRFRSGETQILLSTQVIEVGVDVPDASMMVVMNA 859

Query: 583  ERFGIAQLHQLRGRVGRGTKKSKCIFLVSSASAMSRLKVLEKSSDGFHLANVXXXXXXXX 404
            ERFGIAQLHQLRGRVGRG +KSKCI L S++S+++RLKVLEKSSDGFHLAN         
Sbjct: 860  ERFGIAQLHQLRGRVGRGERKSKCILLGSTSSSLNRLKVLEKSSDGFHLANADLLLRGPG 919

Query: 403  XXXGKKQSGHLPEFPIARLETDGNMLEEAYYAALKILGTSHDLECFPKLKAELSMRQPLC 224
               GKKQSGHLP+FPIARLE  G +L+EA+ AALK+LG SHDLE FP+LKAELSMRQPLC
Sbjct: 920  DLLGKKQSGHLPDFPIARLEIVGKILQEAHDAALKVLGDSHDLERFPELKAELSMRQPLC 979

Query: 223  LLGD 212
            LLGD
Sbjct: 980  LLGD 983


>ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|222863848|gb|EEF00979.1|
            predicted protein [Populus trichocarpa]
          Length = 888

 Score = 1132 bits (2929), Expect = 0.0
 Identities = 588/917 (64%), Positives = 716/917 (78%), Gaps = 4/917 (0%)
 Frame = -3

Query: 2950 MGYDSVQDLLENERTQKKSGADFQDKLDEFDFSLAQRRFPSIIMGSSSPIYLFDEIGGKS 2771
            M YD   DL+ENE   K+   + +D  D+FD SLA +RFPSI++GSS P+ L+DE    S
Sbjct: 1    MDYDGFHDLIENETAAKQFRGNAKDDTDDFDVSLACKRFPSIVLGSSPPVELYDE----S 56

Query: 2770 ERKSHMLDKSCQVCIPSSIGGELLDIE--RQRKTGPTLDSPIVTNSSLLEEKSSNILPIS 2597
            E  S +  K  +  +P+++G + +D +   ++ T P  ++    NSS+ +E    I    
Sbjct: 57   EINSLLAAKILEGFLPNAMGVKCVDPDTLHEQLTSPHTEN---VNSSMPKELREKI---- 109

Query: 2596 LRYPALQTDGKSVPNATAENSPSTLAFESEQKATIVEMILDKPLNTVPGISTKQCRQLEN 2417
                        V     E   + +  ES+         LDKP++ +PG+ST+Q RQLEN
Sbjct: 110  ------------VSKIGMEEYTTKVELESQVNLAY----LDKPISCLPGLSTRQRRQLEN 153

Query: 2416 CGFHTVRKLLHHFPRTYADLQNAQGEVVDGNYIISIGKVLSSRGIRAGSSFSFLEIVVAC 2237
            CGF+T+RKLL HFPRTYADLQNA   + DG Y+IS+GKV SSR ++A  S +F E++VAC
Sbjct: 154  CGFYTLRKLLQHFPRTYADLQNAHFGIDDGQYLISVGKVTSSRAVKASYSLAFAEVIVAC 213

Query: 2236 DIANNLAASDCKNDYDSTDAKKTIYLHLKRFFRGTRFTNPYFLKSIQSKHKEGDYVCVSG 2057
            +I NN   S    D +++  KKTIYLHLK++FRGTRFT   FLK +++KHK GD VCVSG
Sbjct: 214  EIINN--ESKHLIDDNNSGGKKTIYLHLKKYFRGTRFTCLPFLKKVEAKHKLGDVVCVSG 271

Query: 2056 KVKTM-TKEDHFEIREYNVDMIADEKESCLHGEGRPYPLYPSKGGLNPDFLREMISRVLR 1880
            KV+TM TK DH+EIREYN+D++ D ++S    EGRPYP+YPSKGGLNPDFLR+ ISR +R
Sbjct: 272  KVRTMSTKGDHYEIREYNIDVLEDREDSSSIVEGRPYPIYPSKGGLNPDFLRDTISRAVR 331

