BLASTX nr result

ID: Cimicifuga21_contig00015387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015387
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002969088.1| hypothetical protein SELMODRAFT_90860 [Selag...    59   4e-07
ref|XP_002322534.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...    58   9e-07
ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...    58   9e-07
ref|XP_002520562.1| ubiquitin specific protease 39 and snrnp ass...    58   9e-07

>ref|XP_002969088.1| hypothetical protein SELMODRAFT_90860 [Selaginella moellendorffii]
           gi|302784408|ref|XP_002973976.1| hypothetical protein
           SELMODRAFT_100186 [Selaginella moellendorffii]
           gi|300158308|gb|EFJ24931.1| hypothetical protein
           SELMODRAFT_100186 [Selaginella moellendorffii]
           gi|300163593|gb|EFJ30204.1| hypothetical protein
           SELMODRAFT_90860 [Selaginella moellendorffii]
          Length = 458

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -1

Query: 390 EMQDLHVAETLPQMVALSEAYMQIYEQQQ 304
           EMQDLHV ETLPQMVALSEAYMQIYEQQQ
Sbjct: 430 EMQDLHVTETLPQMVALSEAYMQIYEQQQ 458


>ref|XP_002322534.1| predicted protein [Populus trichocarpa] gi|222867164|gb|EEF04295.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -1

Query: 390 EMQDLHVAETLPQMVALSEAYMQIYEQQQ 304
           EMQDLHV+ETLPQMVALSEAY+QIYEQQQ
Sbjct: 502 EMQDLHVSETLPQMVALSEAYLQIYEQQQ 530


>ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
           sativus]
          Length = 550

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -1

Query: 390 EMQDLHVAETLPQMVALSEAYMQIYEQQQ 304
           EMQDLHV+ETLPQMVALSEAYMQIYE+QQ
Sbjct: 522 EMQDLHVSETLPQMVALSEAYMQIYERQQ 550


>ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
           sativus]
          Length = 550

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -1

Query: 390 EMQDLHVAETLPQMVALSEAYMQIYEQQQ 304
           EMQDLHV+ETLPQMVALSEAYMQIYE+QQ
Sbjct: 522 EMQDLHVSETLPQMVALSEAYMQIYERQQ 550


>ref|XP_002520562.1| ubiquitin specific protease 39 and snrnp assembly factor, putative
           [Ricinus communis] gi|223540222|gb|EEF41795.1| ubiquitin
           specific protease 39 and snrnp assembly factor, putative
           [Ricinus communis]
          Length = 557

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -1

Query: 390 EMQDLHVAETLPQMVALSEAYMQIYEQQQ 304
           EMQDLHV+ETLPQMVALSEAY+QIYEQQQ
Sbjct: 529 EMQDLHVSETLPQMVALSEAYVQIYEQQQ 557


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