BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015388
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...   107   3e-21
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]   107   3e-21
ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus ...    99   9e-19
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    94   2e-17
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    83   5e-14

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score =  107 bits (267), Expect = 3e-21
 Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
 Frame = +3

Query: 171 EEAIQDKDMISGLPDSVLVHILSFLPMEDVARTGTLSRRWDHVWNKVRHLYFNGPISRKR 350
           EE    KD IS L DS+L+ ILSFLPM+ V  T  LS+RW  +W  V +L F     R+R
Sbjct: 67  EEISSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVFR---FRRR 123

Query: 351 EEQVKFISFVNHTLSLLECGSIQEFSLDFDKSSPEAMNXXXXXXXXTFGLHVDRWVRCAV 530
           +E   F++ ++ TL L +   I++F +DF   S              F   V+ W+R A 
Sbjct: 124 DEH--FVNSIDKTLVLHQNSQIKKFLIDFTYQS-------------QFQSSVNVWIRHAT 168

Query: 531 RKNVEVLYLNFSYNPS-EGPLFGVPYRLPCHIFSNDSITELMLCFCSMNPTKPILWNNLK 707
           RKNVE L+L F              + LP  +++N SI +L L FC++ PT  I W +LK
Sbjct: 169 RKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLK 228

Query: 708 SLFLYNIQL 734
           +L + +++L
Sbjct: 229 TLSIGSVEL 237


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score =  107 bits (267), Expect = 3e-21
 Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
 Frame = +3

Query: 171 EEAIQDKDMISGLPDSVLVHILSFLPMEDVARTGTLSRRWDHVWNKVRHLYFNGPISRKR 350
           EE    KD IS L DS+L+ ILSFLPM+ V  T  LS+RW  +W  V +L F     R+R
Sbjct: 67  EEISSRKDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVFR---FRRR 123

Query: 351 EEQVKFISFVNHTLSLLECGSIQEFSLDFDKSSPEAMNXXXXXXXXTFGLHVDRWVRCAV 530
           +E   F++ ++ TL L +   I++F +DF   S              F   V+ W+R A 
Sbjct: 124 DEH--FVNSIDKTLVLHQNSQIKKFLIDFTYQS-------------QFQSSVNVWIRHAT 168

Query: 531 RKNVEVLYLNFSYNPS-EGPLFGVPYRLPCHIFSNDSITELMLCFCSMNPTKPILWNNLK 707
           RKNVE L+L F              + LP  +++N SI +L L FC++ PT  I W +LK
Sbjct: 169 RKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLK 228

Query: 708 SLFLYNIQL 734
           +L + +++L
Sbjct: 229 TLSIGSVEL 237


>ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544381|gb|EEF45902.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 348

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
 Frame = +3

Query: 174 EAIQDKDMISGLPDSVLVHILSFL-PMEDVARTGTLSRRWDHVWNKVRHLYFNGPISRKR 350
           ++  ++D IS LPD+++ HILSFL   E+  +TG LS+RW   W  V++L FN P     
Sbjct: 15  KSCDEEDGISSLPDTLIHHILSFLLSTEEAVKTGILSKRWRDQWTYVQNLNFNYPYCFSD 74

Query: 351 EEQVKFISFVNHTLSLLECGSIQEFSLDFDKSSPEAMNXXXXXXXXTFGLHVDRWVRCAV 530
           E+   F  F+++TL L  C  I +FS+    SS + M+         +   +   +R A+
Sbjct: 75  EKLKCFSKFIHNTLVLNSCSKINKFSISPRLSSDKYMS--------EYQSQISLCMRFAI 126

Query: 531 RKNVEVLYLNFSYNPSEGPLFGVPYRLPCHIFSNDSITELMLCFCSMNPTKPILWNNLKS 710
           +K  +VL L+F  +PS        YRLP   +SNDS+TE+ L  C  +    + W +LK 
Sbjct: 127 KKEAKVLTLDF--HPS-----NQGYRLPQFFYSNDSVTEMTLSSCGFSLNADVNWRSLKV 179

Query: 711 L 713
           L
Sbjct: 180 L 180


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
 Frame = +3

Query: 147 RQKKCRLIEEAIQDKDMISGLPDSVLVHILSFLPMEDVARTGTLSRRWDHVWNKVRHLYF 326
           R + C+   +  Q  D IS LPD ++ HILSFLP +D  +T  LS+RWD +W  V +L F
Sbjct: 32  RPRSCQ--NKECQKVDRISNLPDPIIQHILSFLPADDAIKTCILSKRWDSIWTLVPNLIF 89

Query: 327 NGPISRKREEQVKFISFVNHTLSLLECGSIQEFSLDFDKSSPEAMNXXXXXXXXTFGLHV 506
               S  +E +  F  FV+  L       +++F ++F+ +               F   V
Sbjct: 90  RRECSCSQEAE-NFAVFVDKALMHYCSPKVKKFLVEFEFTE-------------CFKAQV 135

Query: 507 DRWVRCAVRKNVEVLYLNFSYNPSEGPLFGVPYRLPCHIFSNDSITELMLCFCSMNPT-- 680
           D WV  AVR  VE L L F    ++ P +   Y LP  ++SN    +L L FC+++P   
Sbjct: 136 DSWVDFAVRLKVEELCLEFHREIADDPDY---YYLPNFLYSNIPAEKLSLRFCALSPNKL 192

Query: 681 KPILWNNLKSL 713
           K + W +LK L
Sbjct: 193 KQVSWMSLKVL 203


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 65/182 (35%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
 Frame = +3

Query: 192 DMISGLPDSVLVHILSFLPMEDVARTGTLSRRWDHVWNKVRHLYFNGPISRKREEQVKFI 371
           D IS LPD VLVHILSFLPM+   RTG LS+R+ + W    +L F+     + ++   FI
Sbjct: 35  DRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVFDQDSEWEIDD---FI 91

Query: 372 SFVNHTLSLLECG-SIQEFSLDFDKSSPEAMNXXXXXXXXTFGLHVDRWVRCAVRKNVEV 548
           +FVN  L L +    +Q+F++  D       N             V  W+R A RK VE 
Sbjct: 92  TFVNRALLLHDPNCKVQKFTIYMDCMDQVIENSLQEDC-------VTLWLRFATRKGVE- 143

Query: 549 LYLNFSYNPSEGPL-------FGVPYRLPCHIFSNDSITELMLCFCSMNPTKPILWNNLK 707
             LN  +N  E PL           Y LP  IF + S  +L   FC+      + W  LK
Sbjct: 144 -KLNLGFNDEEDPLQLWESRYDSYRYLLPQFIFRHSSFRKLATRFCNFVTYGVVSWAWLK 202

Query: 708 SL 713
           SL
Sbjct: 203 SL 204