Query: 1879 ALSADIDPIPKDICEEFDLLSLYDAYMVIHHPKNFNEADLARKRLLFDEFFYLQLGRLFQ 1700
            AL AD+DPIPK+I ++F LL L++AY+ IH PKN +EADLARKRL+FDEFFYLQLGRLFQ
Sbjct: 332  ALLADVDPIPKEIIQDFGLLRLHEAYIGIHQPKNADEADLARKRLIFDEFFYLQLGRLFQ 391

Query: 1699 MLEPLGTRLEREGLLDRYRKSNLNGVLIEDWSVLSHKMLKALPYSLTSSQLKAISEIIWD 1520
            MLE LG+R+E++GLLD+Y K  LN V +E+WS L+ K LKALPYSLTSSQL A S+IIWD
Sbjct: 392  MLEGLGSRMEKDGLLDKYSKPELNAVYVEEWSNLTKKFLKALPYSLTSSQLSASSQIIWD 451

Query: 1519 LKQPVPMYRLLQGDVGCGKTIVAFLACMEVIGSGYQAAFMVPTELLAVQHYEHLHSLLNS 1340
            LK+PVPM RLLQGDVGCGKTIVAFLACMEVIGSGYQAAFMVPTELLA+QHYE L +LL +
Sbjct: 452  LKRPVPMNRLLQGDVGCGKTIVAFLACMEVIGSGYQAAFMVPTELLAIQHYEQLLNLLET 511

Query: 1339 IDE-PCRPSIALLTGSTPARQSRIIRKGLQDGDISLVIGTHSLIAESIEFSTLRIAVIDE 1163
            + E   +PS+ALLTGSTP++QSR+IR+ LQ GDIS+VIGTHSLI+E++EFS LRIAV+DE
Sbjct: 512  MGEVQSKPSVALLTGSTPSKQSRMIRRDLQSGDISMVIGTHSLISENVEFSALRIAVVDE 571

Query: 1162 QHRFGVIQRGRFNSKLFPSSASLKKNAEDTDASFKDEVFMAPHVLAMSATPIPRTLALAL 983
            Q RFGVIQRGRFNSKL+ S  S + +A +TD S + +  MAPHVLAMSATPIPRTLALAL
Sbjct: 572  QQRFGVIQRGRFNSKLYHSPLSSRMSASNTDTSSEGDFHMAPHVLAMSATPIPRTLALAL 631

Query: 982  YGDMSLTQITDLPPGRKPVETYIFEGNYAGNESVYQMMQDELQSEGKIYIVYPIIEVSEQ 803
            YGDMSLTQITDLPPGR PVETYIFEGNY G E VY+MM+DEL++ G++Y+VYP+IE SEQ
Sbjct: 632  YGDMSLTQITDLPPGRVPVETYIFEGNYDGFEDVYKMMRDELEAGGRVYLVYPVIEQSEQ 691

Query: 802  LPQLRAASSDLETISEKFDRYKCGLLHGKMKSDIKDEALRRFKSGETHILLSTQVVEIGV 623
            LPQLRAA++DLE IS +F  Y CGLLHGKMKSD KDEAL+RF+SG THILLSTQV+EIGV
Sbjct: 692  LPQLRAAAADLEVISHRFQDYNCGLLHGKMKSDDKDEALKRFRSGVTHILLSTQVIEIGV 751

Query: 622  DVPDASMMVVMNAERFGIAQLHQLRGRVGRGTKKSKCIFLVSSASAMSRLKVLEKSSDGF 443
            DVPDASMMVVMNAERFGIAQLHQLRGRVGRG +KSKC+ + S+ S++ RLKVLEKSSDGF
Sbjct: 752  DVPDASMMVVMNAERFGIAQLHQLRGRVGRGARKSKCLLVASTTSSLDRLKVLEKSSDGF 811

Query: 442  HLANVXXXXXXXXXXXGKKQSGHLPEFPIARLETDGNMLEEAYYAALKILGTSHDLECFP 263
            +LAN+           GKKQSGHLPEFPIARLE DGN+L+EA+ AALK+LG SHDLE FP
Sbjct: 812  YLANMDLLLRGPGDLLGKKQSGHLPEFPIARLEIDGNILQEAHAAALKVLGESHDLERFP 871

Query: 262  KLKAELSMRQPLCLLGD 212
             LKAELSMRQPLCLLGD
Sbjct: 872  ALKAELSMRQPLCLLGD 888


>ref|NP_178253.3| ATP-dependent DNA helicase RecG [Arabidopsis thaliana]
            gi|330250357|gb|AEC05451.1| ATP-dependent DNA helicase
            RecG [Arabidopsis thaliana]
          Length = 973

 Score = 1077 bits (2785), Expect = 0.0
 Identities = 556/992 (56%), Positives = 716/992 (72%), Gaps = 1/992 (0%)
 Frame = -3

Query: 3184 LCCNEKNLKNAISFEVEKGYPNAVGGTMRFSNFXXXXXXXXXXXXXXXSAHKLLEEVNSY 3005
            +CC  + L++ I  + ++G  N +    R SNF                +  LLE+V  Y
Sbjct: 11   MCCGSRRLRSVIVIQAQRGNWNRI----RLSNFFFSKVWNISYRSKHKYSDNLLEQVEKY 66

Query: 3004 STASIADRSKFLNKVSVLMGYDSVQDLLENERTQKKSGADFQDKLDEFDFSLAQRRFPSI 2825
            ++A + ++SK + KV+ LM  D+V D ++     KKS     D+  + D  LA +RFPSI
Sbjct: 67   ASARLENQSKLITKVAALMECDNVDDFID-----KKS-----DEQVKKDLVLACKRFPSI 116

Query: 2824 IMGSSSPIYLFDEIGGKSERKSHMLDKSCQVCIPSSIGGELLDIERQRKTGPTLDSPIVT 2645
            I+G S P+ L+       E  S +   +    +P+ + G   D +   +T  +    ++ 
Sbjct: 117  ILGDSRPVELYSNSKSYGESSSILKTPTDNSFLPTPMHGGWFDPDNLSRTLSSFCPELLQ 176

Query: 2644 NSSLLEEKSSNILPISLRYPALQTDGKSVPNATAENSPSTLAFESEQKATIVEMILDKPL 2465
            N    + +             +  DG S  + TA +        +       +  L   +
Sbjct: 177  NDDSSDPRED-----------ILDDGSSFTSKTATSEVEA----TSDDVFAAQRFLATSI 221

Query: 2464 NTVPGISTKQCRQLENCGFHTVRKLLHHFPRTYADLQNAQGEVVDGNYIISIGKVLSSRG 2285
            +++PG+S +   QL++CGFHT++KLLHHFPRTYADLQNAQ ++ DG Y+I +GKVLSS+G
Sbjct: 222  DSMPGLSKRHSNQLDSCGFHTMKKLLHHFPRTYADLQNAQVDIEDGQYLIFVGKVLSSKG 281

Query: 2284 IRAGSSFSFLEIVVACDIANNLAASDCKNDYDSTDAKKTIYLHLKRFFRGTRFTNPYFLK 2105
            +RA SSFSFLE++V+C+++      +  +      A K+I+LHLK+FFRGTRFT   FL 
Sbjct: 282  VRASSSFSFLEVIVSCEVSGRDRTPEDLSHNAEDKAGKSIFLHLKKFFRGTRFTWQPFLN 341

Query: 2104 SIQSKHKEGDYVCVSGKVKTMTKEDHFEIREYNVDMIADEKESCLHGEGRPYPLYPSKGG 1925
            SIQ KHK GD VC+SGKVK++  EDHFE+REYN+D++ DE+ES    +GRPYP+YPSKGG
Sbjct: 342  SIQEKHKVGDLVCISGKVKSLRAEDHFEMREYNIDVLKDEEESSHRAQGRPYPIYPSKGG 401

Query: 1924 LNPDFLREMISRVLRALSADIDPIPKDICEEFDLLSLYDAYMVIHHPKNFNEADLARKRL 1745
            LNP FL ++ISR LR L A++DPIPK+I + F L SL DAY+ IH PK  +EADLARKRL
Sbjct: 402  LNPKFLSDVISRALRVLPANMDPIPKEITKVFGLPSLNDAYVGIHEPKTLDEADLARKRL 461

Query: 1744 LFDEFFYLQLGRLFQMLEPLGTRLEREGLLDRYRKSNLNGVLIEDWSVLSHKMLKALPYS 1565
            +FDEFFYLQL RL+QML+ LGT++E++ LL+++RK  LN V IE+WS L+   LKALPYS
Sbjct: 462  IFDEFFYLQLARLYQMLQSLGTKIEKDVLLEKFRKPVLNSVYIEEWSTLTKSFLKALPYS 521

Query: 1564 LTSSQLKAISEIIWDLKQPVPMYRLLQGDVGCGKTIVAFLACMEVIGSGYQAAFMVPTEL 1385
            LT SQL A+SEIIWDLK+PVPM RLLQGDVGCGKT+VAFLACMEVIGSGYQAAFM PTEL
Sbjct: 522  LTPSQLSAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMAPTEL 581

Query: 1384 LAVQHYEHLHSLLNSIDE-PCRPSIALLTGSTPARQSRIIRKGLQDGDISLVIGTHSLIA 1208
            LA+QHYE    LL +++    +P+I LLTGSTPA+QSR+IR+ LQ G IS +IGTHSLIA
Sbjct: 582  LAIQHYEQCRDLLENMEGVSSKPTIGLLTGSTPAKQSRMIRQDLQSGAISFIIGTHSLIA 641

Query: 1207 ESIEFSTLRIAVIDEQHRFGVIQRGRFNSKLFPSSASLKKNAEDTDASFKDEVFMAPHVL 1028
            E IE+S LRIAV+DEQ RFGVIQRG+FNSKL+ +S   K  + D+D + K ++ MAPHVL
Sbjct: 642  EKIEYSALRIAVVDEQQRFGVIQRGKFNSKLYGTSMISKSGSSDSDDTSKADLSMAPHVL 701

Query: 1027 AMSATPIPRTLALALYGDMSLTQITDLPPGRKPVETYIFEGNYAGNESVYQMMQDELQSE 848
            AMSATPIPR+LALALYGD+SLTQIT +P GR PVET+IFEGN  G + VY MM ++L+S 
Sbjct: 702  AMSATPIPRSLALALYGDISLTQITGMPLGRIPVETHIFEGNETGIKEVYSMMLEDLKSG 761

Query: 847  GKIYIVYPIIEVSEQLPQLRAASSDLETISEKFDRYKCGLLHGKMKSDIKDEALRRFKSG 668
            G++Y+VYP+I+ SEQLPQLRAAS++LE +++KF +Y CGLLHG+MKSD K+EAL +F+SG
Sbjct: 762  GRVYVVYPVIDQSEQLPQLRAASAELEIVTKKFPKYNCGLLHGRMKSDDKEEALNKFRSG 821

Query: 667  ETHILLSTQVVEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGTKKSKCIFLVSSAS 488
            ET ILLSTQV+EIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGT+KSKC+ + SS +
Sbjct: 822  ETQILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGTRKSKCLLVGSSTN 881

Query: 487  AMSRLKVLEKSSDGFHLANVXXXXXXXXXXXGKKQSGHLPEFPIARLETDGNMLEEAYYA 308
            ++ RL +L KSSDGF+LAN+           GKKQSGHLPEFP+ARLE DGNML+EA+ A
Sbjct: 882  SLKRLNMLGKSSDGFYLANIDLLLRGPGDLLGKKQSGHLPEFPVARLEIDGNMLQEAHIA 941

Query: 307  ALKILGTSHDLECFPKLKAELSMRQPLCLLGD 212
            AL +LG SHDLE FP LKAELSMRQPLCLLGD
Sbjct: 942  ALNVLGDSHDLEKFPALKAELSMRQPLCLLGD 973